Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:324:33
Extra
PDB:
ATOM 1 O3' A A 23 21.691 -98.844 13.903 1.00 89.64 O
ATOM 2 P G A 24 20.742 -98.509 15.151 1.00 83.47 P
ATOM 3 OP1 G A 24 21.077 -99.497 16.229 1.00 83.25 O
ATOM 4 OP2 G A 24 19.334 -98.420 14.647 1.00 84.03 O
ATOM 5 O5' G A 24 21.231 -97.079 15.578 1.00 82.27 O
ATOM 6 C5' G A 24 22.343 -96.912 16.420 1.00 81.40 C
ATOM 7 C4' G A 24 22.559 -95.460 16.693 1.00 80.36 C
ATOM 8 O4' G A 24 22.420 -94.703 15.462 1.00 80.79 O
ATOM 9 C3' G A 24 21.554 -94.821 17.610 1.00 79.59 C
ATOM 10 O3' G A 24 21.816 -95.106 18.959 1.00 78.81 O
ATOM 11 C2' G A 24 21.698 -93.351 17.252 1.00 79.00 C
ATOM 12 O2' G A 24 22.904 -92.827 17.790 1.00 78.13 O
ATOM 13 C1' G A 24 21.868 -93.439 15.747 1.00 80.01 C
ATOM 14 N9 G A 24 20.593 -93.313 15.026 1.00 80.66 N
ATOM 15 C8 G A 24 19.853 -94.354 14.530 1.00 81.71 C
ATOM 16 N7 G A 24 18.785 -93.958 13.901 1.00 82.11 N
ATOM 17 C5 G A 24 18.835 -92.577 13.977 1.00 81.30 C
ATOM 18 C6 G A 24 17.936 -91.646 13.457 1.00 81.32 C
ATOM 19 O6 G A 24 16.906 -91.886 12.820 1.00 82.07 O
ATOM 20 N1 G A 24 18.335 -90.359 13.735 1.00 80.37 N
ATOM 21 C2 G A 24 19.466 -90.038 14.432 1.00 79.52 C
ATOM 22 N2 G A 24 19.683 -88.734 14.602 1.00 78.68 N
ATOM 23 N3 G A 24 20.326 -90.899 14.936 1.00 79.47 N
ATOM 24 C4 G A 24 19.940 -92.155 14.664 1.00 80.40 C
ATOM 25 P C A 25 20.727 -94.780 20.081 1.00 78.81 P
ATOM 26 OP1 C A 25 21.298 -95.219 21.401 1.00 78.09 O
ATOM 27 OP2 C A 25 19.452 -95.353 19.628 1.00 79.67 O
ATOM 28 O5' C A 25 20.650 -93.207 20.036 1.00 78.00 O
TER
ATOM 1 O3' U B 2 22.257 -87.838 15.623 1.00 76.47 O
ATOM 2 P U B 3 22.300 -86.794 16.800 1.00 76.34 P
ATOM 3 OP1 U B 3 20.912 -86.393 17.091 1.00 76.20 O
ATOM 4 OP2 U B 3 23.267 -85.762 16.408 1.00 75.90 O
ATOM 5 O5' U B 3 22.882 -87.651 17.992 1.00 75.88 O
ATOM 6 C5' U B 3 22.271 -88.864 18.383 1.00 76.36 C
ATOM 7 C4' U B 3 23.170 -89.657 19.300 1.00 76.01 C
ATOM 8 O4' U B 3 24.344 -90.121 18.579 1.00 76.50 O
ATOM 9 C3' U B 3 23.753 -88.907 20.484 1.00 74.75 C
ATOM 10 O3' U B 3 22.824 -88.769 21.543 1.00 74.19 O
ATOM 11 C2' U B 3 24.963 -89.767 20.840 1.00 74.74 C
ATOM 12 O2' U B 3 24.561 -90.934 21.549 1.00 74.97 O
ATOM 13 C1' U B 3 25.436 -90.215 19.464 1.00 75.78 C
ATOM 14 N1 U B 3 26.546 -89.404 18.939 1.00 75.51 N
ATOM 15 C2 U B 3 27.838 -89.689 19.351 1.00 75.17 C
ATOM 16 O2 U B 3 28.087 -90.557 20.183 1.00 75.03 O
ATOM 17 N3 U B 3 28.805 -88.920 18.743 1.00 75.01 N
ATOM 18 C4 U B 3 28.592 -87.940 17.797 1.00 75.18 C
ATOM 19 O4 U B 3 29.518 -87.304 17.312 1.00 75.03 O
ATOM 20 C5 U B 3 27.240 -87.725 17.434 1.00 75.53 C
ATOM 21 C6 U B 3 26.284 -88.454 17.994 1.00 75.69 C
