Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1878:134
Extra
PDB:
ATOM 1 O3' A A 877 50.295 -12.128 88.472 1.00 34.70 O
ATOM 2 P G A 878 48.760 -11.681 88.372 1.00 32.13 P
ATOM 3 OP1 G A 878 48.579 -11.341 86.954 1.00 31.92 O
ATOM 4 OP2 G A 878 48.472 -10.682 89.422 1.00 32.27 O
ATOM 5 O5' G A 878 47.914 -12.981 88.620 1.00 32.15 O
ATOM 6 C5' G A 878 48.363 -14.048 89.384 1.00 32.32 C
ATOM 7 C4' G A 878 47.282 -15.063 89.457 1.00 32.31 C
ATOM 8 O4' G A 878 46.096 -14.442 90.013 1.00 32.33 O
ATOM 9 C3' G A 878 46.847 -15.613 88.119 1.00 32.11 C
ATOM 10 O3' G A 878 47.633 -16.728 87.732 1.00 32.14 O
ATOM 11 C2' G A 878 45.416 -15.977 88.388 1.00 32.12 C
ATOM 12 O2' G A 878 45.385 -17.158 89.114 1.00 32.27 O
ATOM 13 C1' G A 878 44.976 -14.882 89.335 1.00 32.20 C
ATOM 14 N9 G A 878 44.359 -13.727 88.666 1.00 32.05 N
ATOM 15 C8 G A 878 44.780 -12.445 88.854 1.00 32.07 C
ATOM 16 N7 G A 878 44.064 -11.566 88.219 1.00 31.94 N
ATOM 17 C5 G A 878 43.082 -12.313 87.623 1.00 31.85 C
ATOM 18 C6 G A 878 42.003 -11.917 86.839 1.00 31.72 C
ATOM 19 O6 G A 878 41.703 -10.804 86.516 1.00 31.66 O
ATOM 20 N1 G A 878 41.227 -12.941 86.387 1.00 31.66 N
ATOM 21 C2 G A 878 41.435 -14.239 86.691 1.00 31.74 C
ATOM 22 N2 G A 878 40.549 -15.121 86.183 1.00 31.69 N
ATOM 23 N3 G A 878 42.422 -14.627 87.461 1.00 31.87 N
ATOM 24 C4 G A 878 43.223 -13.635 87.887 1.00 31.91 C
ATOM 25 P U A 879 48.422 -16.780 86.332 1.00 35.49 P
ATOM 26 OP1 U A 879 49.422 -17.892 86.439 1.00 35.61 O
ATOM 27 OP2 U A 879 48.889 -15.415 86.027 1.00 35.41 O
ATOM 28 O5' U A 879 47.283 -17.206 85.322 1.00 35.33 O
TER
ATOM 1 O3' C B 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 2 P U B 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 3 OP1 U B 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 4 OP2 U B 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 5 O5' U B 34 41.464 -19.585 88.004 1.00 32.42 O
ATOM 6 C5' U B 34 42.724 -19.107 87.579 1.00 32.35 C
ATOM 7 C4' U B 34 43.813 -20.042 87.977 1.00 32.49 C
ATOM 8 O4' U B 34 43.636 -20.420 89.362 1.00 32.71 O
ATOM 9 C3' U B 34 43.811 -21.341 87.270 1.00 32.48 C
ATOM 10 O3' U B 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 11 C2' U B 34 44.604 -22.217 88.226 1.00 32.70 C
ATOM 12 O2' U B 34 45.956 -21.847 88.210 1.00 32.72 O
ATOM 13 C1' U B 34 44.055 -21.745 89.553 1.00 32.84 C
ATOM 14 N1 U B 34 42.905 -22.523 90.008 1.00 32.94 N
ATOM 15 C2 U B 34 43.165 -23.708 90.560 1.00 33.13 C
ATOM 16 O2 U B 34 44.296 -24.026 90.626 1.00 33.20 O
ATOM 17 N3 U B 34 42.097 -24.449 91.000 1.00 33.23 N
ATOM 18 C4 U B 34 40.776 -24.048 90.919 1.00 33.16 C
ATOM 19 O4 U B 34 39.886 -24.754 91.356 1.00 33.28 O
ATOM 20 C5 U B 34 40.582 -22.772 90.332 1.00 32.96 C
ATOM 21 C6 U B 34 41.616 -22.047 89.908 1.00 32.86 C
