Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2682:A2677
Extra
PDB:
ATOM 1 O3' G A2681 36.919 161.453 111.606 1.00 41.31 O
ATOM 2 P A A2682 36.565 162.194 112.975 1.00 42.83 P
ATOM 3 OP1 A A2682 35.092 162.320 113.032 1.00 43.27 O
ATOM 4 OP2 A A2682 37.427 163.403 113.045 1.00 43.35 O
ATOM 5 O5' A A2682 37.021 161.181 114.103 1.00 40.11 O
ATOM 6 C5' A A2682 36.235 160.041 114.433 1.00 39.30 C
ATOM 7 C4' A A2682 36.887 159.306 115.566 1.00 39.26 C
ATOM 8 O4' A A2682 38.302 159.157 115.263 1.00 39.99 O
ATOM 9 C3' A A2682 36.907 160.069 116.876 1.00 37.87 C
ATOM 10 O3' A A2682 35.678 159.942 117.558 1.00 40.01 O
ATOM 11 C2' A A2682 38.051 159.388 117.595 1.00 37.31 C
ATOM 12 O2' A A2682 37.661 158.085 117.951 1.00 34.35 O
ATOM 13 C1' A A2682 39.066 159.283 116.458 1.00 38.70 C
ATOM 14 N9 A A2682 39.894 160.487 116.352 1.00 38.87 N
ATOM 15 C8 A A2682 39.864 161.453 115.385 1.00 40.01 C
ATOM 16 N7 A A2682 40.710 162.427 115.588 1.00 42.26 N
ATOM 17 C5 A A2682 41.348 162.076 116.769 1.00 41.94 C
ATOM 18 C6 A A2682 42.356 162.707 117.530 1.00 41.96 C
ATOM 19 N6 A A2682 42.897 163.882 117.205 1.00 42.90 N
ATOM 20 N1 A A2682 42.779 162.085 118.649 1.00 40.40 N
ATOM 21 C2 A A2682 42.207 160.925 118.982 1.00 39.60 C
ATOM 22 N3 A A2682 41.243 160.246 118.357 1.00 40.53 N
ATOM 23 C4 A A2682 40.859 160.881 117.243 1.00 39.54 C
ATOM 24 P C A2683 35.162 161.138 118.496 1.00 39.75 P
ATOM 25 OP1 C A2683 33.981 160.661 119.260 1.00 39.28 O
ATOM 26 OP2 C A2683 35.058 162.356 117.669 1.00 39.20 O
ATOM 27 O5' C A2683 36.347 161.350 119.527 1.00 39.59 O
TER
ATOM 1 O3' U B2676 47.304 165.321 126.704 1.00 42.21 O
ATOM 2 P A B2677 48.142 164.301 125.798 1.00 40.62 P
ATOM 3 OP1 A B2677 48.197 163.067 126.595 1.00 41.90 O
ATOM 4 OP2 A B2677 49.399 164.892 125.292 1.00 40.12 O
ATOM 5 O5' A B2677 47.174 164.012 124.577 1.00 40.15 O
ATOM 6 C5' A B2677 46.105 163.075 124.724 1.00 40.77 C
ATOM 7 C4' A B2677 45.400 162.884 123.416 1.00 42.63 C
ATOM 8 O4' A B2677 44.843 164.152 122.978 1.00 43.12 O
ATOM 9 C3' A B2677 46.272 162.499 122.237 1.00 42.01 C
ATOM 10 O3' A B2677 46.631 161.128 122.265 1.00 40.93 O
ATOM 11 C2' A B2677 45.345 162.834 121.086 1.00 42.69 C
ATOM 12 O2' A B2677 44.287 161.897 121.058 1.00 44.32 O
ATOM 13 C1' A B2677 44.789 164.177 121.556 1.00 43.71 C
ATOM 14 N9 A B2677 45.595 165.301 121.075 1.00 44.96 N
ATOM 15 C8 A B2677 46.607 165.947 121.734 1.00 45.39 C
ATOM 16 N7 A B2677 47.138 166.937 121.054 1.00 45.98 N
ATOM 17 C5 A B2677 46.426 166.943 119.866 1.00 46.23 C
ATOM 18 C6 A B2677 46.505 167.754 118.730 1.00 47.10 C
ATOM 19 N6 A B2677 47.346 168.783 118.629 1.00 48.28 N
ATOM 20 N1 A B2677 45.675 167.476 117.695 1.00 46.78 N
ATOM 21 C2 A B2677 44.817 166.455 117.823 1.00 46.40 C
ATOM 22 N3 A B2677 44.635 165.631 118.855 1.00 46.24 N
ATOM 23 C4 A B2677 45.482 165.930 119.856 1.00 46.04 C
