Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2402:A1858
Extra
PDB:
ATOM 1 O3' U A2401 -102.827 -50.410 84.584 1.00 0.01 O
ATOM 2 P G A2402 -103.716 -50.126 83.290 1.00 0.01 P
ATOM 3 OP1 G A2402 -104.801 -51.131 83.312 1.00 0.01 O
ATOM 4 OP2 G A2402 -102.824 -50.069 82.134 1.00 0.01 O
ATOM 5 O5' G A2402 -104.287 -48.683 83.560 1.00 0.01 O
ATOM 6 C5' G A2402 -105.028 -48.436 84.728 1.00 0.01 C
ATOM 7 C4' G A2402 -105.232 -46.982 84.941 1.00 0.01 C
ATOM 8 O4' G A2402 -103.996 -46.397 85.383 1.00 0.01 O
ATOM 9 C3' G A2402 -105.627 -46.195 83.710 1.00 0.01 C
ATOM 10 O3' G A2402 -107.015 -46.229 83.488 1.00 0.01 O
ATOM 11 C2' G A2402 -105.114 -44.808 84.026 1.00 0.01 C
ATOM 12 O2' G A2402 -106.031 -44.111 84.866 1.00 0.01 O
ATOM 13 C1' G A2402 -103.842 -45.121 84.824 1.00 0.01 C
ATOM 14 N9 G A2402 -102.651 -45.149 83.971 1.00 0.01 N
ATOM 15 C8 G A2402 -102.002 -46.290 83.599 1.00 0.01 C
ATOM 16 N7 G A2402 -100.993 -46.034 82.835 1.00 0.01 N
ATOM 17 C5 G A2402 -100.990 -44.652 82.706 1.00 0.01 C
ATOM 18 C6 G A2402 -100.111 -43.816 81.991 1.00 0.01 C
ATOM 19 O6 G A2402 -99.144 -44.108 81.298 1.00 0.01 O
ATOM 20 N1 G A2402 -100.445 -42.502 82.153 1.00 0.01 N
ATOM 21 C2 G A2402 -101.495 -42.062 82.896 1.00 0.01 C
ATOM 22 N2 G A2402 -101.614 -40.740 82.887 1.00 0.01 N
ATOM 23 N3 G A2402 -102.345 -42.809 83.570 1.00 0.01 N
ATOM 24 C4 G A2402 -102.013 -44.089 83.417 1.00 0.01 C
ATOM 25 P G A2403 -107.613 -46.715 82.082 1.00 7.50 P
ATOM 26 OP1 G A2403 -108.891 -47.395 82.371 1.00 7.50 O
ATOM 27 OP2 G A2403 -106.546 -47.482 81.390 1.00 7.50 O
ATOM 28 O5' G A2403 -107.893 -45.339 81.324 1.00 7.50 O
TER
ATOM 1 O3' U B1857 -103.116 -37.939 83.409 1.00 7.60 O
ATOM 2 P U B1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U B1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U B1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U B1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U B1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U B1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U B1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U B1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U B1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U B1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U B1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U B1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U B1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U B1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U B1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U B1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U B1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U B1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U B1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
ATOM 2 P G A2402 -103.716 -50.126 83.290 1.00 0.01 P
ATOM 3 OP1 G A2402 -104.801 -51.131 83.312 1.00 0.01 O
ATOM 4 OP2 G A2402 -102.824 -50.069 82.134 1.00 0.01 O
ATOM 5 O5' G A2402 -104.287 -48.683 83.560 1.00 0.01 O
ATOM 6 C5' G A2402 -105.028 -48.436 84.728 1.00 0.01 C
ATOM 7 C4' G A2402 -105.232 -46.982 84.941 1.00 0.01 C
ATOM 8 O4' G A2402 -103.996 -46.397 85.383 1.00 0.01 O
ATOM 9 C3' G A2402 -105.627 -46.195 83.710 1.00 0.01 C
ATOM 10 O3' G A2402 -107.015 -46.229 83.488 1.00 0.01 O
ATOM 11 C2' G A2402 -105.114 -44.808 84.026 1.00 0.01 C
ATOM 12 O2' G A2402 -106.031 -44.111 84.866 1.00 0.01 O
ATOM 13 C1' G A2402 -103.842 -45.121 84.824 1.00 0.01 C
ATOM 14 N9 G A2402 -102.651 -45.149 83.971 1.00 0.01 N
ATOM 15 C8 G A2402 -102.002 -46.290 83.599 1.00 0.01 C
ATOM 16 N7 G A2402 -100.993 -46.034 82.835 1.00 0.01 N
ATOM 17 C5 G A2402 -100.990 -44.652 82.706 1.00 0.01 C
ATOM 18 C6 G A2402 -100.111 -43.816 81.991 1.00 0.01 C
ATOM 19 O6 G A2402 -99.144 -44.108 81.298 1.00 0.01 O
ATOM 20 N1 G A2402 -100.445 -42.502 82.153 1.00 0.01 N
ATOM 21 C2 G A2402 -101.495 -42.062 82.896 1.00 0.01 C
