Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A407:A223
Extra
PDB:
ATOM 1 O3' G A 406 -82.356 -35.030 85.336 1.00 5.04 O
ATOM 2 P G A 407 -83.534 -35.681 84.488 1.00 1.89 P
ATOM 3 OP1 G A 407 -83.654 -34.883 83.242 1.00 1.89 O
ATOM 4 OP2 G A 407 -84.708 -35.800 85.375 1.00 1.89 O
ATOM 5 O5' G A 407 -82.955 -37.130 84.154 1.00 1.89 O
ATOM 6 C5' G A 407 -82.199 -37.336 82.972 1.00 1.89 C
ATOM 7 C4' G A 407 -81.624 -38.721 82.892 1.00 1.89 C
ATOM 8 O4' G A 407 -81.270 -39.197 84.213 1.00 1.89 O
ATOM 9 C3' G A 407 -82.551 -39.803 82.396 1.00 1.89 C
ATOM 10 O3' G A 407 -82.811 -39.763 81.008 1.00 1.89 O
ATOM 11 C2' G A 407 -81.831 -41.041 82.860 1.00 1.89 C
ATOM 12 O2' G A 407 -80.651 -41.250 82.108 1.00 1.89 O
ATOM 13 C1' G A 407 -81.436 -40.599 84.254 1.00 1.89 C
ATOM 14 N9 G A 407 -82.491 -40.923 85.228 1.00 1.79 N
ATOM 15 C8 G A 407 -83.277 -40.060 85.927 1.00 1.79 C
ATOM 16 N7 G A 407 -84.126 -40.668 86.718 1.00 1.79 N
ATOM 17 C5 G A 407 -83.901 -42.013 86.520 1.00 1.79 C
ATOM 18 C6 G A 407 -84.501 -43.141 87.109 1.00 1.79 C
ATOM 19 O6 G A 407 -85.402 -43.190 87.949 1.00 1.79 O
ATOM 20 N1 G A 407 -83.950 -44.316 86.632 1.00 1.79 N
ATOM 21 C2 G A 407 -82.969 -44.419 85.699 1.00 1.79 C
ATOM 22 N2 G A 407 -82.583 -45.646 85.380 1.00 1.79 N
ATOM 23 N3 G A 407 -82.403 -43.386 85.143 1.00 1.79 N
ATOM 24 C4 G A 407 -82.904 -42.201 85.596 1.00 1.79 C
ATOM 25 P G A 408 -84.341 -39.656 80.527 1.00 0.01 P
ATOM 26 OP1 G A 408 -84.357 -38.828 79.283 1.00 0.01 O
ATOM 27 OP2 G A 408 -85.116 -39.194 81.713 1.00 0.01 O
ATOM 28 O5' G A 408 -84.734 -41.164 80.196 1.00 0.01 O
TER
ATOM 1 O3' A B 222 -78.918 -46.422 83.704 1.00 0.01 O
ATOM 2 P U B 223 -79.770 -46.902 82.440 1.00 0.23 P
ATOM 3 OP1 U B 223 -79.285 -46.130 81.272 1.00 0.23 O
ATOM 4 OP2 U B 223 -81.200 -46.811 82.811 1.00 0.23 O
ATOM 5 O5' U B 223 -79.345 -48.413 82.308 1.00 0.23 O
ATOM 6 C5' U B 223 -78.398 -48.817 81.356 1.00 0.23 C
ATOM 7 C4' U B 223 -78.601 -50.256 81.033 1.00 0.23 C
ATOM 8 O4' U B 223 -78.183 -51.066 82.169 1.00 0.23 O
ATOM 9 C3' U B 223 -80.042 -50.641 80.826 1.00 0.23 C
ATOM 10 O3' U B 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 11 C2' U B 223 -80.082 -52.109 81.210 1.00 0.23 C
ATOM 12 O2' U B 223 -79.602 -52.929 80.154 1.00 0.23 O
ATOM 13 C1' U B 223 -79.084 -52.136 82.365 1.00 0.23 C
ATOM 14 N1 U B 223 -79.756 -51.953 83.672 1.00 0.26 N
ATOM 15 C2 U B 223 -80.247 -53.074 84.311 1.00 0.26 C
ATOM 16 O2 U B 223 -80.159 -54.200 83.869 1.00 0.26 O
ATOM 17 N3 U B 223 -80.881 -52.858 85.498 1.00 0.26 N
ATOM 18 C4 U B 223 -81.082 -51.656 86.119 1.00 0.26 C
ATOM 19 O4 U B 223 -81.683 -51.649 87.191 1.00 0.26 O
ATOM 20 C5 U B 223 -80.558 -50.531 85.407 1.00 0.26 C
ATOM 21 C6 U B 223 -79.935 -50.715 84.229 1.00 0.26 C
