Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0947:0948
Extra
PDB:
ATOM 1 O3' C A 946 64.428 57.041 120.847 1.00 75.00 O
ATOM 2 P G A 947 65.849 57.142 121.591 1.00 77.06 P
ATOM 3 OP1 G A 947 65.599 57.158 123.062 1.00 74.76 O
ATOM 4 OP2 G A 947 66.641 58.238 120.973 1.00 75.90 O
ATOM 5 O5' G A 947 66.515 55.751 121.184 1.00 80.16 O
ATOM 6 C5' G A 947 66.875 54.799 122.185 1.00 87.65 C
ATOM 7 C4' G A 947 66.611 53.385 121.720 1.00 90.91 C
ATOM 8 O4' G A 947 67.165 52.492 122.728 1.00 96.04 O
ATOM 9 C3' G A 947 65.154 52.963 121.551 1.00 91.29 C
ATOM 10 O3' G A 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 11 C2' G A 947 65.160 51.520 122.043 1.00 95.65 C
ATOM 12 O2' G A 947 65.633 50.613 121.065 1.00 97.30 O
ATOM 13 C1' G A 947 66.161 51.612 123.196 1.00 99.13 C
ATOM 14 N9 G A 947 65.631 52.161 124.448 1.00104.04 N
ATOM 15 C8 G A 947 66.366 52.563 125.541 1.00105.08 C
ATOM 16 N7 G A 947 65.630 53.025 126.516 1.00107.12 N
ATOM 17 C5 G A 947 64.326 52.923 126.045 1.00108.95 C
ATOM 18 C6 G A 947 63.091 53.276 126.663 1.00110.34 C
ATOM 19 O6 G A 947 62.901 53.767 127.787 1.00110.37 O
ATOM 20 N1 G A 947 62.005 53.005 125.827 1.00111.70 N
ATOM 21 C2 G A 947 62.091 52.466 124.560 1.00111.32 C
ATOM 22 N2 G A 947 60.927 52.283 123.903 1.00110.77 N
ATOM 23 N3 G A 947 63.234 52.134 123.977 1.00109.89 N
ATOM 24 C4 G A 947 64.305 52.388 124.770 1.00107.84 C
ATOM 25 P A A 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 26 OP1 A A 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 27 OP2 A A 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 28 O5' A A 948 63.139 52.699 118.242 1.00 78.02 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
ATOM 2 P G A 947 65.849 57.142 121.591 1.00 77.06 P
ATOM 3 OP1 G A 947 65.599 57.158 123.062 1.00 74.76 O
ATOM 4 OP2 G A 947 66.641 58.238 120.973 1.00 75.90 O
ATOM 5 O5' G A 947 66.515 55.751 121.184 1.00 80.16 O
ATOM 6 C5' G A 947 66.875 54.799 122.185 1.00 87.65 C
ATOM 7 C4' G A 947 66.611 53.385 121.720 1.00 90.91 C
ATOM 8 O4' G A 947 67.165 52.492 122.728 1.00 96.04 O
ATOM 9 C3' G A 947 65.154 52.963 121.551 1.00 91.29 C
ATOM 10 O3' G A 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 11 C2' G A 947 65.160 51.520 122.043 1.00 95.65 C
ATOM 12 O2' G A 947 65.633 50.613 121.065 1.00 97.30 O
ATOM 13 C1' G A 947 66.161 51.612 123.196 1.00 99.13 C
ATOM 14 N9 G A 947 65.631 52.161 124.448 1.00104.04 N
ATOM 15 C8 G A 947 66.366 52.563 125.541 1.00105.08 C
ATOM 16 N7 G A 947 65.630 53.025 126.516 1.00107.12 N
ATOM 17 C5 G A 947 64.326 52.923 126.045 1.00108.95 C
ATOM 18 C6 G A 947 63.091 53.276 126.663 1.00110.34 C
ATOM 19 O6 G A 947 62.901 53.767 127.787 1.00110.37 O
ATOM 20 N1 G A 947 62.005 53.005 125.827 1.00111.70 N
ATOM 21 C2 G A 947 62.091 52.466 124.560 1.00111.32 C
ATOM 22 N2 G A 947 60.927 52.283 123.903 1.00110.77 N
ATOM 23 N3 G A 947 63.234 52.134 123.977 1.00109.89 N
ATOM 24 C4 G A 947 64.305 52.388 124.770 1.00107.84 C
ATOM 25 P A A 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 26 OP1 A A 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 27 OP2 A A 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 28 O5' A A 948 63.139 52.699 118.242 1.00 78.02 O
TER
ATOM 1 O3' G B 947 64.691 53.069 120.207 1.00 85.78 O
ATOM 2 P A B 948 63.222 52.517 119.821 1.00 82.89 P
ATOM 3 OP1 A B 948 62.205 53.397 120.450 1.00 83.26 O
