Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A310:A303
Extra
PDB:
ATOM 1 O3' C A 309 46.791 -6.778 63.243 1.00 68.03 O
ATOM 2 P A A 310 48.341 -6.443 63.505 1.00 70.85 P
ATOM 3 OP1 A A 310 48.706 -5.344 62.578 1.00 67.33 O
ATOM 4 OP2 A A 310 49.115 -7.708 63.489 1.00 73.91 O
ATOM 5 O5' A A 310 48.382 -5.906 65.004 1.00 74.80 O
ATOM 6 C5' A A 310 48.574 -4.522 65.271 1.00 75.03 C
ATOM 7 C4' A A 310 49.129 -4.303 66.667 1.00 78.86 C
ATOM 8 O4' A A 310 48.110 -4.552 67.667 1.00 79.86 O
ATOM 9 C3' A A 310 50.366 -5.088 67.090 1.00 78.43 C
ATOM 10 O3' A A 310 51.209 -4.211 67.851 1.00 78.65 O
ATOM 11 C2' A A 310 49.782 -6.180 67.998 1.00 78.16 C
ATOM 12 O2' A A 310 50.683 -6.582 69.007 1.00 79.01 O
ATOM 13 C1' A A 310 48.588 -5.464 68.630 1.00 78.60 C
ATOM 14 N9 A A 310 47.461 -6.317 69.005 1.00 78.43 N
ATOM 15 C8 A A 310 46.317 -6.497 68.269 1.00 78.43 C
ATOM 16 N7 A A 310 45.413 -7.226 68.864 1.00 79.57 N
ATOM 17 C5 A A 310 46.000 -7.569 70.067 1.00 76.82 C
ATOM 18 C6 A A 310 45.542 -8.321 71.149 1.00 74.94 C
ATOM 19 N6 A A 310 44.318 -8.860 71.207 1.00 71.03 N
ATOM 20 N1 A A 310 46.381 -8.497 72.191 1.00 79.78 N
ATOM 21 C2 A A 310 47.595 -7.936 72.137 1.00 79.75 C
ATOM 22 N3 A A 310 48.138 -7.193 71.178 1.00 78.10 N
ATOM 23 C4 A A 310 47.277 -7.042 70.158 1.00 77.53 C
ATOM 24 P C A 311 52.002 -3.004 67.112 1.00 83.72 P
ATOM 25 OP1 C A 311 51.719 -1.721 67.830 1.00 75.53 O
ATOM 26 OP2 C A 311 51.753 -3.105 65.647 1.00 76.39 O
ATOM 27 O5' C A 311 53.527 -3.373 67.363 1.00 82.21 O
TER
ATOM 1 O3' A B 302 37.727 -11.872 62.969 1.00 68.90 O
ATOM 2 P C B 303 37.064 -11.067 64.177 1.00 64.54 P
ATOM 3 OP1 C B 303 35.624 -11.407 64.060 1.00 74.68 O
ATOM 4 OP2 C B 303 37.499 -9.650 64.129 1.00 56.63 O
ATOM 5 O5' C B 303 37.676 -11.712 65.498 1.00 56.73 O
ATOM 6 C5' C B 303 37.184 -12.946 65.992 1.00 63.24 C
ATOM 7 C4' C B 303 37.799 -13.257 67.335 1.00 69.64 C
ATOM 8 O4' C B 303 39.236 -13.367 67.193 1.00 64.85 O
ATOM 9 C3' C B 303 37.624 -12.234 68.446 1.00 72.49 C
ATOM 10 O3' C B 303 36.385 -12.363 69.116 1.00 72.56 O
ATOM 11 C2' C B 303 38.763 -12.575 69.390 1.00 72.93 C
ATOM 12 O2' C B 303 38.446 -13.646 70.246 1.00 74.67 O
ATOM 13 C1' C B 303 39.854 -13.009 68.416 1.00 66.94 C
ATOM 14 N1 C B 303 40.801 -11.915 68.172 1.00 69.48 N
ATOM 15 C2 C B 303 41.808 -11.683 69.121 1.00 74.83 C
ATOM 16 O2 C B 303 41.879 -12.421 70.133 1.00 74.14 O
ATOM 17 N3 C B 303 42.673 -10.662 68.919 1.00 77.53 N
ATOM 18 C4 C B 303 42.563 -9.896 67.831 1.00 74.78 C
ATOM 19 N4 C B 303 43.438 -8.902 67.678 1.00 75.05 N
ATOM 20 C5 C B 303 41.551 -10.117 66.852 1.00 69.77 C
ATOM 21 C6 C B 303 40.702 -11.128 67.058 1.00 68.09 C