ATOM 22 P C B 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 23 OP1 C B 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 24 OP2 C B 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 25 O5' C B 224 -82.510 -51.779 79.152 1.00 0.01 O
TER
ATOM 2 P G A 407 -83.534 -35.681 84.488 1.00 1.89 P
ATOM 3 OP1 G A 407 -83.654 -34.883 83.242 1.00 1.89 O
ATOM 4 OP2 G A 407 -84.708 -35.800 85.375 1.00 1.89 O
ATOM 5 O5' G A 407 -82.955 -37.130 84.154 1.00 1.89 O
ATOM 6 C5' G A 407 -82.199 -37.336 82.972 1.00 1.89 C
ATOM 7 C4' G A 407 -81.624 -38.721 82.892 1.00 1.89 C
ATOM 8 O4' G A 407 -81.270 -39.197 84.213 1.00 1.89 O
ATOM 9 C3' G A 407 -82.551 -39.803 82.396 1.00 1.89 C
ATOM 10 O3' G A 407 -82.811 -39.763 81.008 1.00 1.89 O
ATOM 11 C2' G A 407 -81.831 -41.041 82.860 1.00 1.89 C
ATOM 12 O2' G A 407 -80.651 -41.250 82.108 1.00 1.89 O
ATOM 13 C1' G A 407 -81.436 -40.599 84.254 1.00 1.89 C
ATOM 14 N9 G A 407 -82.491 -40.923 85.228 1.00 1.79 N
ATOM 15 C8 G A 407 -83.277 -40.060 85.927 1.00 1.79 C
ATOM 16 N7 G A 407 -84.126 -40.668 86.718 1.00 1.79 N
ATOM 17 C5 G A 407 -83.901 -42.013 86.520 1.00 1.79 C
ATOM 18 C6 G A 407 -84.501 -43.141 87.109 1.00 1.79 C
ATOM 19 O6 G A 407 -85.402 -43.190 87.949 1.00 1.79 O
ATOM 20 N1 G A 407 -83.950 -44.316 86.632 1.00 1.79 N
ATOM 21 C2 G A 407 -82.969 -44.419 85.699 1.00 1.79 C
ATOM 22 N2 G A 407 -82.583 -45.646 85.380 1.00 1.79 N
ATOM 23 N3 G A 407 -82.403 -43.386 85.143 1.00 1.79 N
ATOM 24 C4 G A 407 -82.904 -42.201 85.596 1.00 1.79 C
ATOM 25 P G A 408 -84.341 -39.656 80.527 1.00 0.01 P
ATOM 26 OP1 G A 408 -84.357 -38.828 79.283 1.00 0.01 O
ATOM 27 OP2 G A 408 -85.116 -39.194 81.713 1.00 0.01 O
ATOM 28 O5' G A 408 -84.734 -41.164 80.196 1.00 0.01 O
TER
ATOM 1 O3' A B 222 -78.918 -46.422 83.704 1.00 0.01 O
ATOM 2 P U B 223 -79.770 -46.902 82.440 1.00 0.23 P
ATOM 3 OP1 U B 223 -79.285 -46.130 81.272 1.00 0.23 O
ATOM 4 OP2 U B 223 -81.200 -46.811 82.811 1.00 0.23 O
ATOM 5 O5' U B 223 -79.345 -48.413 82.308 1.00 0.23 O
ATOM 6 C5' U B 223 -78.398 -48.817 81.356 1.00 0.23 C
ATOM 7 C4' U B 223 -78.601 -50.256 81.033 1.00 0.23 C
ATOM 8 O4' U B 223 -78.183 -51.066 82.169 1.00 0.23 O
ATOM 9 C3' U B 223 -80.042 -50.641 80.826 1.00 0.23 C
ATOM 10 O3' U B 223 -80.513 -50.375 79.533 1.00 0.23 O
ATOM 11 C2' U B 223 -80.082 -52.109 81.210 1.00 0.23 C
ATOM 12 O2' U B 223 -79.602 -52.929 80.154 1.00 0.23 O
ATOM 13 C1' U B 223 -79.084 -52.136 82.365 1.00 0.23 C
ATOM 14 N1 U B 223 -79.756 -51.953 83.672 1.00 0.26 N
ATOM 15 C2 U B 223 -80.247 -53.074 84.311 1.00 0.26 C
ATOM 16 O2 U B 223 -80.159 -54.200 83.869 1.00 0.26 O
ATOM 17 N3 U B 223 -80.881 -52.858 85.498 1.00 0.26 N
ATOM 18 C4 U B 223 -81.082 -51.656 86.119 1.00 0.26 C
ATOM 19 O4 U B 223 -81.683 -51.649 87.191 1.00 0.26 O
ATOM 20 C5 U B 223 -80.558 -50.531 85.407 1.00 0.26 C
