Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2562:A1123
Extra
PDB:
ATOM 1 O3' G A2561 -59.081 104.224 163.119 1.00 0.01 O
ATOM 2 P G A2562 -57.866 105.149 163.527 1.00 0.07 P
ATOM 3 OP1 G A2562 -58.087 106.453 162.881 1.00 0.07 O
ATOM 4 OP2 G A2562 -56.639 104.402 163.218 1.00 0.07 O
ATOM 5 O5' G A2562 -58.041 105.269 165.106 1.00 0.07 O
ATOM 6 C5' G A2562 -59.192 105.887 165.657 1.00 0.07 C
ATOM 7 C4' G A2562 -59.146 105.969 167.173 1.00 0.07 C
ATOM 8 O4' G A2562 -59.226 104.647 167.763 1.00 0.07 O
ATOM 9 C3' G A2562 -57.893 106.566 167.786 1.00 0.07 C
ATOM 10 O3' G A2562 -57.863 107.986 167.725 1.00 0.07 O
ATOM 11 C2' G A2562 -57.973 106.025 169.196 1.00 0.07 C
ATOM 12 O2' G A2562 -58.990 106.701 169.924 1.00 0.07 O
ATOM 13 C1' G A2562 -58.438 104.606 168.925 1.00 0.07 C
ATOM 14 N9 G A2562 -57.312 103.715 168.669 1.00 0.01 N
ATOM 15 C8 G A2562 -56.922 103.244 167.466 1.00 0.01 C
ATOM 16 N7 G A2562 -55.897 102.457 167.544 1.00 0.01 N
ATOM 17 C5 G A2562 -55.610 102.417 168.884 1.00 0.01 C
ATOM 18 C6 G A2562 -54.590 101.730 169.573 1.00 0.01 C
ATOM 19 O6 G A2562 -53.711 100.997 169.115 1.00 0.01 O
ATOM 20 N1 G A2562 -54.671 101.975 170.933 1.00 0.01 N
ATOM 21 C2 G A2562 -55.608 102.771 171.553 1.00 0.01 C
ATOM 22 N2 G A2562 -55.527 102.887 172.892 1.00 0.01 N
ATOM 23 N3 G A2562 -56.564 103.416 170.904 1.00 0.01 N
ATOM 24 C4 G A2562 -56.489 103.189 169.590 1.00 0.01 C
ATOM 25 P U A2563 -56.482 108.741 167.445 1.00 0.01 P
ATOM 26 OP1 U A2563 -56.758 110.193 167.507 1.00 0.01 O
ATOM 27 OP2 U A2563 -55.918 108.173 166.204 1.00 0.01 O
ATOM 28 O5' U A2563 -55.597 108.302 168.684 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -59.321 103.698 175.377 1.00 0.02 O
ATOM 2 P U B1123 -58.243 104.824 175.630 1.00 0.01 P
ATOM 3 OP1 U B1123 -58.983 106.064 175.960 1.00 0.01 O
ATOM 4 OP2 U B1123 -57.330 104.810 174.450 1.00 0.01 O
ATOM 5 O5' U B1123 -57.471 104.291 176.910 1.00 0.01 O
ATOM 6 C5' U B1123 -56.933 102.979 176.943 1.00 0.01 C
ATOM 7 C4' U B1123 -56.331 102.697 178.277 1.00 0.01 C
ATOM 8 O4' U B1123 -55.460 103.811 178.632 1.00 0.01 O
ATOM 9 C3' U B1123 -57.345 102.609 179.412 1.00 0.01 C
ATOM 10 O3' U B1123 -56.832 101.774 180.459 1.00 0.01 O
ATOM 11 C2' U B1123 -57.383 104.054 179.881 1.00 0.01 C
ATOM 12 O2' U B1123 -57.938 104.263 181.153 1.00 0.01 O
ATOM 13 C1' U B1123 -55.915 104.381 179.838 1.00 0.01 C
ATOM 14 N1 U B1123 -55.642 105.790 179.816 1.00 0.04 N
ATOM 15 C2 U B1123 -54.728 106.317 180.741 1.00 0.04 C
ATOM 16 O2 U B1123 -54.100 105.683 181.603 1.00 0.04 O
ATOM 17 N3 U B1123 -54.566 107.682 180.607 1.00 0.04 N
ATOM 18 C4 U B1123 -55.202 108.519 179.729 1.00 0.04 C
ATOM 19 O4 U B1123 -54.943 109.704 179.793 1.00 0.04 O
ATOM 20 C5 U B1123 -56.120 107.892 178.833 1.00 0.04 C
ATOM 21 C6 U B1123 -56.310 106.569 178.906 1.00 0.04 C