ATOM 22 N2 G A2402 -101.614 -40.740 82.887 1.00 0.01 N
ATOM 23 N3 G A2402 -102.345 -42.809 83.570 1.00 0.01 N
ATOM 24 C4 G A2402 -102.013 -44.089 83.417 1.00 0.01 C
ATOM 25 P G A2403 -107.613 -46.715 82.082 1.00 7.50 P
ATOM 26 OP1 G A2403 -108.891 -47.395 82.371 1.00 7.50 O
ATOM 27 OP2 G A2403 -106.546 -47.482 81.390 1.00 7.50 O
ATOM 28 O5' G A2403 -107.893 -45.339 81.324 1.00 7.50 O
TER
ATOM 1 O3' U B1857 -103.116 -37.939 83.409 1.00 7.60 O
ATOM 2 P U B1858 -104.329 -38.318 84.356 1.00 9.34 P
ATOM 3 OP1 U B1858 -104.068 -39.666 84.903 1.00 9.34 O
ATOM 4 OP2 U B1858 -105.550 -38.098 83.570 1.00 9.34 O
ATOM 5 O5' U B1858 -104.231 -37.230 85.503 1.00 9.34 O
ATOM 6 C5' U B1858 -102.986 -36.928 86.115 1.00 9.34 C
ATOM 7 C4' U B1858 -103.098 -35.782 87.104 1.00 9.34 C
ATOM 8 O4' U B1858 -103.354 -34.539 86.386 1.00 9.34 O
ATOM 9 C3' U B1858 -104.214 -35.917 88.135 1.00 9.34 C
ATOM 10 O3' U B1858 -103.809 -35.298 89.358 1.00 9.34 O
ATOM 11 C2' U B1858 -105.353 -35.122 87.498 1.00 9.34 C
ATOM 12 O2' U B1858 -106.313 -34.637 88.414 1.00 9.34 O
ATOM 13 C1' U B1858 -104.590 -33.989 86.799 1.00 9.34 C
ATOM 14 N1 U B1858 -105.247 -33.473 85.603 1.00 9.38 N
ATOM 15 C2 U B1858 -104.929 -32.166 85.316 1.00 9.38 C
ATOM 16 O2 U B1858 -104.206 -31.526 86.025 1.00 9.38 O
ATOM 17 N3 U B1858 -105.480 -31.608 84.196 1.00 9.38 N
ATOM 18 C4 U B1858 -106.325 -32.262 83.315 1.00 9.38 C
ATOM 19 O4 U B1858 -106.751 -31.610 82.339 1.00 9.38 O
ATOM 20 C5 U B1858 -106.614 -33.661 83.664 1.00 9.38 C
ATOM 21 C6 U B1858 -106.063 -34.217 84.774 1.00 9.38 C
ATOM 22 P A B1859 -102.762 -36.036 90.329 1.00 39.63 P
ATOM 23 OP1 A B1859 -101.400 -35.832 89.764 1.00 39.63 O
ATOM 24 OP2 A B1859 -103.255 -37.419 90.528 1.00 39.63 O
ATOM 25 O5' A B1859 -102.914 -35.210 91.669 1.00 39.63 O
TER
Atoms:
OP1: (-104.801,-51.131,83.312)
OP2: (-102.824,-50.069,82.134)
C3': (-105.627,-46.195,83.710)
C1': (-103.842,-45.121,84.824)
C5': (-105.028,-48.436,84.728)
O6: (-99.144,-44.108,81.298)
O4': (-103.996,-46.397,85.383)
C8: (-102.002,-46.290,83.599)
C2: (-101.495,-42.062,82.896)
C6: (-100.111,-43.816,81.991)
C5: (-100.990,-44.652,82.706)
C4: (-102.013,-44.089,83.417)
P: (-103.716,-50.126,83.290)
C4': (-105.232,-46.982,84.941)
C2': (-105.114,-44.808,84.026)
O2': (-106.031,-44.111,84.866)
N1: (-100.445,-42.502,82.153)
N2: (-101.614,-40.740,82.887)
N3: (-102.345,-42.809,83.570)
N7: (-100.993,-46.034,82.835)
N9: (-102.651,-45.149,83.971)
O5': (-104.287,-48.683,83.560)
O3': (-107.015,-46.229,83.488)
OP2: (-102.824,-50.069,82.134)
C3': (-105.627,-46.195,83.710)
C1': (-103.842,-45.121,84.824)
C5': (-105.028,-48.436,84.728)
O6: (-99.144,-44.108,81.298)
O4': (-103.996,-46.397,85.383)
C8: (-102.002,-46.290,83.599)
C2: (-101.495,-42.062,82.896)
C6: (-100.111,-43.816,81.991)
C5: (-100.990,-44.652,82.706)
C4: (-102.013,-44.089,83.417)
P: (-103.716,-50.126,83.290)
C4': (-105.232,-46.982,84.941)
C2': (-105.114,-44.808,84.026)
O2': (-106.031,-44.111,84.866)
N1: (-100.445,-42.502,82.153)
N2: (-101.614,-40.740,82.887)
N3: (-102.345,-42.809,83.570)
N7: (-100.993,-46.034,82.835)
N9: (-102.651,-45.149,83.971)
O5': (-104.287,-48.683,83.560)
O3': (-107.015,-46.229,83.488)
C4: (-106.325,-32.262,83.315)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
N3: (-105.480,-31.608,84.196)
OP1: (-104.068,-39.666,84.903)
OP2: (-105.550,-38.098,83.570)
C2: (-104.929,-32.166,85.316)
C1': (-104.590,-33.989,86.799)
C3': (-104.214,-35.917,88.135)
O5': (-104.231,-37.230,85.503)
O4': (-103.354,-34.539,86.386)
C5': (-102.986,-36.928,86.115)
P: (-104.329,-38.318,84.356)
C4': (-103.098,-35.782,87.104)
C2': (-105.353,-35.122,87.498)
O2': (-106.313,-34.637,88.414)
N1: (-105.247,-33.473,85.603)
O4: (-106.751,-31.610,82.339)
O2: (-104.206,-31.526,86.025)
C6: (-106.063,-34.217,84.774)
C5: (-106.614,-33.661,83.664)
O3': (-103.809,-35.298,89.358)
Image (generated by PyMOL):