ATOM 21 C6 U B 223 -79.935 -50.715 84.229 1.00 0.26 C
ATOM 22 P C B 224 -82.090 -50.270 79.321 1.00 0.01 P
ATOM 23 OP1 C B 224 -82.330 -49.523 78.052 1.00 0.01 O
ATOM 24 OP2 C B 224 -82.656 -49.737 80.598 1.00 0.01 O
ATOM 25 O5' C B 224 -82.510 -51.779 79.152 1.00 0.01 O
TER
Atoms:
OP1: (-83.654,-34.883,83.242)
OP2: (-84.708,-35.800,85.375)
C3': (-82.551,-39.803,82.396)
C1': (-81.436,-40.599,84.254)
C5': (-82.199,-37.336,82.972)
O6: (-85.402,-43.190,87.949)
O4': (-81.270,-39.197,84.213)
C8: (-83.277,-40.060,85.927)
C2: (-82.969,-44.419,85.699)
C6: (-84.501,-43.141,87.109)
C5: (-83.901,-42.013,86.520)
C4: (-82.904,-42.201,85.596)
P: (-83.534,-35.681,84.488)
C4': (-81.624,-38.721,82.892)
C2': (-81.831,-41.041,82.860)
O2': (-80.651,-41.250,82.108)
N1: (-83.950,-44.316,86.632)
N2: (-82.583,-45.646,85.380)
N3: (-82.403,-43.386,85.143)
N7: (-84.126,-40.668,86.718)
N9: (-82.491,-40.923,85.228)
O5': (-82.955,-37.130,84.154)
O3': (-82.811,-39.763,81.008)
OP2: (-84.708,-35.800,85.375)
C3': (-82.551,-39.803,82.396)
C1': (-81.436,-40.599,84.254)
C5': (-82.199,-37.336,82.972)
O6: (-85.402,-43.190,87.949)
O4': (-81.270,-39.197,84.213)
C8: (-83.277,-40.060,85.927)
C2: (-82.969,-44.419,85.699)
C6: (-84.501,-43.141,87.109)
C5: (-83.901,-42.013,86.520)
C4: (-82.904,-42.201,85.596)
P: (-83.534,-35.681,84.488)
C4': (-81.624,-38.721,82.892)
C2': (-81.831,-41.041,82.860)
O2': (-80.651,-41.250,82.108)
N1: (-83.950,-44.316,86.632)
N2: (-82.583,-45.646,85.380)
N3: (-82.403,-43.386,85.143)
N7: (-84.126,-40.668,86.718)
N9: (-82.491,-40.923,85.228)
O5': (-82.955,-37.130,84.154)
O3': (-82.811,-39.763,81.008)
C4: (-81.082,-51.656,86.119)
N3: (-80.881,-52.858,85.498)
OP1: (-79.285,-46.130,81.272)
OP2: (-81.200,-46.811,82.811)
C2: (-80.247,-53.074,84.311)
C1': (-79.084,-52.136,82.365)
C3': (-80.042,-50.641,80.826)
O5': (-79.345,-48.413,82.308)
O4': (-78.183,-51.066,82.169)
C5': (-78.398,-48.817,81.356)
P: (-79.770,-46.902,82.440)
C4': (-78.601,-50.256,81.033)
C2': (-80.082,-52.109,81.210)
O2': (-79.602,-52.929,80.154)
N1: (-79.756,-51.953,83.672)
O4: (-81.683,-51.649,87.191)
O2: (-80.159,-54.200,83.869)
C6: (-79.935,-50.715,84.229)
C5: (-80.558,-50.531,85.407)
O3': (-80.513,-50.375,79.533)
N3: (-80.881,-52.858,85.498)
OP1: (-79.285,-46.130,81.272)
OP2: (-81.200,-46.811,82.811)
C2: (-80.247,-53.074,84.311)
C1': (-79.084,-52.136,82.365)
C3': (-80.042,-50.641,80.826)
O5': (-79.345,-48.413,82.308)
O4': (-78.183,-51.066,82.169)
C5': (-78.398,-48.817,81.356)
P: (-79.770,-46.902,82.440)
C4': (-78.601,-50.256,81.033)
C2': (-80.082,-52.109,81.210)
O2': (-79.602,-52.929,80.154)
N1: (-79.756,-51.953,83.672)
O4: (-81.683,-51.649,87.191)
O2: (-80.159,-54.200,83.869)
C6: (-79.935,-50.715,84.229)
C5: (-80.558,-50.531,85.407)
O3': (-80.513,-50.375,79.533)
Image (generated by PyMOL):