ATOM 22 P G B1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 23 OP1 G B1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 24 OP2 G B1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 25 O5' G B1124 -58.874 101.163 181.771 1.00 0.01 O
TER
ATOM 2 P G A2562 -57.866 105.149 163.527 1.00 0.07 P
ATOM 3 OP1 G A2562 -58.087 106.453 162.881 1.00 0.07 O
ATOM 4 OP2 G A2562 -56.639 104.402 163.218 1.00 0.07 O
ATOM 5 O5' G A2562 -58.041 105.269 165.106 1.00 0.07 O
ATOM 6 C5' G A2562 -59.192 105.887 165.657 1.00 0.07 C
ATOM 7 C4' G A2562 -59.146 105.969 167.173 1.00 0.07 C
ATOM 8 O4' G A2562 -59.226 104.647 167.763 1.00 0.07 O
ATOM 9 C3' G A2562 -57.893 106.566 167.786 1.00 0.07 C
ATOM 10 O3' G A2562 -57.863 107.986 167.725 1.00 0.07 O
ATOM 11 C2' G A2562 -57.973 106.025 169.196 1.00 0.07 C
ATOM 12 O2' G A2562 -58.990 106.701 169.924 1.00 0.07 O
ATOM 13 C1' G A2562 -58.438 104.606 168.925 1.00 0.07 C
ATOM 14 N9 G A2562 -57.312 103.715 168.669 1.00 0.01 N
ATOM 15 C8 G A2562 -56.922 103.244 167.466 1.00 0.01 C
ATOM 16 N7 G A2562 -55.897 102.457 167.544 1.00 0.01 N
ATOM 17 C5 G A2562 -55.610 102.417 168.884 1.00 0.01 C
ATOM 18 C6 G A2562 -54.590 101.730 169.573 1.00 0.01 C
ATOM 19 O6 G A2562 -53.711 100.997 169.115 1.00 0.01 O
ATOM 20 N1 G A2562 -54.671 101.975 170.933 1.00 0.01 N
ATOM 21 C2 G A2562 -55.608 102.771 171.553 1.00 0.01 C
ATOM 22 N2 G A2562 -55.527 102.887 172.892 1.00 0.01 N
ATOM 23 N3 G A2562 -56.564 103.416 170.904 1.00 0.01 N
ATOM 24 C4 G A2562 -56.489 103.189 169.590 1.00 0.01 C
ATOM 25 P U A2563 -56.482 108.741 167.445 1.00 0.01 P
ATOM 26 OP1 U A2563 -56.758 110.193 167.507 1.00 0.01 O
ATOM 27 OP2 U A2563 -55.918 108.173 166.204 1.00 0.01 O
ATOM 28 O5' U A2563 -55.597 108.302 168.684 1.00 0.01 O
TER
ATOM 1 O3' A B1122 -59.321 103.698 175.377 1.00 0.02 O
ATOM 2 P U B1123 -58.243 104.824 175.630 1.00 0.01 P
ATOM 3 OP1 U B1123 -58.983 106.064 175.960 1.00 0.01 O
ATOM 4 OP2 U B1123 -57.330 104.810 174.450 1.00 0.01 O
ATOM 5 O5' U B1123 -57.471 104.291 176.910 1.00 0.01 O
ATOM 6 C5' U B1123 -56.933 102.979 176.943 1.00 0.01 C
ATOM 7 C4' U B1123 -56.331 102.697 178.277 1.00 0.01 C
ATOM 8 O4' U B1123 -55.460 103.811 178.632 1.00 0.01 O
ATOM 9 C3' U B1123 -57.345 102.609 179.412 1.00 0.01 C
ATOM 10 O3' U B1123 -56.832 101.774 180.459 1.00 0.01 O
ATOM 11 C2' U B1123 -57.383 104.054 179.881 1.00 0.01 C
ATOM 12 O2' U B1123 -57.938 104.263 181.153 1.00 0.01 O
ATOM 13 C1' U B1123 -55.915 104.381 179.838 1.00 0.01 C
ATOM 14 N1 U B1123 -55.642 105.790 179.816 1.00 0.04 N
ATOM 15 C2 U B1123 -54.728 106.317 180.741 1.00 0.04 C
ATOM 16 O2 U B1123 -54.100 105.683 181.603 1.00 0.04 O
ATOM 17 N3 U B1123 -54.566 107.682 180.607 1.00 0.04 N
ATOM 18 C4 U B1123 -55.202 108.519 179.729 1.00 0.04 C
ATOM 19 O4 U B1123 -54.943 109.704 179.793 1.00 0.04 O
ATOM 20 C5 U B1123 -56.120 107.892 178.833 1.00 0.04 C
ATOM 21 C6 U B1123 -56.310 106.569 178.906 1.00 0.04 C
