Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2563:A1123
Extra
PDB:
ATOM 1 O3' G A2562 -86.146 -59.608 -19.805 1.00 0.01 O
ATOM 2 P G A2563 -85.085 -59.600 -18.631 1.00 0.01 P
ATOM 3 OP1 G A2563 -85.770 -59.108 -17.406 1.00 0.01 O
ATOM 4 OP2 G A2563 -83.919 -58.872 -19.131 1.00 0.01 O
ATOM 5 O5' G A2563 -84.733 -61.135 -18.474 1.00 0.01 O
ATOM 6 C5' G A2563 -85.741 -62.075 -18.167 1.00 0.01 C
ATOM 7 C4' G A2563 -85.259 -63.474 -18.345 1.00 0.01 C
ATOM 8 O4' G A2563 -84.846 -63.670 -19.698 1.00 0.01 O
ATOM 9 C3' G A2563 -84.031 -63.838 -17.577 1.00 0.01 C
ATOM 10 O3' G A2563 -84.278 -64.086 -16.235 1.00 0.01 O
ATOM 11 C2' G A2563 -83.526 -65.042 -18.322 1.00 0.01 C
ATOM 12 O2' G A2563 -84.276 -66.184 -17.983 1.00 0.01 O
ATOM 13 C1' G A2563 -83.847 -64.650 -19.744 1.00 0.01 C
ATOM 14 N9 G A2563 -82.693 -64.092 -20.420 1.00 0.01 N
ATOM 15 C8 G A2563 -82.479 -62.822 -20.843 1.00 0.01 C
ATOM 16 N7 G A2563 -81.336 -62.683 -21.443 1.00 0.01 N
ATOM 17 C5 G A2563 -80.792 -63.952 -21.391 1.00 0.01 C
ATOM 18 C6 G A2563 -79.569 -64.441 -21.860 1.00 0.01 C
ATOM 19 O6 G A2563 -78.675 -63.823 -22.448 1.00 0.01 O
ATOM 20 N1 G A2563 -79.456 -65.789 -21.597 1.00 0.01 N
ATOM 21 C2 G A2563 -80.381 -66.561 -20.970 1.00 0.01 C
ATOM 22 N2 G A2563 -80.083 -67.850 -20.806 1.00 0.01 N
ATOM 23 N3 G A2563 -81.512 -66.119 -20.522 1.00 0.01 N
ATOM 24 C4 G A2563 -81.630 -64.826 -20.771 1.00 0.01 C
ATOM 25 P U A2564 -83.235 -63.561 -15.178 1.00 0.01 P
ATOM 26 OP1 U A2564 -83.813 -63.826 -13.844 1.00 0.01 O
ATOM 27 OP2 U A2564 -82.913 -62.190 -15.549 1.00 0.01 O
ATOM 28 O5' U A2564 -81.967 -64.489 -15.442 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 2 P U B1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 3 OP1 U B1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 4 OP2 U B1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 5 O5' U B1123 -80.769 -71.796 -20.192 1.00 0.01 O
ATOM 6 C5' U B1123 -80.639 -72.326 -21.500 1.00 0.01 C
ATOM 7 C4' U B1123 -79.673 -73.469 -21.540 1.00 0.01 C
ATOM 8 O4' U B1123 -78.946 -73.522 -20.286 1.00 0.01 O
ATOM 9 C3' U B1123 -80.308 -74.840 -21.716 1.00 0.01 C
ATOM 10 O3' U B1123 -79.452 -75.641 -22.503 1.00 0.01 O
ATOM 11 C2' U B1123 -80.322 -75.366 -20.293 1.00 0.01 C
ATOM 12 O2' U B1123 -80.403 -76.758 -20.163 1.00 0.01 O
ATOM 13 C1' U B1123 -79.004 -74.834 -19.788 1.00 0.01 C
ATOM 14 N1 U B1123 -78.900 -74.808 -18.319 1.00 0.01 N
ATOM 15 C2 U B1123 -77.898 -75.469 -17.627 1.00 0.01 C
ATOM 16 O2 U B1123 -76.979 -76.088 -18.102 1.00 0.01 O
ATOM 17 N3 U B1123 -77.977 -75.368 -16.288 1.00 0.01 N
ATOM 18 C4 U B1123 -78.934 -74.725 -15.577 1.00 0.01 C
ATOM 19 O4 U B1123 -78.899 -74.728 -14.366 1.00 0.01 O
ATOM 20 C5 U B1123 -79.929 -74.088 -16.325 1.00 0.01 C
ATOM 21 C6 U B1123 -79.881 -74.156 -17.641 1.00 0.01 C
