Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2231:A2069
Extra
PDB:
ATOM 1 O3' G A2230 -76.471 -25.903 35.026 1.00 0.01 O
ATOM 2 P G A2231 -77.415 -25.792 33.728 1.00 0.02 P
ATOM 3 OP1 G A2231 -76.771 -24.831 32.771 1.00 0.02 O
ATOM 4 OP2 G A2231 -78.792 -25.504 34.217 1.00 0.02 O
ATOM 5 O5' G A2231 -77.344 -27.249 33.129 1.00 0.02 O
ATOM 6 C5' G A2231 -76.805 -27.452 31.840 1.00 0.02 C
ATOM 7 C4' G A2231 -75.543 -28.265 31.897 1.00 0.02 C
ATOM 8 O4' G A2231 -75.823 -29.506 32.606 1.00 0.02 O
ATOM 9 C3' G A2231 -74.991 -28.667 30.542 1.00 0.02 C
ATOM 10 O3' G A2231 -73.573 -28.794 30.621 1.00 0.02 O
ATOM 11 C2' G A2231 -75.634 -30.040 30.325 1.00 0.02 C
ATOM 12 O2' G A2231 -74.927 -30.903 29.472 1.00 0.02 O
ATOM 13 C1' G A2231 -75.703 -30.603 31.732 1.00 0.02 C
ATOM 14 N9 G A2231 -76.852 -31.462 31.941 1.00 0.01 N
ATOM 15 C8 G A2231 -76.874 -32.688 32.549 1.00 0.01 C
ATOM 16 N7 G A2231 -78.049 -33.244 32.590 1.00 0.01 N
ATOM 17 C5 G A2231 -78.842 -32.310 31.964 1.00 0.01 C
ATOM 18 C6 G A2231 -80.224 -32.367 31.725 1.00 0.01 C
ATOM 19 O6 G A2231 -81.033 -33.260 32.022 1.00 0.01 O
ATOM 20 N1 G A2231 -80.642 -31.222 31.077 1.00 0.01 N
ATOM 21 C2 G A2231 -79.847 -30.186 30.706 1.00 0.01 C
ATOM 22 N2 G A2231 -80.500 -29.212 30.090 1.00 0.01 N
ATOM 23 N3 G A2231 -78.560 -30.115 30.917 1.00 0.01 N
ATOM 24 C4 G A2231 -78.129 -31.209 31.549 1.00 0.01 C
ATOM 25 P G A2232 -72.583 -27.562 30.280 1.00 0.01 P
ATOM 26 OP1 G A2232 -73.395 -26.340 30.121 1.00 0.01 O
ATOM 27 OP2 G A2232 -71.727 -27.984 29.154 1.00 0.01 O
ATOM 28 O5' G A2232 -71.716 -27.482 31.604 1.00 0.01 O
TER
ATOM 1 O3' U B2068 -80.879 -26.948 26.868 1.00 0.01 O
ATOM 2 P U B2069 -81.030 -26.218 28.287 1.00 0.01 P
ATOM 3 OP1 U B2069 -81.254 -24.796 28.022 1.00 0.01 O
ATOM 4 OP2 U B2069 -79.880 -26.594 29.075 1.00 0.01 O
ATOM 5 O5' U B2069 -82.356 -26.866 28.876 1.00 0.01 O
ATOM 6 C5' U B2069 -82.957 -26.348 30.044 1.00 0.01 C
ATOM 7 C4' U B2069 -84.472 -26.335 29.978 1.00 0.01 C
ATOM 8 O4' U B2069 -84.954 -25.187 29.241 1.00 0.01 O
ATOM 9 C3' U B2069 -85.164 -27.480 29.283 1.00 0.01 C
ATOM 10 O3' U B2069 -85.139 -28.680 30.024 1.00 0.01 O
ATOM 11 C2' U B2069 -86.562 -26.910 29.160 1.00 0.01 C
ATOM 12 O2' U B2069 -87.185 -26.904 30.431 1.00 0.01 O
ATOM 13 C1' U B2069 -86.267 -25.462 28.774 1.00 0.01 C
ATOM 14 N1 U B2069 -86.347 -25.247 27.291 1.00 0.73 N
ATOM 15 C2 U B2069 -85.203 -24.849 26.617 1.00 0.73 C
ATOM 16 O2 U B2069 -84.174 -24.622 27.219 1.00 0.73 O
ATOM 17 N3 U B2069 -85.265 -24.711 25.246 1.00 0.73 N
ATOM 18 C4 U B2069 -86.363 -24.941 24.463 1.00 0.73 C
ATOM 19 O4 U B2069 -86.216 -24.755 23.252 1.00 0.73 O
ATOM 20 C5 U B2069 -87.546 -25.371 25.186 1.00 0.73 C
ATOM 21 C6 U B2069 -87.497 -25.498 26.543 1.00 0.73 C
ATOM 22 P A B2070 -84.234 -29.910 29.564 1.00 0.01 P
