ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1EXD:B12:B18

Extra

PDB:
ATOM 1 O3' A A 11 23.791 26.723 21.594 1.00 42.39 O
ATOM 2 P A A 12 23.088 28.152 21.523 1.00 44.10 P
ATOM 3 OP1 A A 12 23.640 28.859 20.333 1.00 46.99 O
ATOM 4 OP2 A A 12 23.206 28.765 22.874 1.00 39.96 O
ATOM 5 O5' A A 12 21.565 27.800 21.237 1.00 45.96 O
ATOM 6 C5' A A 12 20.516 28.720 21.567 1.00 51.97 C
ATOM 7 C4' A A 12 19.196 28.187 21.079 1.00 51.92 C
ATOM 8 O4' A A 12 18.932 26.916 21.717 1.00 55.63 O
ATOM 9 C3' A A 12 17.989 29.041 21.403 1.00 52.15 C
ATOM 10 O3' A A 12 17.814 30.000 20.378 1.00 59.01 O
ATOM 11 C2' A A 12 16.876 28.013 21.374 1.00 55.00 C
ATOM 12 O2' A A 12 16.553 27.646 20.050 1.00 59.75 O
ATOM 13 C1' A A 12 17.560 26.827 22.050 1.00 56.10 C
ATOM 14 N9 A A 12 17.448 26.845 23.507 1.00 53.75 N
ATOM 15 C8 A A 12 18.452 27.062 24.415 1.00 50.64 C
ATOM 16 N7 A A 12 18.060 27.000 25.663 1.00 54.24 N
ATOM 17 C5 A A 12 16.702 26.727 25.575 1.00 56.95 C
ATOM 18 C6 A A 12 15.708 26.542 26.554 1.00 56.14 C
ATOM 19 N6 A A 12 15.947 26.587 27.866 1.00 53.81 N
ATOM 20 N1 A A 12 14.447 26.299 26.132 1.00 53.40 N
ATOM 21 C2 A A 12 14.212 26.243 24.815 1.00 50.04 C
ATOM 22 N3 A A 12 15.059 26.392 23.800 1.00 55.58 N
ATOM 23 C4 A A 12 16.308 26.637 24.252 1.00 56.41 C
ATOM 24 P G A 13 17.431 31.505 20.758 1.00 67.96 P
ATOM 25 OP1 G A 13 17.694 32.353 19.559 1.00 68.81 O
ATOM 26 OP2 G A 13 18.068 31.847 22.054 1.00 67.08 O
ATOM 27 O5' G A 13 15.865 31.427 21.018 1.00 78.21 O
TER

ATOM 1 O3' U B 17 7.054 27.539 29.993 1.00 8.00 O
ATOM 2 P A B 18 6.490 26.054 30.168 1.00 15.00 P
ATOM 3 OP1 A B 18 6.104 25.555 28.816 1.00 8.00 O
ATOM 4 OP2 A B 18 5.495 26.059 31.269 1.00 8.00 O
ATOM 5 O5' A B 18 7.772 25.265 30.687 1.00 8.00 O
ATOM 6 C5' A B 18 8.406 24.251 29.888 1.00 99.07 C
ATOM 7 C4' A B 18 9.651 24.796 29.215 1.00 87.21 C
ATOM 8 O4' A B 18 10.346 25.741 30.058 1.00 82.72 O
ATOM 9 C3' A B 18 10.673 23.728 28.883 1.00 82.86 C
ATOM 10 O3' A B 18 10.349 23.213 27.606 1.00 88.62 O
ATOM 11 C2' A B 18 11.996 24.486 28.858 1.00 77.67 C
ATOM 12 O2' A B 18 12.288 25.008 27.580 1.00 75.30 O
ATOM 13 C1' A B 18 11.738 25.629 29.846 1.00 75.39 C
ATOM 14 N9 A B 18 12.387 25.512 31.149 1.00 70.12 N
ATOM 15 C8 A B 18 11.794 25.221 32.351 1.00 72.26 C
ATOM 16 N7 A B 18 12.621 25.234 33.367 1.00 70.00 N
ATOM 17 C5 A B 18 13.842 25.539 32.794 1.00 66.17 C
ATOM 18 C6 A B 18 15.115 25.704 33.339 1.00 62.77 C
ATOM 19 N6 A B 18 15.385 25.579 34.636 1.00 60.22 N
ATOM 20 N1 A B 18 16.119 26.009 32.498 1.00 64.59 N
ATOM 21 C2 A B 18 15.849 26.137 31.197 1.00 67.53 C
ATOM 22 N3 A B 18 14.691 26.008 30.562 1.00 68.07 N
ATOM 23 C4 A B 18 13.714 25.706 31.428 1.00 67.94 C
ATOM 24 P A B 19 10.905 21.782 27.155 1.00 93.66 P
ATOM 25 OP1 A B 19 9.754 20.904 26.798 1.00 95.17 O
ATOM 26 OP2 A B 19 11.913 21.316 28.152 1.00 92.96 O
ATOM 27 O5' A B 19 11.666 22.126 25.812 1.00 82.95 O
TER

Atoms:
OP1: (23.640,28.859,20.333)
OP2: (23.206,28.765,22.874)
C3': (17.989,29.041,21.403)
C1': (17.560,26.827,22.050)
C5': (20.516,28.720,21.567)
O4': (18.932,26.916,21.717)
C8: (18.452,27.062,24.415)
O2': (16.553,27.646,20.050)
C6: (15.708,26.542,26.554)
C5: (16.702,26.727,25.575)
C4: (16.308,26.637,24.252)
P: (23.088,28.152,21.523)
C4': (19.196,28.187,21.079)
C2': (16.876,28.013,21.374)
C2: (14.212,26.243,24.815)
N1: (14.447,26.299,26.132)
N3: (15.059,26.392,23.800)
N6: (15.947,26.587,27.866)
N7: (18.060,27.000,25.663)
N9: (17.448,26.845,23.507)
O5': (21.565,27.800,21.237)
O3': (17.814,30.000,20.378)
OP1: (6.104,25.555,28.816)
OP2: (5.495,26.059,31.269)
C3': (10.673,23.728,28.883)
C1': (11.738,25.629,29.846)
C5': (8.406,24.251,29.888)
O4': (10.346,25.741,30.058)
C8: (11.794,25.221,32.351)
O2': (12.288,25.008,27.580)
C6: (15.115,25.704,33.339)
C5: (13.842,25.539,32.794)
C4: (13.714,25.706,31.428)
P: (6.490,26.054,30.168)
C4': (9.651,24.796,29.215)
C2': (11.996,24.486,28.858)
C2: (15.849,26.137,31.197)
N1: (16.119,26.009,32.498)
N3: (14.691,26.008,30.562)
N6: (15.385,25.579,34.636)
N7: (12.621,25.234,33.367)
N9: (12.387,25.512,31.149)
O5': (7.772,25.265,30.687)
O3': (10.349,23.213,27.606)
Image (generated by PyMOL):
PyMOL image
show in jmol