ATOM 24 P C B2678 47.965 160.652 121.521 1.00 39.82 P
ATOM 25 OP1 C B2678 48.124 159.198 121.717 1.00 38.10 O
ATOM 26 OP2 C B2678 49.059 161.556 121.921 1.00 40.40 O
ATOM 27 O5' C B2678 47.606 160.880 119.990 1.00 39.36 O
TER
ATOM 2 P A A2682 36.565 162.194 112.975 1.00 42.83 P
ATOM 3 OP1 A A2682 35.092 162.320 113.032 1.00 43.27 O
ATOM 4 OP2 A A2682 37.427 163.403 113.045 1.00 43.35 O
ATOM 5 O5' A A2682 37.021 161.181 114.103 1.00 40.11 O
ATOM 6 C5' A A2682 36.235 160.041 114.433 1.00 39.30 C
ATOM 7 C4' A A2682 36.887 159.306 115.566 1.00 39.26 C
ATOM 8 O4' A A2682 38.302 159.157 115.263 1.00 39.99 O
ATOM 9 C3' A A2682 36.907 160.069 116.876 1.00 37.87 C
ATOM 10 O3' A A2682 35.678 159.942 117.558 1.00 40.01 O
ATOM 11 C2' A A2682 38.051 159.388 117.595 1.00 37.31 C
ATOM 12 O2' A A2682 37.661 158.085 117.951 1.00 34.35 O
ATOM 13 C1' A A2682 39.066 159.283 116.458 1.00 38.70 C
ATOM 14 N9 A A2682 39.894 160.487 116.352 1.00 38.87 N
ATOM 15 C8 A A2682 39.864 161.453 115.385 1.00 40.01 C
ATOM 16 N7 A A2682 40.710 162.427 115.588 1.00 42.26 N
ATOM 17 C5 A A2682 41.348 162.076 116.769 1.00 41.94 C
ATOM 18 C6 A A2682 42.356 162.707 117.530 1.00 41.96 C
ATOM 19 N6 A A2682 42.897 163.882 117.205 1.00 42.90 N
ATOM 20 N1 A A2682 42.779 162.085 118.649 1.00 40.40 N
ATOM 21 C2 A A2682 42.207 160.925 118.982 1.00 39.60 C
ATOM 22 N3 A A2682 41.243 160.246 118.357 1.00 40.53 N
ATOM 23 C4 A A2682 40.859 160.881 117.243 1.00 39.54 C
ATOM 24 P C A2683 35.162 161.138 118.496 1.00 39.75 P
ATOM 25 OP1 C A2683 33.981 160.661 119.260 1.00 39.28 O
ATOM 26 OP2 C A2683 35.058 162.356 117.669 1.00 39.20 O
ATOM 27 O5' C A2683 36.347 161.350 119.527 1.00 39.59 O
TER
ATOM 1 O3' U B2676 47.304 165.321 126.704 1.00 42.21 O
ATOM 2 P A B2677 48.142 164.301 125.798 1.00 40.62 P
ATOM 3 OP1 A B2677 48.197 163.067 126.595 1.00 41.90 O
ATOM 4 OP2 A B2677 49.399 164.892 125.292 1.00 40.12 O
ATOM 5 O5' A B2677 47.174 164.012 124.577 1.00 40.15 O
ATOM 6 C5' A B2677 46.105 163.075 124.724 1.00 40.77 C
ATOM 7 C4' A B2677 45.400 162.884 123.416 1.00 42.63 C
ATOM 8 O4' A B2677 44.843 164.152 122.978 1.00 43.12 O
ATOM 9 C3' A B2677 46.272 162.499 122.237 1.00 42.01 C
ATOM 10 O3' A B2677 46.631 161.128 122.265 1.00 40.93 O
ATOM 11 C2' A B2677 45.345 162.834 121.086 1.00 42.69 C
ATOM 12 O2' A B2677 44.287 161.897 121.058 1.00 44.32 O
ATOM 13 C1' A B2677 44.789 164.177 121.556 1.00 43.71 C
ATOM 14 N9 A B2677 45.595 165.301 121.075 1.00 44.96 N
ATOM 15 C8 A B2677 46.607 165.947 121.734 1.00 45.39 C
ATOM 16 N7 A B2677 47.138 166.937 121.054 1.00 45.98 N
ATOM 17 C5 A B2677 46.426 166.943 119.866 1.00 46.23 C
ATOM 18 C6 A B2677 46.505 167.754 118.730 1.00 47.10 C
ATOM 19 N6 A B2677 47.346 168.783 118.629 1.00 48.28 N
ATOM 20 N1 A B2677 45.675 167.476 117.695 1.00 46.78 N
ATOM 21 C2 A B2677 44.817 166.455 117.823 1.00 46.40 C
ATOM 22 N3 A B2677 44.635 165.631 118.855 1.00 46.24 N