ATOM 23 OP1 A B2070 -83.406 -30.285 30.744 1.00 0.01 O
ATOM 24 OP2 A B2070 -83.580 -29.512 28.320 1.00 0.01 O
ATOM 25 O5' A B2070 -85.284 -31.051 29.258 1.00 0.01 O
TER
ATOM 2 P G A2231 -77.415 -25.792 33.728 1.00 0.02 P
ATOM 3 OP1 G A2231 -76.771 -24.831 32.771 1.00 0.02 O
ATOM 4 OP2 G A2231 -78.792 -25.504 34.217 1.00 0.02 O
ATOM 5 O5' G A2231 -77.344 -27.249 33.129 1.00 0.02 O
ATOM 6 C5' G A2231 -76.805 -27.452 31.840 1.00 0.02 C
ATOM 7 C4' G A2231 -75.543 -28.265 31.897 1.00 0.02 C
ATOM 8 O4' G A2231 -75.823 -29.506 32.606 1.00 0.02 O
ATOM 9 C3' G A2231 -74.991 -28.667 30.542 1.00 0.02 C
ATOM 10 O3' G A2231 -73.573 -28.794 30.621 1.00 0.02 O
ATOM 11 C2' G A2231 -75.634 -30.040 30.325 1.00 0.02 C
ATOM 12 O2' G A2231 -74.927 -30.903 29.472 1.00 0.02 O
ATOM 13 C1' G A2231 -75.703 -30.603 31.732 1.00 0.02 C
ATOM 14 N9 G A2231 -76.852 -31.462 31.941 1.00 0.01 N
ATOM 15 C8 G A2231 -76.874 -32.688 32.549 1.00 0.01 C
ATOM 16 N7 G A2231 -78.049 -33.244 32.590 1.00 0.01 N
ATOM 17 C5 G A2231 -78.842 -32.310 31.964 1.00 0.01 C
ATOM 18 C6 G A2231 -80.224 -32.367 31.725 1.00 0.01 C
ATOM 19 O6 G A2231 -81.033 -33.260 32.022 1.00 0.01 O
ATOM 20 N1 G A2231 -80.642 -31.222 31.077 1.00 0.01 N
ATOM 21 C2 G A2231 -79.847 -30.186 30.706 1.00 0.01 C
ATOM 22 N2 G A2231 -80.500 -29.212 30.090 1.00 0.01 N
ATOM 23 N3 G A2231 -78.560 -30.115 30.917 1.00 0.01 N
ATOM 24 C4 G A2231 -78.129 -31.209 31.549 1.00 0.01 C
ATOM 25 P G A2232 -72.583 -27.562 30.280 1.00 0.01 P
ATOM 26 OP1 G A2232 -73.395 -26.340 30.121 1.00 0.01 O
ATOM 27 OP2 G A2232 -71.727 -27.984 29.154 1.00 0.01 O
ATOM 28 O5' G A2232 -71.716 -27.482 31.604 1.00 0.01 O
TER
ATOM 1 O3' U B2068 -80.879 -26.948 26.868 1.00 0.01 O
ATOM 2 P U B2069 -81.030 -26.218 28.287 1.00 0.01 P
ATOM 3 OP1 U B2069 -81.254 -24.796 28.022 1.00 0.01 O
ATOM 4 OP2 U B2069 -79.880 -26.594 29.075 1.00 0.01 O
ATOM 5 O5' U B2069 -82.356 -26.866 28.876 1.00 0.01 O
ATOM 6 C5' U B2069 -82.957 -26.348 30.044 1.00 0.01 C
ATOM 7 C4' U B2069 -84.472 -26.335 29.978 1.00 0.01 C
ATOM 8 O4' U B2069 -84.954 -25.187 29.241 1.00 0.01 O
ATOM 9 C3' U B2069 -85.164 -27.480 29.283 1.00 0.01 C
ATOM 10 O3' U B2069 -85.139 -28.680 30.024 1.00 0.01 O
ATOM 11 C2' U B2069 -86.562 -26.910 29.160 1.00 0.01 C
ATOM 12 O2' U B2069 -87.185 -26.904 30.431 1.00 0.01 O
ATOM 13 C1' U B2069 -86.267 -25.462 28.774 1.00 0.01 C
ATOM 14 N1 U B2069 -86.347 -25.247 27.291 1.00 0.73 N
ATOM 15 C2 U B2069 -85.203 -24.849 26.617 1.00 0.73 C
ATOM 16 O2 U B2069 -84.174 -24.622 27.219 1.00 0.73 O
ATOM 17 N3 U B2069 -85.265 -24.711 25.246 1.00 0.73 N
ATOM 18 C4 U B2069 -86.363 -24.941 24.463 1.00 0.73 C
ATOM 19 O4 U B2069 -86.216 -24.755 23.252 1.00 0.73 O
ATOM 20 C5 U B2069 -87.546 -25.371 25.186 1.00 0.73 C