ATOM 22 P G B1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 23 OP1 G B1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 24 OP2 G B1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 25 O5' G B1124 -80.621 -77.265 -23.975 1.00 0.01 O
TER
ATOM 2 P G A2563 -85.085 -59.600 -18.631 1.00 0.01 P
ATOM 3 OP1 G A2563 -85.770 -59.108 -17.406 1.00 0.01 O
ATOM 4 OP2 G A2563 -83.919 -58.872 -19.131 1.00 0.01 O
ATOM 5 O5' G A2563 -84.733 -61.135 -18.474 1.00 0.01 O
ATOM 6 C5' G A2563 -85.741 -62.075 -18.167 1.00 0.01 C
ATOM 7 C4' G A2563 -85.259 -63.474 -18.345 1.00 0.01 C
ATOM 8 O4' G A2563 -84.846 -63.670 -19.698 1.00 0.01 O
ATOM 9 C3' G A2563 -84.031 -63.838 -17.577 1.00 0.01 C
ATOM 10 O3' G A2563 -84.278 -64.086 -16.235 1.00 0.01 O
ATOM 11 C2' G A2563 -83.526 -65.042 -18.322 1.00 0.01 C
ATOM 12 O2' G A2563 -84.276 -66.184 -17.983 1.00 0.01 O
ATOM 13 C1' G A2563 -83.847 -64.650 -19.744 1.00 0.01 C
ATOM 14 N9 G A2563 -82.693 -64.092 -20.420 1.00 0.01 N
ATOM 15 C8 G A2563 -82.479 -62.822 -20.843 1.00 0.01 C
ATOM 16 N7 G A2563 -81.336 -62.683 -21.443 1.00 0.01 N
ATOM 17 C5 G A2563 -80.792 -63.952 -21.391 1.00 0.01 C
ATOM 18 C6 G A2563 -79.569 -64.441 -21.860 1.00 0.01 C
ATOM 19 O6 G A2563 -78.675 -63.823 -22.448 1.00 0.01 O
ATOM 20 N1 G A2563 -79.456 -65.789 -21.597 1.00 0.01 N
ATOM 21 C2 G A2563 -80.381 -66.561 -20.970 1.00 0.01 C
ATOM 22 N2 G A2563 -80.083 -67.850 -20.806 1.00 0.01 N
ATOM 23 N3 G A2563 -81.512 -66.119 -20.522 1.00 0.01 N
ATOM 24 C4 G A2563 -81.630 -64.826 -20.771 1.00 0.01 C
ATOM 25 P U A2564 -83.235 -63.561 -15.178 1.00 0.01 P
ATOM 26 OP1 U A2564 -83.813 -63.826 -13.844 1.00 0.01 O
ATOM 27 OP2 U A2564 -82.913 -62.190 -15.549 1.00 0.01 O
ATOM 28 O5' U A2564 -81.967 -64.489 -15.442 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -83.062 -71.100 -20.940 1.00 0.01 O
ATOM 2 P U B1123 -82.176 -71.348 -19.632 1.00 0.01 P
ATOM 3 OP1 U B1123 -82.793 -72.500 -18.918 1.00 0.01 O
ATOM 4 OP2 U B1123 -82.047 -70.038 -18.953 1.00 0.01 O
ATOM 5 O5' U B1123 -80.769 -71.796 -20.192 1.00 0.01 O
ATOM 6 C5' U B1123 -80.639 -72.326 -21.500 1.00 0.01 C
ATOM 7 C4' U B1123 -79.673 -73.469 -21.540 1.00 0.01 C
ATOM 8 O4' U B1123 -78.946 -73.522 -20.286 1.00 0.01 O
ATOM 9 C3' U B1123 -80.308 -74.840 -21.716 1.00 0.01 C
ATOM 10 O3' U B1123 -79.452 -75.641 -22.503 1.00 0.01 O
ATOM 11 C2' U B1123 -80.322 -75.366 -20.293 1.00 0.01 C
ATOM 12 O2' U B1123 -80.403 -76.758 -20.163 1.00 0.01 O
ATOM 13 C1' U B1123 -79.004 -74.834 -19.788 1.00 0.01 C
ATOM 14 N1 U B1123 -78.900 -74.808 -18.319 1.00 0.01 N
ATOM 15 C2 U B1123 -77.898 -75.469 -17.627 1.00 0.01 C
ATOM 16 O2 U B1123 -76.979 -76.088 -18.102 1.00 0.01 O
ATOM 17 N3 U B1123 -77.977 -75.368 -16.288 1.00 0.01 N
ATOM 18 C4 U B1123 -78.934 -74.725 -15.577 1.00 0.01 C
ATOM 19 O4 U B1123 -78.899 -74.728 -14.366 1.00 0.01 O
ATOM 20 C5 U B1123 -79.929 -74.088 -16.325 1.00 0.01 C
ATOM 21 C6 U B1123 -79.881 -74.156 -17.641 1.00 0.01 C