ATOM 22 P G B1124 -57.676 100.509 180.979 1.00 0.01 P
ATOM 23 OP1 G B1124 -56.822 99.776 181.902 1.00 0.01 O
ATOM 24 OP2 G B1124 -58.200 99.813 179.789 1.00 0.01 O
ATOM 25 O5' G B1124 -58.874 101.163 181.771 1.00 0.01 O
TER
Atoms:
OP1: (-58.087,106.453,162.881)
OP2: (-56.639,104.402,163.218)
C3': (-57.893,106.566,167.786)
C1': (-58.438,104.606,168.925)
C5': (-59.192,105.887,165.657)
O6: (-53.711,100.997,169.115)
O4': (-59.226,104.647,167.763)
C8: (-56.922,103.244,167.466)
C2: (-55.608,102.771,171.553)
C6: (-54.590,101.730,169.573)
C5: (-55.610,102.417,168.884)
C4: (-56.489,103.189,169.590)
P: (-57.866,105.149,163.527)
C4': (-59.146,105.969,167.173)
C2': (-57.973,106.025,169.196)
O2': (-58.990,106.701,169.924)
N1: (-54.671,101.975,170.933)
N2: (-55.527,102.887,172.892)
N3: (-56.564,103.416,170.904)
N7: (-55.897,102.457,167.544)
N9: (-57.312,103.715,168.669)
O5': (-58.041,105.269,165.106)
O3': (-57.863,107.986,167.725)
OP2: (-56.639,104.402,163.218)
C3': (-57.893,106.566,167.786)
C1': (-58.438,104.606,168.925)
C5': (-59.192,105.887,165.657)
O6: (-53.711,100.997,169.115)
O4': (-59.226,104.647,167.763)
C8: (-56.922,103.244,167.466)
C2: (-55.608,102.771,171.553)
C6: (-54.590,101.730,169.573)
C5: (-55.610,102.417,168.884)
C4: (-56.489,103.189,169.590)
P: (-57.866,105.149,163.527)
C4': (-59.146,105.969,167.173)
C2': (-57.973,106.025,169.196)
O2': (-58.990,106.701,169.924)
N1: (-54.671,101.975,170.933)
N2: (-55.527,102.887,172.892)
N3: (-56.564,103.416,170.904)
N7: (-55.897,102.457,167.544)
N9: (-57.312,103.715,168.669)
O5': (-58.041,105.269,165.106)
O3': (-57.863,107.986,167.725)
C4: (-55.202,108.519,179.729)
N3: (-54.566,107.682,180.607)
OP1: (-58.983,106.064,175.960)
OP2: (-57.330,104.810,174.450)
C2: (-54.728,106.317,180.741)
C1': (-55.915,104.381,179.838)
C3': (-57.345,102.609,179.412)
O5': (-57.471,104.291,176.910)
O4': (-55.460,103.811,178.632)
C5': (-56.933,102.979,176.943)
P: (-58.243,104.824,175.630)
C4': (-56.331,102.697,178.277)
C2': (-57.383,104.054,179.881)
O2': (-57.938,104.263,181.153)
N1: (-55.642,105.790,179.816)
O4: (-54.943,109.704,179.793)
O2: (-54.100,105.683,181.603)
C6: (-56.310,106.569,178.906)
C5: (-56.120,107.892,178.833)
O3': (-56.832,101.774,180.459)
N3: (-54.566,107.682,180.607)
OP1: (-58.983,106.064,175.960)
OP2: (-57.330,104.810,174.450)
C2: (-54.728,106.317,180.741)
C1': (-55.915,104.381,179.838)
C3': (-57.345,102.609,179.412)
O5': (-57.471,104.291,176.910)
O4': (-55.460,103.811,178.632)
C5': (-56.933,102.979,176.943)
P: (-58.243,104.824,175.630)
C4': (-56.331,102.697,178.277)
C2': (-57.383,104.054,179.881)
O2': (-57.938,104.263,181.153)
N1: (-55.642,105.790,179.816)
O4: (-54.943,109.704,179.793)
O2: (-54.100,105.683,181.603)
C6: (-56.310,106.569,178.906)
C5: (-56.120,107.892,178.833)
O3': (-56.832,101.774,180.459)
Image (generated by PyMOL):