ATOM 22 P U B 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 23 OP1 U B 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 24 OP2 U B 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 25 O5' U B 35 44.120 -23.522 85.177 1.00 32.61 O
TER
ATOM 2 P G A 878 48.760 -11.681 88.372 1.00 32.13 P
ATOM 3 OP1 G A 878 48.579 -11.341 86.954 1.00 31.92 O
ATOM 4 OP2 G A 878 48.472 -10.682 89.422 1.00 32.27 O
ATOM 5 O5' G A 878 47.914 -12.981 88.620 1.00 32.15 O
ATOM 6 C5' G A 878 48.363 -14.048 89.384 1.00 32.32 C
ATOM 7 C4' G A 878 47.282 -15.063 89.457 1.00 32.31 C
ATOM 8 O4' G A 878 46.096 -14.442 90.013 1.00 32.33 O
ATOM 9 C3' G A 878 46.847 -15.613 88.119 1.00 32.11 C
ATOM 10 O3' G A 878 47.633 -16.728 87.732 1.00 32.14 O
ATOM 11 C2' G A 878 45.416 -15.977 88.388 1.00 32.12 C
ATOM 12 O2' G A 878 45.385 -17.158 89.114 1.00 32.27 O
ATOM 13 C1' G A 878 44.976 -14.882 89.335 1.00 32.20 C
ATOM 14 N9 G A 878 44.359 -13.727 88.666 1.00 32.05 N
ATOM 15 C8 G A 878 44.780 -12.445 88.854 1.00 32.07 C
ATOM 16 N7 G A 878 44.064 -11.566 88.219 1.00 31.94 N
ATOM 17 C5 G A 878 43.082 -12.313 87.623 1.00 31.85 C
ATOM 18 C6 G A 878 42.003 -11.917 86.839 1.00 31.72 C
ATOM 19 O6 G A 878 41.703 -10.804 86.516 1.00 31.66 O
ATOM 20 N1 G A 878 41.227 -12.941 86.387 1.00 31.66 N
ATOM 21 C2 G A 878 41.435 -14.239 86.691 1.00 31.74 C
ATOM 22 N2 G A 878 40.549 -15.121 86.183 1.00 31.69 N
ATOM 23 N3 G A 878 42.422 -14.627 87.461 1.00 31.87 N
ATOM 24 C4 G A 878 43.223 -13.635 87.887 1.00 31.91 C
ATOM 25 P U A 879 48.422 -16.780 86.332 1.00 35.49 P
ATOM 26 OP1 U A 879 49.422 -17.892 86.439 1.00 35.61 O
ATOM 27 OP2 U A 879 48.889 -15.415 86.027 1.00 35.41 O
ATOM 28 O5' U A 879 47.283 -17.206 85.322 1.00 35.33 O
TER
ATOM 1 O3' C B 33 40.249 -17.614 88.860 1.00 38.20 O
ATOM 2 P U B 34 40.175 -18.726 87.745 1.00 32.32 P
ATOM 3 OP1 U B 34 40.268 -18.041 86.462 1.00 32.11 O
ATOM 4 OP2 U B 34 38.998 -19.529 88.030 1.00 32.39 O
ATOM 5 O5' U B 34 41.464 -19.585 88.004 1.00 32.42 O
ATOM 6 C5' U B 34 42.724 -19.107 87.579 1.00 32.35 C
ATOM 7 C4' U B 34 43.813 -20.042 87.977 1.00 32.49 C
ATOM 8 O4' U B 34 43.636 -20.420 89.362 1.00 32.71 O
ATOM 9 C3' U B 34 43.811 -21.341 87.270 1.00 32.48 C
ATOM 10 O3' U B 34 44.340 -21.234 85.986 1.00 32.32 O
ATOM 11 C2' U B 34 44.604 -22.217 88.226 1.00 32.70 C
ATOM 12 O2' U B 34 45.956 -21.847 88.210 1.00 32.72 O
ATOM 13 C1' U B 34 44.055 -21.745 89.553 1.00 32.84 C
ATOM 14 N1 U B 34 42.905 -22.523 90.008 1.00 32.94 N
ATOM 15 C2 U B 34 43.165 -23.708 90.560 1.00 33.13 C
ATOM 16 O2 U B 34 44.296 -24.026 90.626 1.00 33.20 O
ATOM 17 N3 U B 34 42.097 -24.449 91.000 1.00 33.23 N
ATOM 18 C4 U B 34 40.776 -24.048 90.919 1.00 33.16 C
ATOM 19 O4 U B 34 39.886 -24.754 91.356 1.00 33.28 O
