Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1945:1985
Extra
PDB:
ATOM 1 O3' C A 944 14.692 -43.455 16.971 1.00 60.98 O
ATOM 2 P G A 945 13.445 -43.076 16.034 1.00 77.95 P
ATOM 3 OP1 G A 945 13.979 -42.343 14.868 1.00 78.11 O
ATOM 4 OP2 G A 945 12.432 -42.413 16.894 1.00 77.67 O
ATOM 5 O5' G A 945 12.949 -44.500 15.562 1.00 78.52 O
ATOM 6 C5' G A 945 13.818 -45.331 14.809 1.00 78.84 C
ATOM 7 C4' G A 945 13.140 -45.880 13.592 1.00 79.51 C
ATOM 8 O4' G A 945 13.050 -44.856 12.568 1.00 79.66 O
ATOM 9 C3' G A 945 13.854 -47.014 12.897 1.00 79.93 C
ATOM 10 O3' G A 945 13.680 -48.259 13.547 1.00 80.03 O
ATOM 11 C2' G A 945 13.257 -46.972 11.495 1.00 80.54 C
ATOM 12 O2' G A 945 11.992 -47.629 11.473 1.00 80.91 O
ATOM 13 C1' G A 945 13.036 -45.465 11.293 1.00 80.28 C
ATOM 14 N9 G A 945 14.076 -44.844 10.429 1.00 80.29 N
ATOM 15 C8 G A 945 15.037 -43.902 10.731 1.00 79.81 C
ATOM 16 N7 G A 945 15.806 -43.550 9.723 1.00 80.00 N
ATOM 17 C5 G A 945 15.312 -44.303 8.669 1.00 80.65 C
ATOM 18 C6 G A 945 15.715 -44.367 7.298 1.00 81.15 C
ATOM 19 O6 G A 945 16.626 -43.731 6.732 1.00 81.09 O
ATOM 20 N1 G A 945 14.944 -45.273 6.558 1.00 81.78 N
ATOM 21 C2 G A 945 13.912 -46.007 7.086 1.00 81.91 C
ATOM 22 N2 G A 945 13.256 -46.831 6.268 1.00 82.55 N
ATOM 23 N3 G A 945 13.536 -45.945 8.347 1.00 81.45 N
ATOM 24 C4 G A 945 14.264 -45.091 9.089 1.00 80.84 C
ATOM 25 P A A 946 14.952 -48.989 14.201 1.00 63.57 P
ATOM 26 OP1 A A 946 16.128 -48.656 13.338 1.00 63.63 O
ATOM 27 OP2 A A 946 14.611 -50.422 14.404 1.00 63.93 O
ATOM 28 O5' A A 946 15.044 -48.242 15.616 1.00 62.87 O
TER
ATOM 1 O3' A B 984 9.248 -49.626 8.018 1.00 65.14 O
ATOM 2 P U B 985 10.262 -48.509 8.484 1.00 62.98 P
ATOM 3 OP1 U B 985 11.580 -48.888 7.920 1.00 63.08 O
ATOM 4 OP2 U B 985 10.091 -48.372 9.961 1.00 62.40 O
ATOM 5 O5' U B 985 9.710 -47.186 7.771 1.00 63.03 O
ATOM 6 C5' U B 985 9.913 -45.909 8.354 1.00 62.45 C
ATOM 7 C4' U B 985 9.041 -44.868 7.718 1.00 62.61 C
ATOM 8 O4' U B 985 7.692 -45.045 8.171 1.00 62.72 O
ATOM 9 C3' U B 985 9.333 -43.423 8.089 1.00 62.08 C
ATOM 10 O3' U B 985 10.433 -42.874 7.403 1.00 62.03 O
ATOM 11 C2' U B 985 8.031 -42.743 7.751 1.00 62.30 C
ATOM 12 O2' U B 985 7.891 -42.611 6.352 1.00 62.87 O
ATOM 13 C1' U B 985 7.043 -43.786 8.230 1.00 62.53 C
ATOM 14 N1 U B 985 6.654 -43.533 9.597 1.00 62.01 N
ATOM 15 C2 U B 985 5.976 -42.353 9.836 1.00 61.79 C
ATOM 16 O2 U B 985 5.677 -41.545 8.971 1.00 62.01 O
ATOM 17 N3 U B 985 5.662 -42.118 11.140 1.00 61.30 N
ATOM 18 C4 U B 985 5.977 -42.966 12.176 1.00 61.03 C
ATOM 19 O4 U B 985 5.633 -42.664 13.319 1.00 60.60 O
ATOM 20 C5 U B 985 6.691 -44.159 11.812 1.00 61.29 C
ATOM 21 C6 U B 985 7.012 -44.414 10.558 1.00 61.77 C