ATOM 21 C6 U B2069 -87.497 -25.498 26.543 1.00 0.73 C
ATOM 22 P A B2070 -84.234 -29.910 29.564 1.00 0.01 P
ATOM 23 OP1 A B2070 -83.406 -30.285 30.744 1.00 0.01 O
ATOM 24 OP2 A B2070 -83.580 -29.512 28.320 1.00 0.01 O
ATOM 25 O5' A B2070 -85.284 -31.051 29.258 1.00 0.01 O
TER
Atoms:
OP1: (-76.771,-24.831,32.771)
OP2: (-78.792,-25.504,34.217)
C3': (-74.991,-28.667,30.542)
C1': (-75.703,-30.603,31.732)
C5': (-76.805,-27.452,31.840)
O6: (-81.033,-33.260,32.022)
O4': (-75.823,-29.506,32.606)
C8: (-76.874,-32.688,32.549)
C2: (-79.847,-30.186,30.706)
C6: (-80.224,-32.367,31.725)
C5: (-78.842,-32.310,31.964)
C4: (-78.129,-31.209,31.549)
P: (-77.415,-25.792,33.728)
C4': (-75.543,-28.265,31.897)
C2': (-75.634,-30.040,30.325)
O2': (-74.927,-30.903,29.472)
N1: (-80.642,-31.222,31.077)
N2: (-80.500,-29.212,30.090)
N3: (-78.560,-30.115,30.917)
N7: (-78.049,-33.244,32.590)
N9: (-76.852,-31.462,31.941)
O5': (-77.344,-27.249,33.129)
O3': (-73.573,-28.794,30.621)
OP2: (-78.792,-25.504,34.217)
C3': (-74.991,-28.667,30.542)
C1': (-75.703,-30.603,31.732)
C5': (-76.805,-27.452,31.840)
O6: (-81.033,-33.260,32.022)
O4': (-75.823,-29.506,32.606)
C8: (-76.874,-32.688,32.549)
C2: (-79.847,-30.186,30.706)
C6: (-80.224,-32.367,31.725)
C5: (-78.842,-32.310,31.964)
C4: (-78.129,-31.209,31.549)
P: (-77.415,-25.792,33.728)
C4': (-75.543,-28.265,31.897)
C2': (-75.634,-30.040,30.325)
O2': (-74.927,-30.903,29.472)
N1: (-80.642,-31.222,31.077)
N2: (-80.500,-29.212,30.090)
N3: (-78.560,-30.115,30.917)
N7: (-78.049,-33.244,32.590)
N9: (-76.852,-31.462,31.941)
O5': (-77.344,-27.249,33.129)
O3': (-73.573,-28.794,30.621)
C4: (-86.363,-24.941,24.463)
N3: (-85.265,-24.711,25.246)
OP1: (-81.254,-24.796,28.022)
OP2: (-79.880,-26.594,29.075)
C2: (-85.203,-24.849,26.617)
C1': (-86.267,-25.462,28.774)
C3': (-85.164,-27.480,29.283)
O5': (-82.356,-26.866,28.876)
O4': (-84.954,-25.187,29.241)
C5': (-82.957,-26.348,30.044)
P: (-81.030,-26.218,28.287)
C4': (-84.472,-26.335,29.978)
C2': (-86.562,-26.910,29.160)
O2': (-87.185,-26.904,30.431)
N1: (-86.347,-25.247,27.291)
O4: (-86.216,-24.755,23.252)
O2: (-84.174,-24.622,27.219)
C6: (-87.497,-25.498,26.543)
C5: (-87.546,-25.371,25.186)
O3': (-85.139,-28.680,30.024)
N3: (-85.265,-24.711,25.246)
OP1: (-81.254,-24.796,28.022)
OP2: (-79.880,-26.594,29.075)
C2: (-85.203,-24.849,26.617)
C1': (-86.267,-25.462,28.774)
C3': (-85.164,-27.480,29.283)
O5': (-82.356,-26.866,28.876)
O4': (-84.954,-25.187,29.241)
C5': (-82.957,-26.348,30.044)
P: (-81.030,-26.218,28.287)
C4': (-84.472,-26.335,29.978)
C2': (-86.562,-26.910,29.160)
O2': (-87.185,-26.904,30.431)
N1: (-86.347,-25.247,27.291)
O4: (-86.216,-24.755,23.252)
O2: (-84.174,-24.622,27.219)
C6: (-87.497,-25.498,26.543)
C5: (-87.546,-25.371,25.186)
O3': (-85.139,-28.680,30.024)
Image (generated by PyMOL):