ATOM 20 C5 U B 34 40.582 -22.772 90.332 1.00 32.96 C
ATOM 21 C6 U B 34 41.616 -22.047 89.908 1.00 32.86 C
ATOM 22 P U B 35 43.681 -22.066 84.811 1.00 32.44 P
ATOM 23 OP1 U B 35 44.290 -21.642 83.534 1.00 32.28 O
ATOM 24 OP2 U B 35 42.192 -21.956 84.961 1.00 32.42 O
ATOM 25 O5' U B 35 44.120 -23.522 85.177 1.00 32.61 O
TER
Atoms:
OP1: (48.579,-11.341,86.954)
OP2: (48.472,-10.682,89.422)
C3': (46.847,-15.613,88.119)
C1': (44.976,-14.882,89.335)
C5': (48.363,-14.048,89.384)
O6: (41.703,-10.804,86.516)
O4': (46.096,-14.442,90.013)
C8: (44.780,-12.445,88.854)
C2: (41.435,-14.239,86.691)
C6: (42.003,-11.917,86.839)
C5: (43.082,-12.313,87.623)
C4: (43.223,-13.635,87.887)
P: (48.760,-11.681,88.372)
C4': (47.282,-15.063,89.457)
C2': (45.416,-15.977,88.388)
O2': (45.385,-17.158,89.114)
N1: (41.227,-12.941,86.387)
N2: (40.549,-15.121,86.183)
N3: (42.422,-14.627,87.461)
N7: (44.064,-11.566,88.219)
N9: (44.359,-13.727,88.666)
O5': (47.914,-12.981,88.620)
O3': (47.633,-16.728,87.732)
OP2: (48.472,-10.682,89.422)
C3': (46.847,-15.613,88.119)
C1': (44.976,-14.882,89.335)
C5': (48.363,-14.048,89.384)
O6: (41.703,-10.804,86.516)
O4': (46.096,-14.442,90.013)
C8: (44.780,-12.445,88.854)
C2: (41.435,-14.239,86.691)
C6: (42.003,-11.917,86.839)
C5: (43.082,-12.313,87.623)
C4: (43.223,-13.635,87.887)
P: (48.760,-11.681,88.372)
C4': (47.282,-15.063,89.457)
C2': (45.416,-15.977,88.388)
O2': (45.385,-17.158,89.114)
N1: (41.227,-12.941,86.387)
N2: (40.549,-15.121,86.183)
N3: (42.422,-14.627,87.461)
N7: (44.064,-11.566,88.219)
N9: (44.359,-13.727,88.666)
O5': (47.914,-12.981,88.620)
O3': (47.633,-16.728,87.732)
C4: (40.776,-24.048,90.919)
N3: (42.097,-24.449,91.000)
OP1: (40.268,-18.041,86.462)
OP2: (38.998,-19.529,88.030)
C2: (43.165,-23.708,90.560)
C1': (44.055,-21.745,89.553)
C3': (43.811,-21.341,87.270)
O5': (41.464,-19.585,88.004)
O4': (43.636,-20.420,89.362)
C5': (42.724,-19.107,87.579)
P: (40.175,-18.726,87.745)
C4': (43.813,-20.042,87.977)
C2': (44.604,-22.217,88.226)
O2': (45.956,-21.847,88.210)
N1: (42.905,-22.523,90.008)
O4: (39.886,-24.754,91.356)
O2: (44.296,-24.026,90.626)
C6: (41.616,-22.047,89.908)
C5: (40.582,-22.772,90.332)
O3': (44.340,-21.234,85.986)
N3: (42.097,-24.449,91.000)
OP1: (40.268,-18.041,86.462)
OP2: (38.998,-19.529,88.030)
C2: (43.165,-23.708,90.560)
C1': (44.055,-21.745,89.553)
C3': (43.811,-21.341,87.270)
O5': (41.464,-19.585,88.004)
O4': (43.636,-20.420,89.362)
C5': (42.724,-19.107,87.579)
P: (40.175,-18.726,87.745)
C4': (43.813,-20.042,87.977)
C2': (44.604,-22.217,88.226)
O2': (45.956,-21.847,88.210)
N1: (42.905,-22.523,90.008)
O4: (39.886,-24.754,91.356)
O2: (44.296,-24.026,90.626)
C6: (41.616,-22.047,89.908)
C5: (40.582,-22.772,90.332)
O3': (44.340,-21.234,85.986)
Image (generated by PyMOL):