ATOM 22 P U B 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 23 OP1 U B 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 24 OP2 U B 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 25 O5' U B 986 10.984 -40.730 8.626 1.00 53.41 O
TER
ATOM 2 P G A 945 13.445 -43.076 16.034 1.00 77.95 P
ATOM 3 OP1 G A 945 13.979 -42.343 14.868 1.00 78.11 O
ATOM 4 OP2 G A 945 12.432 -42.413 16.894 1.00 77.67 O
ATOM 5 O5' G A 945 12.949 -44.500 15.562 1.00 78.52 O
ATOM 6 C5' G A 945 13.818 -45.331 14.809 1.00 78.84 C
ATOM 7 C4' G A 945 13.140 -45.880 13.592 1.00 79.51 C
ATOM 8 O4' G A 945 13.050 -44.856 12.568 1.00 79.66 O
ATOM 9 C3' G A 945 13.854 -47.014 12.897 1.00 79.93 C
ATOM 10 O3' G A 945 13.680 -48.259 13.547 1.00 80.03 O
ATOM 11 C2' G A 945 13.257 -46.972 11.495 1.00 80.54 C
ATOM 12 O2' G A 945 11.992 -47.629 11.473 1.00 80.91 O
ATOM 13 C1' G A 945 13.036 -45.465 11.293 1.00 80.28 C
ATOM 14 N9 G A 945 14.076 -44.844 10.429 1.00 80.29 N
ATOM 15 C8 G A 945 15.037 -43.902 10.731 1.00 79.81 C
ATOM 16 N7 G A 945 15.806 -43.550 9.723 1.00 80.00 N
ATOM 17 C5 G A 945 15.312 -44.303 8.669 1.00 80.65 C
ATOM 18 C6 G A 945 15.715 -44.367 7.298 1.00 81.15 C
ATOM 19 O6 G A 945 16.626 -43.731 6.732 1.00 81.09 O
ATOM 20 N1 G A 945 14.944 -45.273 6.558 1.00 81.78 N
ATOM 21 C2 G A 945 13.912 -46.007 7.086 1.00 81.91 C
ATOM 22 N2 G A 945 13.256 -46.831 6.268 1.00 82.55 N
ATOM 23 N3 G A 945 13.536 -45.945 8.347 1.00 81.45 N
ATOM 24 C4 G A 945 14.264 -45.091 9.089 1.00 80.84 C
ATOM 25 P A A 946 14.952 -48.989 14.201 1.00 63.57 P
ATOM 26 OP1 A A 946 16.128 -48.656 13.338 1.00 63.63 O
ATOM 27 OP2 A A 946 14.611 -50.422 14.404 1.00 63.93 O
ATOM 28 O5' A A 946 15.044 -48.242 15.616 1.00 62.87 O
TER
ATOM 1 O3' A B 984 9.248 -49.626 8.018 1.00 65.14 O
ATOM 2 P U B 985 10.262 -48.509 8.484 1.00 62.98 P
ATOM 3 OP1 U B 985 11.580 -48.888 7.920 1.00 63.08 O
ATOM 4 OP2 U B 985 10.091 -48.372 9.961 1.00 62.40 O
ATOM 5 O5' U B 985 9.710 -47.186 7.771 1.00 63.03 O
ATOM 6 C5' U B 985 9.913 -45.909 8.354 1.00 62.45 C
ATOM 7 C4' U B 985 9.041 -44.868 7.718 1.00 62.61 C
ATOM 8 O4' U B 985 7.692 -45.045 8.171 1.00 62.72 O
ATOM 9 C3' U B 985 9.333 -43.423 8.089 1.00 62.08 C
ATOM 10 O3' U B 985 10.433 -42.874 7.403 1.00 62.03 O
ATOM 11 C2' U B 985 8.031 -42.743 7.751 1.00 62.30 C
ATOM 12 O2' U B 985 7.891 -42.611 6.352 1.00 62.87 O
ATOM 13 C1' U B 985 7.043 -43.786 8.230 1.00 62.53 C
ATOM 14 N1 U B 985 6.654 -43.533 9.597 1.00 62.01 N
ATOM 15 C2 U B 985 5.976 -42.353 9.836 1.00 61.79 C
ATOM 16 O2 U B 985 5.677 -41.545 8.971 1.00 62.01 O
ATOM 17 N3 U B 985 5.662 -42.118 11.140 1.00 61.30 N
ATOM 18 C4 U B 985 5.977 -42.966 12.176 1.00 61.03 C
ATOM 19 O4 U B 985 5.633 -42.664 13.319 1.00 60.60 O
