ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A319:A312

Extra

PDB:
ATOM 1 O3' C A 318 128.880 56.797 -9.142 1.00 53.12 O
ATOM 2 P A A 319 129.048 55.581 -8.089 1.00 52.21 P
ATOM 3 OP1 A A 319 130.351 55.800 -7.421 1.00 46.83 O
ATOM 4 OP2 A A 319 128.789 54.297 -8.744 1.00 46.83 O
ATOM 5 O5' A A 319 127.896 55.796 -7.002 1.00 52.21 O
ATOM 6 C5' A A 319 127.859 56.965 -6.144 1.00 52.21 C
ATOM 7 C4' A A 319 127.282 56.601 -4.792 1.00 52.21 C
ATOM 8 O4' A A 319 126.003 55.969 -4.979 1.00 52.21 O
ATOM 9 C3' A A 319 128.127 55.578 -4.052 1.00 52.21 C
ATOM 10 O3' A A 319 129.034 56.184 -3.113 1.00 52.21 O
ATOM 11 C2' A A 319 127.125 54.709 -3.282 1.00 52.21 C
ATOM 12 O2' A A 319 127.032 54.952 -1.894 1.00 52.21 O
ATOM 13 C1' A A 319 125.790 55.046 -3.936 1.00 52.21 C
ATOM 14 N9 A A 319 125.059 53.894 -4.443 1.00 46.83 N
ATOM 15 C8 A A 319 124.768 53.569 -5.739 1.00 46.83 C
ATOM 16 N7 A A 319 124.042 52.490 -5.863 1.00 46.83 N
ATOM 17 C5 A A 319 123.852 52.072 -4.560 1.00 46.83 C
ATOM 18 C6 A A 319 123.165 50.994 -4.020 1.00 46.83 C
ATOM 19 N6 A A 319 122.508 50.098 -4.759 1.00 46.83 N
ATOM 20 N1 A A 319 123.170 50.859 -2.679 1.00 46.83 N
ATOM 21 C2 A A 319 123.829 51.755 -1.947 1.00 46.83 C
ATOM 22 N3 A A 319 124.513 52.812 -2.340 1.00 46.83 N
ATOM 23 C4 A A 319 124.484 52.918 -3.676 1.00 46.83 C
ATOM 24 P C A 320 128.939 57.763 -2.749 1.00 60.79 P
ATOM 25 OP1 C A 320 127.570 58.063 -2.251 1.00 66.18 O
ATOM 26 OP2 C A 320 129.544 58.600 -3.819 1.00 66.18 O
ATOM 27 O5' C A 320 129.895 57.883 -1.495 1.00 60.79 O
TER

ATOM 1 O3' A B 311 122.607 48.598 -15.325 1.00 57.10 O
ATOM 2 P C B 312 121.157 49.020 -14.770 1.00 50.24 P
ATOM 3 OP1 C B 312 120.146 48.534 -15.746 1.00 55.68 O
ATOM 4 OP2 C B 312 121.159 50.440 -14.375 1.00 55.68 O
ATOM 5 O5' C B 312 121.019 48.191 -13.420 1.00 50.24 O
ATOM 6 C5' C B 312 121.122 46.756 -13.413 1.00 50.24 C
ATOM 7 C4' C B 312 120.998 46.239 -12.001 1.00 50.24 C
ATOM 8 O4' C B 312 122.163 46.618 -11.229 1.00 50.24 O
ATOM 9 C3' C B 312 119.832 46.817 -11.229 1.00 50.24 C
ATOM 10 O3' C B 312 118.653 46.106 -11.482 1.00 50.24 O
ATOM 11 C2' C B 312 120.264 46.686 -9.784 1.00 50.24 C
ATOM 12 O2' C B 312 119.975 45.403 -9.275 1.00 50.24 O
ATOM 13 C1' C B 312 121.778 46.895 -9.892 1.00 50.24 C
ATOM 14 N1 C B 312 122.201 48.265 -9.552 1.00 55.68 N
ATOM 15 C2 C B 312 122.286 48.641 -8.194 1.00 55.68 C
ATOM 16 O2 C B 312 122.030 47.795 -7.303 1.00 55.68 O
ATOM 17 N3 C B 312 122.643 49.914 -7.888 1.00 55.68 N
ATOM 18 C4 C B 312 122.913 50.785 -8.864 1.00 55.68 C
ATOM 19 N4 C B 312 123.237 52.032 -8.521 1.00 55.68 N
ATOM 20 C5 C B 312 122.856 50.420 -10.238 1.00 55.68 C
ATOM 21 C6 C B 312 122.498 49.166 -10.534 1.00 55.68 C
ATOM 22 P U B 313 117.269 46.898 -11.528 1.00 47.29 P
ATOM 23 OP1 U B 313 116.242 45.960 -12.064 1.00 53.50 O
ATOM 24 OP2 U B 313 117.507 48.197 -12.212 1.00 53.50 O
ATOM 25 O5' U B 313 116.989 47.208 -9.993 1.00 47.29 O
TER

Atoms:
OP1: (130.351,55.800,-7.421)
OP2: (128.789,54.297,-8.744)
C3': (128.127,55.578,-4.052)
C1': (125.790,55.046,-3.936)
C5': (127.859,56.965,-6.144)
O4': (126.003,55.969,-4.979)
C8: (124.768,53.569,-5.739)
O2': (127.032,54.952,-1.894)
C6: (123.165,50.994,-4.020)
C5: (123.852,52.072,-4.560)
C4: (124.484,52.918,-3.676)
P: (129.048,55.581,-8.089)
C4': (127.282,56.601,-4.792)
C2': (127.125,54.709,-3.282)
C2: (123.829,51.755,-1.947)
N1: (123.170,50.859,-2.679)
N3: (124.513,52.812,-2.340)
N6: (122.508,50.098,-4.759)
N7: (124.042,52.490,-5.863)
N9: (125.059,53.894,-4.443)
O5': (127.896,55.796,-7.002)
O3': (129.034,56.184,-3.113)
C2: (122.286,48.641,-8.194)
OP1: (120.146,48.534,-15.746)
OP2: (121.159,50.440,-14.375)
C4: (122.913,50.785,-8.864)
O5': (121.019,48.191,-13.420)
C3': (119.832,46.817,-11.229)
C1': (121.778,46.895,-9.892)
O4': (122.163,46.618,-11.229)
C5': (121.122,46.756,-13.413)
P: (121.157,49.020,-14.770)
O2: (122.030,47.795,-7.303)
C4': (120.998,46.239,-12.001)
C2': (120.264,46.686,-9.784)
O2': (119.975,45.403,-9.275)
N1: (122.201,48.265,-9.552)
N3: (122.643,49.914,-7.888)
N4: (123.237,52.032,-8.521)
C6: (122.498,49.166,-10.534)
C5: (122.856,50.420,-10.238)
O3': (118.653,46.106,-11.482)
Image (generated by PyMOL):
PyMOL image
show in jmol