ATOM 22 P U B 304 35.651 -11.047 69.651 1.00 76.75 P
ATOM 23 OP1 U B 304 34.182 -11.289 69.648 1.00 79.36 O
ATOM 24 OP2 U B 304 36.212 -9.904 68.897 1.00 76.02 O
ATOM 25 O5' U B 304 36.185 -10.831 71.132 1.00 77.54 O
TER
ATOM 2 P A A 310 48.341 -6.443 63.505 1.00 70.85 P
ATOM 3 OP1 A A 310 48.706 -5.344 62.578 1.00 67.33 O
ATOM 4 OP2 A A 310 49.115 -7.708 63.489 1.00 73.91 O
ATOM 5 O5' A A 310 48.382 -5.906 65.004 1.00 74.80 O
ATOM 6 C5' A A 310 48.574 -4.522 65.271 1.00 75.03 C
ATOM 7 C4' A A 310 49.129 -4.303 66.667 1.00 78.86 C
ATOM 8 O4' A A 310 48.110 -4.552 67.667 1.00 79.86 O
ATOM 9 C3' A A 310 50.366 -5.088 67.090 1.00 78.43 C
ATOM 10 O3' A A 310 51.209 -4.211 67.851 1.00 78.65 O
ATOM 11 C2' A A 310 49.782 -6.180 67.998 1.00 78.16 C
ATOM 12 O2' A A 310 50.683 -6.582 69.007 1.00 79.01 O
ATOM 13 C1' A A 310 48.588 -5.464 68.630 1.00 78.60 C
ATOM 14 N9 A A 310 47.461 -6.317 69.005 1.00 78.43 N
ATOM 15 C8 A A 310 46.317 -6.497 68.269 1.00 78.43 C
ATOM 16 N7 A A 310 45.413 -7.226 68.864 1.00 79.57 N
ATOM 17 C5 A A 310 46.000 -7.569 70.067 1.00 76.82 C
ATOM 18 C6 A A 310 45.542 -8.321 71.149 1.00 74.94 C
ATOM 19 N6 A A 310 44.318 -8.860 71.207 1.00 71.03 N
ATOM 20 N1 A A 310 46.381 -8.497 72.191 1.00 79.78 N
ATOM 21 C2 A A 310 47.595 -7.936 72.137 1.00 79.75 C
ATOM 22 N3 A A 310 48.138 -7.193 71.178 1.00 78.10 N
ATOM 23 C4 A A 310 47.277 -7.042 70.158 1.00 77.53 C
ATOM 24 P C A 311 52.002 -3.004 67.112 1.00 83.72 P
ATOM 25 OP1 C A 311 51.719 -1.721 67.830 1.00 75.53 O
ATOM 26 OP2 C A 311 51.753 -3.105 65.647 1.00 76.39 O
ATOM 27 O5' C A 311 53.527 -3.373 67.363 1.00 82.21 O
TER
ATOM 1 O3' A B 302 37.727 -11.872 62.969 1.00 68.90 O
ATOM 2 P C B 303 37.064 -11.067 64.177 1.00 64.54 P
ATOM 3 OP1 C B 303 35.624 -11.407 64.060 1.00 74.68 O
ATOM 4 OP2 C B 303 37.499 -9.650 64.129 1.00 56.63 O
ATOM 5 O5' C B 303 37.676 -11.712 65.498 1.00 56.73 O
ATOM 6 C5' C B 303 37.184 -12.946 65.992 1.00 63.24 C
ATOM 7 C4' C B 303 37.799 -13.257 67.335 1.00 69.64 C
ATOM 8 O4' C B 303 39.236 -13.367 67.193 1.00 64.85 O
ATOM 9 C3' C B 303 37.624 -12.234 68.446 1.00 72.49 C
ATOM 10 O3' C B 303 36.385 -12.363 69.116 1.00 72.56 O
ATOM 11 C2' C B 303 38.763 -12.575 69.390 1.00 72.93 C
ATOM 12 O2' C B 303 38.446 -13.646 70.246 1.00 74.67 O
ATOM 13 C1' C B 303 39.854 -13.009 68.416 1.00 66.94 C
ATOM 14 N1 C B 303 40.801 -11.915 68.172 1.00 69.48 N
ATOM 15 C2 C B 303 41.808 -11.683 69.121 1.00 74.83 C
ATOM 16 O2 C B 303 41.879 -12.421 70.133 1.00 74.14 O
ATOM 17 N3 C B 303 42.673 -10.662 68.919 1.00 77.53 N
ATOM 18 C4 C B 303 42.563 -9.896 67.831 1.00 74.78 C
ATOM 19 N4 C B 303 43.438 -8.902 67.678 1.00 75.05 N