ATOM 23 C4 A B2677 45.482 165.930 119.856 1.00 46.04 C
ATOM 24 P C B2678 47.965 160.652 121.521 1.00 39.82 P
ATOM 25 OP1 C B2678 48.124 159.198 121.717 1.00 38.10 O
ATOM 26 OP2 C B2678 49.059 161.556 121.921 1.00 40.40 O
ATOM 27 O5' C B2678 47.606 160.880 119.990 1.00 39.36 O
TER
Atoms:
OP1: (35.092,162.320,113.032)
OP2: (37.427,163.403,113.045)
C3': (36.907,160.069,116.876)
C1': (39.066,159.283,116.458)
C5': (36.235,160.041,114.433)
O4': (38.302,159.157,115.263)
C8: (39.864,161.453,115.385)
O2': (37.661,158.085,117.951)
C6: (42.356,162.707,117.530)
C5: (41.348,162.076,116.769)
C4: (40.859,160.881,117.243)
P: (36.565,162.194,112.975)
C4': (36.887,159.306,115.566)
C2': (38.051,159.388,117.595)
C2: (42.207,160.925,118.982)
N1: (42.779,162.085,118.649)
N3: (41.243,160.246,118.357)
N6: (42.897,163.882,117.205)
N7: (40.710,162.427,115.588)
N9: (39.894,160.487,116.352)
O5': (37.021,161.181,114.103)
O3': (35.678,159.942,117.558)
OP2: (37.427,163.403,113.045)
C3': (36.907,160.069,116.876)
C1': (39.066,159.283,116.458)
C5': (36.235,160.041,114.433)
O4': (38.302,159.157,115.263)
C8: (39.864,161.453,115.385)
O2': (37.661,158.085,117.951)
C6: (42.356,162.707,117.530)
C5: (41.348,162.076,116.769)
C4: (40.859,160.881,117.243)
P: (36.565,162.194,112.975)
C4': (36.887,159.306,115.566)
C2': (38.051,159.388,117.595)
C2: (42.207,160.925,118.982)
N1: (42.779,162.085,118.649)
N3: (41.243,160.246,118.357)
N6: (42.897,163.882,117.205)
N7: (40.710,162.427,115.588)
N9: (39.894,160.487,116.352)
O5': (37.021,161.181,114.103)
O3': (35.678,159.942,117.558)
OP1: (48.197,163.067,126.595)
OP2: (49.399,164.892,125.292)
C3': (46.272,162.499,122.237)
C1': (44.789,164.177,121.556)
C5': (46.105,163.075,124.724)
O4': (44.843,164.152,122.978)
C8: (46.607,165.947,121.734)
O2': (44.287,161.897,121.058)
C6: (46.505,167.754,118.730)
C5: (46.426,166.943,119.866)
C4: (45.482,165.930,119.856)
P: (48.142,164.301,125.798)
C4': (45.400,162.884,123.416)
C2': (45.345,162.834,121.086)
C2: (44.817,166.455,117.823)
N1: (45.675,167.476,117.695)
N3: (44.635,165.631,118.855)
N6: (47.346,168.783,118.629)
N7: (47.138,166.937,121.054)
N9: (45.595,165.301,121.075)
O5': (47.174,164.012,124.577)
O3': (46.631,161.128,122.265)
OP2: (49.399,164.892,125.292)
C3': (46.272,162.499,122.237)
C1': (44.789,164.177,121.556)
C5': (46.105,163.075,124.724)
O4': (44.843,164.152,122.978)
C8: (46.607,165.947,121.734)
O2': (44.287,161.897,121.058)
C6: (46.505,167.754,118.730)
C5: (46.426,166.943,119.866)
C4: (45.482,165.930,119.856)
P: (48.142,164.301,125.798)
C4': (45.400,162.884,123.416)
C2': (45.345,162.834,121.086)
C2: (44.817,166.455,117.823)
N1: (45.675,167.476,117.695)
N3: (44.635,165.631,118.855)
N6: (47.346,168.783,118.629)
N7: (47.138,166.937,121.054)
N9: (45.595,165.301,121.075)
O5': (47.174,164.012,124.577)
O3': (46.631,161.128,122.265)
Image (generated by PyMOL):