ATOM 4 OP2 A B 948 63.179 51.059 120.085 1.00 83.92 O
ATOM 5 O5' A B 948 63.139 52.699 118.242 1.00 78.02 O
ATOM 6 C5' A B 948 63.737 51.737 117.353 1.00 69.50 C
ATOM 7 C4' A B 948 64.066 52.381 116.027 1.00 64.24 C
ATOM 8 O4' A B 948 62.847 52.874 115.409 1.00 62.69 O
ATOM 9 C3' A B 948 64.970 53.598 116.102 1.00 60.42 C
ATOM 10 O3' A B 948 66.335 53.211 116.180 1.00 57.61 O
ATOM 11 C2' A B 948 64.622 54.331 114.816 1.00 60.83 C
ATOM 12 O2' A B 948 65.240 53.758 113.683 1.00 59.43 O
ATOM 13 C1' A B 948 63.109 54.097 114.742 1.00 62.00 C
ATOM 14 N9 A B 948 62.314 55.148 115.390 1.00 63.40 N
ATOM 15 C8 A B 948 61.479 55.023 116.478 1.00 62.97 C
ATOM 16 N7 A B 948 60.913 56.147 116.843 1.00 62.54 N
ATOM 17 C5 A B 948 61.402 57.078 115.936 1.00 62.04 C
ATOM 18 C6 A B 948 61.182 58.456 115.786 1.00 61.18 C
ATOM 19 N6 A B 948 60.388 59.173 116.578 1.00 60.93 N
ATOM 20 N1 A B 948 61.816 59.084 114.779 1.00 62.28 N
ATOM 21 C2 A B 948 62.613 58.370 113.979 1.00 62.94 C
ATOM 22 N3 A B 948 62.903 57.075 114.016 1.00 62.65 N
ATOM 23 C4 A B 948 62.259 56.476 115.032 1.00 62.89 C
ATOM 24 P C B 949 67.457 54.302 116.538 1.00 55.82 P
ATOM 25 OP1 C B 949 68.610 53.619 117.169 1.00 56.01 O
ATOM 26 OP2 C B 949 66.802 55.429 117.240 1.00 56.81 O
ATOM 27 O5' C B 949 67.951 54.791 115.111 1.00 56.27 O
TER
Atoms:
OP1: (65.599,57.158,123.062)
OP2: (66.641,58.238,120.973)
C3': (65.154,52.963,121.551)
C1': (66.161,51.612,123.196)
C5': (66.875,54.799,122.185)
O6: (62.901,53.767,127.787)
O4': (67.165,52.492,122.728)
C8: (66.366,52.563,125.541)
C2: (62.091,52.466,124.560)
C6: (63.091,53.276,126.663)
C5: (64.326,52.923,126.045)
C4: (64.305,52.388,124.770)
P: (65.849,57.142,121.591)
C4': (66.611,53.385,121.720)
C2': (65.160,51.520,122.043)
O2': (65.633,50.613,121.065)
N1: (62.005,53.005,125.827)
N2: (60.927,52.283,123.903)
N3: (63.234,52.134,123.977)
N7: (65.630,53.025,126.516)
N9: (65.631,52.161,124.448)
O5': (66.515,55.751,121.184)
O3': (64.691,53.069,120.207)
OP2: (66.641,58.238,120.973)
C3': (65.154,52.963,121.551)
C1': (66.161,51.612,123.196)
C5': (66.875,54.799,122.185)
O6: (62.901,53.767,127.787)
O4': (67.165,52.492,122.728)
C8: (66.366,52.563,125.541)
C2: (62.091,52.466,124.560)
C6: (63.091,53.276,126.663)
C5: (64.326,52.923,126.045)
C4: (64.305,52.388,124.770)
P: (65.849,57.142,121.591)
C4': (66.611,53.385,121.720)
C2': (65.160,51.520,122.043)
O2': (65.633,50.613,121.065)
N1: (62.005,53.005,125.827)
N2: (60.927,52.283,123.903)
N3: (63.234,52.134,123.977)
N7: (65.630,53.025,126.516)
N9: (65.631,52.161,124.448)
O5': (66.515,55.751,121.184)
O3': (64.691,53.069,120.207)
OP1: (62.205,53.397,120.450)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
OP2: (63.179,51.059,120.085)
C3': (64.970,53.598,116.102)
C1': (63.109,54.097,114.742)
C5': (63.737,51.737,117.353)
O4': (62.847,52.874,115.409)
C8: (61.479,55.023,116.478)
O2': (65.240,53.758,113.683)
C6: (61.182,58.456,115.786)
C5: (61.402,57.078,115.936)
C4: (62.259,56.476,115.032)
P: (63.222,52.517,119.821)
C4': (64.066,52.381,116.027)
C2': (64.622,54.331,114.816)
C2: (62.613,58.370,113.979)
N1: (61.816,59.084,114.779)
N3: (62.903,57.075,114.016)
N6: (60.388,59.173,116.578)
N7: (60.913,56.147,116.843)
N9: (62.314,55.148,115.390)
O5': (63.139,52.699,118.242)
O3': (66.335,53.211,116.180)
Image (generated by PyMOL):