ATOM 22 P G B 4 22.822 -87.468 22.469 1.00 70.72 P
ATOM 23 OP1 G B 4 21.491 -87.376 23.089 1.00 70.54 O
ATOM 24 OP2 G B 4 23.316 -86.336 21.647 1.00 70.58 O
ATOM 25 O5' G B 4 23.872 -87.833 23.565 1.00 70.01 O
TER
ATOM 2 P G A 24 20.742 -98.509 15.151 1.00 83.47 P
ATOM 3 OP1 G A 24 21.077 -99.497 16.229 1.00 83.25 O
ATOM 4 OP2 G A 24 19.334 -98.420 14.647 1.00 84.03 O
ATOM 5 O5' G A 24 21.231 -97.079 15.578 1.00 82.27 O
ATOM 6 C5' G A 24 22.343 -96.912 16.420 1.00 81.40 C
ATOM 7 C4' G A 24 22.559 -95.460 16.693 1.00 80.36 C
ATOM 8 O4' G A 24 22.420 -94.703 15.462 1.00 80.79 O
ATOM 9 C3' G A 24 21.554 -94.821 17.610 1.00 79.59 C
ATOM 10 O3' G A 24 21.816 -95.106 18.959 1.00 78.81 O
ATOM 11 C2' G A 24 21.698 -93.351 17.252 1.00 79.00 C
ATOM 12 O2' G A 24 22.904 -92.827 17.790 1.00 78.13 O
ATOM 13 C1' G A 24 21.868 -93.439 15.747 1.00 80.01 C
ATOM 14 N9 G A 24 20.593 -93.313 15.026 1.00 80.66 N
ATOM 15 C8 G A 24 19.853 -94.354 14.530 1.00 81.71 C
ATOM 16 N7 G A 24 18.785 -93.958 13.901 1.00 82.11 N
ATOM 17 C5 G A 24 18.835 -92.577 13.977 1.00 81.30 C
ATOM 18 C6 G A 24 17.936 -91.646 13.457 1.00 81.32 C
ATOM 19 O6 G A 24 16.906 -91.886 12.820 1.00 82.07 O
ATOM 20 N1 G A 24 18.335 -90.359 13.735 1.00 80.37 N
ATOM 21 C2 G A 24 19.466 -90.038 14.432 1.00 79.52 C
ATOM 22 N2 G A 24 19.683 -88.734 14.602 1.00 78.68 N
ATOM 23 N3 G A 24 20.326 -90.899 14.936 1.00 79.47 N
ATOM 24 C4 G A 24 19.940 -92.155 14.664 1.00 80.40 C
ATOM 25 P C A 25 20.727 -94.780 20.081 1.00 78.81 P
ATOM 26 OP1 C A 25 21.298 -95.219 21.401 1.00 78.09 O
ATOM 27 OP2 C A 25 19.452 -95.353 19.628 1.00 79.67 O
ATOM 28 O5' C A 25 20.650 -93.207 20.036 1.00 78.00 O
TER
ATOM 1 O3' U B 2 22.257 -87.838 15.623 1.00 76.47 O
ATOM 2 P U B 3 22.300 -86.794 16.800 1.00 76.34 P
ATOM 3 OP1 U B 3 20.912 -86.393 17.091 1.00 76.20 O
ATOM 4 OP2 U B 3 23.267 -85.762 16.408 1.00 75.90 O
ATOM 5 O5' U B 3 22.882 -87.651 17.992 1.00 75.88 O
ATOM 6 C5' U B 3 22.271 -88.864 18.383 1.00 76.36 C
ATOM 7 C4' U B 3 23.170 -89.657 19.300 1.00 76.01 C
ATOM 8 O4' U B 3 24.344 -90.121 18.579 1.00 76.50 O
ATOM 9 C3' U B 3 23.753 -88.907 20.484 1.00 74.75 C
ATOM 10 O3' U B 3 22.824 -88.769 21.543 1.00 74.19 O
ATOM 11 C2' U B 3 24.963 -89.767 20.840 1.00 74.74 C
ATOM 12 O2' U B 3 24.561 -90.934 21.549 1.00 74.97 O
ATOM 13 C1' U B 3 25.436 -90.215 19.464 1.00 75.78 C
ATOM 14 N1 U B 3 26.546 -89.404 18.939 1.00 75.51 N
ATOM 15 C2 U B 3 27.838 -89.689 19.351 1.00 75.17 C
ATOM 16 O2 U B 3 28.087 -90.557 20.183 1.00 75.03 O
ATOM 17 N3 U B 3 28.805 -88.920 18.743 1.00 75.01 N
ATOM 18 C4 U B 3 28.592 -87.940 17.797 1.00 75.18 C
ATOM 19 O4 U B 3 29.518 -87.304 17.312 1.00 75.03 O
ATOM 20 C5 U B 3 27.240 -87.725 17.434 1.00 75.53 C