ATOM 20 C5 C B 303 41.551 -10.117 66.852 1.00 69.77 C
ATOM 21 C6 C B 303 40.702 -11.128 67.058 1.00 68.09 C
ATOM 22 P U B 304 35.651 -11.047 69.651 1.00 76.75 P
ATOM 23 OP1 U B 304 34.182 -11.289 69.648 1.00 79.36 O
ATOM 24 OP2 U B 304 36.212 -9.904 68.897 1.00 76.02 O
ATOM 25 O5' U B 304 36.185 -10.831 71.132 1.00 77.54 O
TER
Atoms:
OP1: (48.706,-5.344,62.578)
OP2: (49.115,-7.708,63.489)
C3': (50.366,-5.088,67.090)
C1': (48.588,-5.464,68.630)
C5': (48.574,-4.522,65.271)
O4': (48.110,-4.552,67.667)
C8: (46.317,-6.497,68.269)
O2': (50.683,-6.582,69.007)
C6: (45.542,-8.321,71.149)
C5: (46.000,-7.569,70.067)
C4: (47.277,-7.042,70.158)
P: (48.341,-6.443,63.505)
C4': (49.129,-4.303,66.667)
C2': (49.782,-6.180,67.998)
C2: (47.595,-7.936,72.137)
N1: (46.381,-8.497,72.191)
N3: (48.138,-7.193,71.178)
N6: (44.318,-8.860,71.207)
N7: (45.413,-7.226,68.864)
N9: (47.461,-6.317,69.005)
O5': (48.382,-5.906,65.004)
O3': (51.209,-4.211,67.851)
OP2: (49.115,-7.708,63.489)
C3': (50.366,-5.088,67.090)
C1': (48.588,-5.464,68.630)
C5': (48.574,-4.522,65.271)
O4': (48.110,-4.552,67.667)
C8: (46.317,-6.497,68.269)
O2': (50.683,-6.582,69.007)
C6: (45.542,-8.321,71.149)
C5: (46.000,-7.569,70.067)
C4: (47.277,-7.042,70.158)
P: (48.341,-6.443,63.505)
C4': (49.129,-4.303,66.667)
C2': (49.782,-6.180,67.998)
C2: (47.595,-7.936,72.137)
N1: (46.381,-8.497,72.191)
N3: (48.138,-7.193,71.178)
N6: (44.318,-8.860,71.207)
N7: (45.413,-7.226,68.864)
N9: (47.461,-6.317,69.005)
O5': (48.382,-5.906,65.004)
O3': (51.209,-4.211,67.851)
C2: (41.808,-11.683,69.121)
OP1: (35.624,-11.407,64.060)
OP2: (37.499,-9.650,64.129)
C4: (42.563,-9.896,67.831)
O5': (37.676,-11.712,65.498)
C3': (37.624,-12.234,68.446)
C1': (39.854,-13.009,68.416)
O4': (39.236,-13.367,67.193)
C5': (37.184,-12.946,65.992)
P: (37.064,-11.067,64.177)
O2: (41.879,-12.421,70.133)
C4': (37.799,-13.257,67.335)
C2': (38.763,-12.575,69.390)
O2': (38.446,-13.646,70.246)
N1: (40.801,-11.915,68.172)
N3: (42.673,-10.662,68.919)
N4: (43.438,-8.902,67.678)
C6: (40.702,-11.128,67.058)
C5: (41.551,-10.117,66.852)
O3': (36.385,-12.363,69.116)
OP1: (35.624,-11.407,64.060)
OP2: (37.499,-9.650,64.129)
C4: (42.563,-9.896,67.831)
O5': (37.676,-11.712,65.498)
C3': (37.624,-12.234,68.446)
C1': (39.854,-13.009,68.416)
O4': (39.236,-13.367,67.193)
C5': (37.184,-12.946,65.992)
P: (37.064,-11.067,64.177)
O2: (41.879,-12.421,70.133)
C4': (37.799,-13.257,67.335)
C2': (38.763,-12.575,69.390)
O2': (38.446,-13.646,70.246)
N1: (40.801,-11.915,68.172)
N3: (42.673,-10.662,68.919)
N4: (43.438,-8.902,67.678)
C6: (40.702,-11.128,67.058)
C5: (41.551,-10.117,66.852)
O3': (36.385,-12.363,69.116)
Image (generated by PyMOL):