ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:12691:11249

Extra

PDB:
ATOM 1 O3' G A2690 18.779 12.353 43.335 1.00 41.79 O
ATOM 2 P G A2691 19.483 12.867 44.676 1.00 42.22 P
ATOM 3 OP1 G A2691 19.379 11.792 45.707 1.00 41.95 O
ATOM 4 OP2 G A2691 18.916 14.201 44.969 1.00 42.44 O
ATOM 5 O5' G A2691 20.986 12.981 44.177 1.00 42.12 O
ATOM 6 C5' G A2691 21.569 11.908 43.471 1.00 42.01 C
ATOM 7 C4' G A2691 22.927 12.263 43.005 1.00 41.97 C
ATOM 8 O4' G A2691 22.848 13.344 42.040 1.00 42.27 O
ATOM 9 C3' G A2691 23.857 12.802 44.070 1.00 41.78 C
ATOM 10 O3' G A2691 24.408 11.775 44.864 1.00 41.47 O
ATOM 11 C2' G A2691 24.883 13.523 43.225 1.00 41.89 C
ATOM 12 O2' G A2691 25.710 12.584 42.556 1.00 41.77 O
ATOM 13 C1' G A2691 23.986 14.182 42.186 1.00 42.23 C
ATOM 14 N9 G A2691 23.550 15.519 42.624 1.00 42.41 N
ATOM 15 C8 G A2691 22.338 15.891 43.118 1.00 42.53 C
ATOM 16 N7 G A2691 22.292 17.147 43.430 1.00 42.69 N
ATOM 17 C5 G A2691 23.516 17.652 43.136 1.00 42.68 C
ATOM 18 C6 G A2691 24.017 18.964 43.285 1.00 42.82 C
ATOM 19 O6 G A2691 23.426 19.954 43.707 1.00 43.00 O
ATOM 20 N1 G A2691 25.339 19.035 42.877 1.00 42.75 N
ATOM 21 C2 G A2691 26.053 17.951 42.361 1.00 42.57 C
ATOM 22 N2 G A2691 27.315 18.150 41.984 1.00 42.53 N
ATOM 23 N3 G A2691 25.592 16.718 42.208 1.00 42.44 N
ATOM 24 C4 G A2691 24.317 16.641 42.633 1.00 42.50 C
ATOM 25 P A A2692 24.872 12.047 46.369 1.00 37.75 P
ATOM 26 OP1 A A2692 25.450 10.798 46.836 1.00 37.48 O
ATOM 27 OP2 A A2692 23.708 12.640 47.127 1.00 37.86 O
ATOM 28 O5' A A2692 26.011 13.126 46.193 1.00 37.80 O
TER

ATOM 1 O3' A B1248 29.358 15.866 39.084 1.00 35.83 O
ATOM 2 P U B1249 30.276 15.858 40.396 1.00 36.74 P
ATOM 3 OP1 U B1249 31.102 14.625 40.360 1.00 36.50 O
ATOM 4 OP2 U B1249 29.380 16.087 41.563 1.00 36.67 O
ATOM 5 O5' U B1249 31.219 17.106 40.182 1.00 36.89 O
ATOM 6 C5' U B1249 30.708 18.422 40.155 1.00 37.15 C
ATOM 7 C4' U B1249 31.814 19.432 40.071 1.00 37.24 C
ATOM 8 O4' U B1249 32.673 19.261 41.208 1.00 36.97 O
ATOM 9 C3' U B1249 32.714 19.309 38.853 1.00 37.35 C
ATOM 10 O3' U B1249 33.237 20.573 38.545 1.00 37.58 O
ATOM 11 C2' U B1249 33.844 18.455 39.379 1.00 37.04 C
ATOM 12 O2' U B1249 35.056 18.531 38.643 1.00 37.09 O
ATOM 13 C1' U B1249 33.992 19.031 40.759 1.00 36.91 C
ATOM 14 N1 U B1249 34.642 18.145 41.693 1.00 36.58 N
ATOM 15 C2 U B1249 35.984 18.221 41.996 1.00 36.46 C
ATOM 16 O2 U B1249 36.855 18.968 41.559 1.00 36.60 O
ATOM 17 N3 U B1249 36.369 17.301 42.887 1.00 36.17 N
ATOM 18 C4 U B1249 35.599 16.389 43.492 1.00 35.99 C
ATOM 19 O4 U B1249 36.169 15.694 44.268 1.00 35.75 O
ATOM 20 C5 U B1249 34.246 16.362 43.161 1.00 36.11 C
ATOM 21 C6 U B1249 33.814 17.248 42.275 1.00 36.40 C
ATOM 22 P G B1250 32.863 21.283 37.171 1.00 38.55 P
ATOM 23 OP1 G B1250 33.105 22.731 37.366 1.00 38.77 O
ATOM 24 OP2 G B1250 31.491 20.811 36.805 1.00 38.64 O
ATOM 25 O5' G B1250 33.916 20.710 36.140 1.00 38.55 O
TER

Atoms:
OP1: (19.379,11.792,45.707)
OP2: (18.916,14.201,44.969)
C3': (23.857,12.802,44.070)
C1': (23.986,14.182,42.186)
C5': (21.569,11.908,43.471)
O6: (23.426,19.954,43.707)
O4': (22.848,13.344,42.040)
C8: (22.338,15.891,43.118)
C2: (26.053,17.951,42.361)
C6: (24.017,18.964,43.285)
C5: (23.516,17.652,43.136)
C4: (24.317,16.641,42.633)
P: (19.483,12.867,44.676)
C4': (22.927,12.263,43.005)
C2': (24.883,13.523,43.225)
O2': (25.710,12.584,42.556)
N1: (25.339,19.035,42.877)
N2: (27.315,18.150,41.984)
N3: (25.592,16.718,42.208)
N7: (22.292,17.147,43.430)
N9: (23.550,15.519,42.624)
O5': (20.986,12.981,44.177)
O3': (24.408,11.775,44.864)
C4: (35.599,16.389,43.492)
N3: (36.369,17.301,42.887)
OP1: (31.102,14.625,40.360)
OP2: (29.380,16.087,41.563)
C2: (35.984,18.221,41.996)
C1': (33.992,19.031,40.759)
C3': (32.714,19.309,38.853)
O5': (31.219,17.106,40.182)
O4': (32.673,19.261,41.208)
C5': (30.708,18.422,40.155)
P: (30.276,15.858,40.396)
C4': (31.814,19.432,40.071)
C2': (33.844,18.455,39.379)
O2': (35.056,18.531,38.643)
N1: (34.642,18.145,41.693)
O4: (36.169,15.694,44.268)
O2: (36.855,18.968,41.559)
C6: (33.814,17.248,42.275)
C5: (34.246,16.362,43.161)
O3': (33.237,20.573,38.545)
Image (generated by PyMOL):
PyMOL image
show in jmol