ATOM 21 C6 U B 3 26.284 -88.454 17.994 1.00 75.69 C
ATOM 22 P G B 4 22.822 -87.468 22.469 1.00 70.72 P
ATOM 23 OP1 G B 4 21.491 -87.376 23.089 1.00 70.54 O
ATOM 24 OP2 G B 4 23.316 -86.336 21.647 1.00 70.58 O
ATOM 25 O5' G B 4 23.872 -87.833 23.565 1.00 70.01 O
TER
Atoms:
OP1: (21.077,-99.497,16.229)
OP2: (19.334,-98.420,14.647)
C3': (21.554,-94.821,17.610)
C1': (21.868,-93.439,15.747)
C5': (22.343,-96.912,16.420)
O6: (16.906,-91.886,12.820)
O4': (22.420,-94.703,15.462)
C8: (19.853,-94.354,14.530)
C2: (19.466,-90.038,14.432)
C6: (17.936,-91.646,13.457)
C5: (18.835,-92.577,13.977)
C4: (19.940,-92.155,14.664)
P: (20.742,-98.509,15.151)
C4': (22.559,-95.460,16.693)
C2': (21.698,-93.351,17.252)
O2': (22.904,-92.827,17.790)
N1: (18.335,-90.359,13.735)
N2: (19.683,-88.734,14.602)
N3: (20.326,-90.899,14.936)
N7: (18.785,-93.958,13.901)
N9: (20.593,-93.313,15.026)
O5': (21.231,-97.079,15.578)
O3': (21.816,-95.106,18.959)
OP2: (19.334,-98.420,14.647)
C3': (21.554,-94.821,17.610)
C1': (21.868,-93.439,15.747)
C5': (22.343,-96.912,16.420)
O6: (16.906,-91.886,12.820)
O4': (22.420,-94.703,15.462)
C8: (19.853,-94.354,14.530)
C2: (19.466,-90.038,14.432)
C6: (17.936,-91.646,13.457)
C5: (18.835,-92.577,13.977)
C4: (19.940,-92.155,14.664)
P: (20.742,-98.509,15.151)
C4': (22.559,-95.460,16.693)
C2': (21.698,-93.351,17.252)
O2': (22.904,-92.827,17.790)
N1: (18.335,-90.359,13.735)
N2: (19.683,-88.734,14.602)
N3: (20.326,-90.899,14.936)
N7: (18.785,-93.958,13.901)
N9: (20.593,-93.313,15.026)
O5': (21.231,-97.079,15.578)
O3': (21.816,-95.106,18.959)
C4: (28.592,-87.940,17.797)
N3: (28.805,-88.920,18.743)
OP1: (20.912,-86.393,17.091)
OP2: (23.267,-85.762,16.408)
C2: (27.838,-89.689,19.351)
C1': (25.436,-90.215,19.464)
C3': (23.753,-88.907,20.484)
O5': (22.882,-87.651,17.992)
O4': (24.344,-90.121,18.579)
C5': (22.271,-88.864,18.383)
P: (22.300,-86.794,16.800)
C4': (23.170,-89.657,19.300)
C2': (24.963,-89.767,20.840)
O2': (24.561,-90.934,21.549)
N1: (26.546,-89.404,18.939)
O4: (29.518,-87.304,17.312)
O2: (28.087,-90.557,20.183)
C6: (26.284,-88.454,17.994)
C5: (27.240,-87.725,17.434)
O3': (22.824,-88.769,21.543)
N3: (28.805,-88.920,18.743)
OP1: (20.912,-86.393,17.091)
OP2: (23.267,-85.762,16.408)
C2: (27.838,-89.689,19.351)
C1': (25.436,-90.215,19.464)
C3': (23.753,-88.907,20.484)
O5': (22.882,-87.651,17.992)
O4': (24.344,-90.121,18.579)
C5': (22.271,-88.864,18.383)
P: (22.300,-86.794,16.800)
C4': (23.170,-89.657,19.300)
C2': (24.963,-89.767,20.840)
O2': (24.561,-90.934,21.549)
N1: (26.546,-89.404,18.939)
O4: (29.518,-87.304,17.312)
O2: (28.087,-90.557,20.183)
C6: (26.284,-88.454,17.994)
C5: (27.240,-87.725,17.434)
O3': (22.824,-88.769,21.543)
Image (generated by PyMOL):