ATOM 20 C5 U B 985 6.691 -44.159 11.812 1.00 61.29 C
ATOM 21 C6 U B 985 7.012 -44.414 10.558 1.00 61.77 C
ATOM 22 P U B 986 11.622 -42.152 8.218 1.00 53.77 P
ATOM 23 OP1 U B 986 12.738 -41.976 7.241 1.00 53.93 O
ATOM 24 OP2 U B 986 11.858 -42.977 9.455 1.00 53.42 O
ATOM 25 O5' U B 986 10.984 -40.730 8.626 1.00 53.41 O
TER
Atoms:
OP1: (13.979,-42.343,14.868)
OP2: (12.432,-42.413,16.894)
C3': (13.854,-47.014,12.897)
C1': (13.036,-45.465,11.293)
C5': (13.818,-45.331,14.809)
O6: (16.626,-43.731,6.732)
O4': (13.050,-44.856,12.568)
C8: (15.037,-43.902,10.731)
C2: (13.912,-46.007,7.086)
C6: (15.715,-44.367,7.298)
C5: (15.312,-44.303,8.669)
C4: (14.264,-45.091,9.089)
P: (13.445,-43.076,16.034)
C4': (13.140,-45.880,13.592)
C2': (13.257,-46.972,11.495)
O2': (11.992,-47.629,11.473)
N1: (14.944,-45.273,6.558)
N2: (13.256,-46.831,6.268)
N3: (13.536,-45.945,8.347)
N7: (15.806,-43.550,9.723)
N9: (14.076,-44.844,10.429)
O5': (12.949,-44.500,15.562)
O3': (13.680,-48.259,13.547)
OP2: (12.432,-42.413,16.894)
C3': (13.854,-47.014,12.897)
C1': (13.036,-45.465,11.293)
C5': (13.818,-45.331,14.809)
O6: (16.626,-43.731,6.732)
O4': (13.050,-44.856,12.568)
C8: (15.037,-43.902,10.731)
C2: (13.912,-46.007,7.086)
C6: (15.715,-44.367,7.298)
C5: (15.312,-44.303,8.669)
C4: (14.264,-45.091,9.089)
P: (13.445,-43.076,16.034)
C4': (13.140,-45.880,13.592)
C2': (13.257,-46.972,11.495)
O2': (11.992,-47.629,11.473)
N1: (14.944,-45.273,6.558)
N2: (13.256,-46.831,6.268)
N3: (13.536,-45.945,8.347)
N7: (15.806,-43.550,9.723)
N9: (14.076,-44.844,10.429)
O5': (12.949,-44.500,15.562)
O3': (13.680,-48.259,13.547)
C4: (5.977,-42.966,12.176)
N3: (5.662,-42.118,11.140)
OP1: (11.580,-48.888,7.920)
OP2: (10.091,-48.372,9.961)
C2: (5.976,-42.353,9.836)
C1': (7.043,-43.786,8.230)
C3': (9.333,-43.423,8.089)
O5': (9.710,-47.186,7.771)
O4': (7.692,-45.045,8.171)
C5': (9.913,-45.909,8.354)
P: (10.262,-48.509,8.484)
C4': (9.041,-44.868,7.718)
C2': (8.031,-42.743,7.751)
O2': (7.891,-42.611,6.352)
N1: (6.654,-43.533,9.597)
O4: (5.633,-42.664,13.319)
O2: (5.677,-41.545,8.971)
C6: (7.012,-44.414,10.558)
C5: (6.691,-44.159,11.812)
O3': (10.433,-42.874,7.403)
N3: (5.662,-42.118,11.140)
OP1: (11.580,-48.888,7.920)
OP2: (10.091,-48.372,9.961)
C2: (5.976,-42.353,9.836)
C1': (7.043,-43.786,8.230)
C3': (9.333,-43.423,8.089)
O5': (9.710,-47.186,7.771)
O4': (7.692,-45.045,8.171)
C5': (9.913,-45.909,8.354)
P: (10.262,-48.509,8.484)
C4': (9.041,-44.868,7.718)
C2': (8.031,-42.743,7.751)
O2': (7.891,-42.611,6.352)
N1: (6.654,-43.533,9.597)
O4: (5.633,-42.664,13.319)
O2: (5.677,-41.545,8.971)
C6: (7.012,-44.414,10.558)
C5: (6.691,-44.159,11.812)
O3': (10.433,-42.874,7.403)
Image (generated by PyMOL):