ATOM 22 P G B1124 -79.777 -75.933 -24.039 1.00 0.01 P
ATOM 23 OP1 G B1124 -78.522 -76.190 -24.685 1.00 0.01 O
ATOM 24 OP2 G B1124 -80.604 -74.840 -24.524 1.00 0.01 O
ATOM 25 O5' G B1124 -80.621 -77.265 -23.975 1.00 0.01 O
TER
Atoms:
OP1: (-85.770,-59.108,-17.406)
OP2: (-83.919,-58.872,-19.131)
C3': (-84.031,-63.838,-17.577)
C1': (-83.847,-64.650,-19.744)
C5': (-85.741,-62.075,-18.167)
O6: (-78.675,-63.823,-22.448)
O4': (-84.846,-63.670,-19.698)
C8: (-82.479,-62.822,-20.843)
C2: (-80.381,-66.561,-20.970)
C6: (-79.569,-64.441,-21.860)
C5: (-80.792,-63.952,-21.391)
C4: (-81.630,-64.826,-20.771)
P: (-85.085,-59.600,-18.631)
C4': (-85.259,-63.474,-18.345)
C2': (-83.526,-65.042,-18.322)
O2': (-84.276,-66.184,-17.983)
N1: (-79.456,-65.789,-21.597)
N2: (-80.083,-67.850,-20.806)
N3: (-81.512,-66.119,-20.522)
N7: (-81.336,-62.683,-21.443)
N9: (-82.693,-64.092,-20.420)
O5': (-84.733,-61.135,-18.474)
O3': (-84.278,-64.086,-16.235)
OP2: (-83.919,-58.872,-19.131)
C3': (-84.031,-63.838,-17.577)
C1': (-83.847,-64.650,-19.744)
C5': (-85.741,-62.075,-18.167)
O6: (-78.675,-63.823,-22.448)
O4': (-84.846,-63.670,-19.698)
C8: (-82.479,-62.822,-20.843)
C2: (-80.381,-66.561,-20.970)
C6: (-79.569,-64.441,-21.860)
C5: (-80.792,-63.952,-21.391)
C4: (-81.630,-64.826,-20.771)
P: (-85.085,-59.600,-18.631)
C4': (-85.259,-63.474,-18.345)
C2': (-83.526,-65.042,-18.322)
O2': (-84.276,-66.184,-17.983)
N1: (-79.456,-65.789,-21.597)
N2: (-80.083,-67.850,-20.806)
N3: (-81.512,-66.119,-20.522)
N7: (-81.336,-62.683,-21.443)
N9: (-82.693,-64.092,-20.420)
O5': (-84.733,-61.135,-18.474)
O3': (-84.278,-64.086,-16.235)
C4: (-78.934,-74.725,-15.577)
N3: (-77.977,-75.368,-16.288)
OP1: (-82.793,-72.500,-18.918)
OP2: (-82.047,-70.038,-18.953)
C2: (-77.898,-75.469,-17.627)
C1': (-79.004,-74.834,-19.788)
C3': (-80.308,-74.840,-21.716)
O5': (-80.769,-71.796,-20.192)
O4': (-78.946,-73.522,-20.286)
C5': (-80.639,-72.326,-21.500)
P: (-82.176,-71.348,-19.632)
C4': (-79.673,-73.469,-21.540)
C2': (-80.322,-75.366,-20.293)
O2': (-80.403,-76.758,-20.163)
N1: (-78.900,-74.808,-18.319)
O4: (-78.899,-74.728,-14.366)
O2: (-76.979,-76.088,-18.102)
C6: (-79.881,-74.156,-17.641)
C5: (-79.929,-74.088,-16.325)
O3': (-79.452,-75.641,-22.503)
N3: (-77.977,-75.368,-16.288)
OP1: (-82.793,-72.500,-18.918)
OP2: (-82.047,-70.038,-18.953)
C2: (-77.898,-75.469,-17.627)
C1': (-79.004,-74.834,-19.788)
C3': (-80.308,-74.840,-21.716)
O5': (-80.769,-71.796,-20.192)
O4': (-78.946,-73.522,-20.286)
C5': (-80.639,-72.326,-21.500)
P: (-82.176,-71.348,-19.632)
C4': (-79.673,-73.469,-21.540)
C2': (-80.322,-75.366,-20.293)
O2': (-80.403,-76.758,-20.163)
N1: (-78.900,-74.808,-18.319)
O4: (-78.899,-74.728,-14.366)
O2: (-76.979,-76.088,-18.102)
C6: (-79.881,-74.156,-17.641)
C5: (-79.929,-74.088,-16.325)
O3': (-79.452,-75.641,-22.503)
Image (generated by PyMOL):