ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A319:A312

Extra

PDB:
ATOM 1 O3' C A 318 5.925 51.173 118.743 1.00 14.18 O
ATOM 2 P A A 319 5.261 49.813 119.345 1.00 41.53 P
ATOM 3 OP1 A A 319 3.840 49.865 118.901 1.00 24.85 O
ATOM 4 OP2 A A 319 5.547 49.658 120.783 1.00 29.18 O
ATOM 5 O5' A A 319 5.943 48.602 118.566 1.00 42.35 O
ATOM 6 C5' A A 319 5.631 48.339 117.184 1.00 43.14 C
ATOM 7 C4' A A 319 5.193 46.902 116.994 1.00 42.39 C
ATOM 8 O4' A A 319 6.263 46.009 117.388 1.00 42.35 O
ATOM 9 C3' A A 319 3.935 46.430 117.725 1.00 42.14 C
ATOM 10 O3' A A 319 3.216 45.546 116.868 1.00 43.34 O
ATOM 11 C2' A A 319 4.485 45.606 118.883 1.00 42.33 C
ATOM 12 O2' A A 319 3.618 44.549 119.247 1.00 43.30 O
ATOM 13 C1' A A 319 5.760 45.031 118.272 1.00 41.72 C
ATOM 14 N9 A A 319 6.800 44.716 119.249 1.00 19.02 N
ATOM 15 C8 A A 319 7.981 45.378 119.477 1.00 18.59 C
ATOM 16 N7 A A 319 8.720 44.828 120.408 1.00 18.74 N
ATOM 17 C5 A A 319 7.972 43.742 120.826 1.00 19.37 C
ATOM 18 C6 A A 319 8.207 42.763 121.782 1.00 19.27 C
ATOM 19 N6 A A 319 9.307 42.714 122.536 1.00 19.09 N
ATOM 20 N1 A A 319 7.268 41.816 121.947 1.00 17.90 N
ATOM 21 C2 A A 319 6.169 41.866 121.192 1.00 18.00 C
ATOM 22 N3 A A 319 5.830 42.742 120.265 1.00 19.43 N
ATOM 23 C4 A A 319 6.788 43.664 120.126 1.00 18.59 C
ATOM 24 P C A 320 1.999 46.101 115.973 1.00 55.47 P
ATOM 25 OP1 C A 320 1.690 45.030 114.997 1.00 84.08 O
ATOM 26 OP2 C A 320 2.332 47.470 115.491 1.00 84.46 O
ATOM 27 O5' C A 320 0.780 46.204 116.987 1.00 12.16 O
TER

ATOM 1 O3' A B 311 16.142 50.585 124.696 1.00 24.01 O
ATOM 2 P C B 312 16.866 49.432 123.857 1.00 32.15 P
ATOM 3 OP1 C B 312 18.311 49.550 124.161 1.00 40.25 O
ATOM 4 OP2 C B 312 16.403 49.475 122.437 1.00 39.05 O
ATOM 5 O5' C B 312 16.281 48.110 124.521 1.00 10.72 O
ATOM 6 C5' C B 312 16.553 47.814 125.899 1.00 6.65 C
ATOM 7 C4' C B 312 15.831 46.560 126.326 1.00 5.12 C
ATOM 8 O4' C B 312 14.404 46.779 126.280 1.00 4.75 O
ATOM 9 C3' C B 312 16.054 45.340 125.463 1.00 4.23 C
ATOM 10 O3' C B 312 17.268 44.697 125.807 1.00 4.23 O
ATOM 11 C2' C B 312 14.805 44.509 125.733 1.00 4.53 C
ATOM 12 O2' C B 312 14.832 43.800 126.944 1.00 4.93 O
ATOM 13 C1' C B 312 13.747 45.589 125.908 1.00 5.63 C
ATOM 14 N1 C B 312 12.993 45.843 124.677 1.00 29.21 N
ATOM 15 C2 C B 312 11.888 45.047 124.397 1.00 28.93 C
ATOM 16 O2 C B 312 11.591 44.132 125.187 1.00 30.50 O
ATOM 17 N3 C B 312 11.171 45.285 123.276 1.00 28.18 N
ATOM 18 C4 C B 312 11.533 46.270 122.452 1.00 28.21 C
ATOM 19 N4 C B 312 10.795 46.482 121.355 1.00 27.47 N
ATOM 20 C5 C B 312 12.666 47.087 122.712 1.00 28.77 C
ATOM 21 C6 C B 312 13.360 46.841 123.823 1.00 28.29 C
ATOM 22 P U B 313 18.132 43.987 124.656 1.00 25.27 P
ATOM 23 OP1 U B 313 19.352 43.423 125.295 1.00 41.47 O
ATOM 24 OP2 U B 313 18.278 44.906 123.492 1.00 42.78 O
ATOM 25 O5' U B 313 17.187 42.776 124.226 1.00 17.76 O
TER

Atoms:
OP1: (3.840,49.865,118.901)
OP2: (5.547,49.658,120.783)
C3': (3.935,46.430,117.725)
C1': (5.760,45.031,118.272)
C5': (5.631,48.339,117.184)
O4': (6.263,46.009,117.388)
C8: (7.981,45.378,119.477)
O2': (3.618,44.549,119.247)
C6: (8.207,42.763,121.782)
C5: (7.972,43.742,120.826)
C4: (6.788,43.664,120.126)
P: (5.261,49.813,119.345)
C4': (5.193,46.902,116.994)
C2': (4.485,45.606,118.883)
C2: (6.169,41.866,121.192)
N1: (7.268,41.816,121.947)
N3: (5.830,42.742,120.265)
N6: (9.307,42.714,122.536)
N7: (8.720,44.828,120.408)
N9: (6.800,44.716,119.249)
O5': (5.943,48.602,118.566)
O3': (3.216,45.546,116.868)
C2: (11.888,45.047,124.397)
OP1: (18.311,49.550,124.161)
OP2: (16.403,49.475,122.437)
C4: (11.533,46.270,122.452)
O5': (16.281,48.110,124.521)
C3': (16.054,45.340,125.463)
C1': (13.747,45.589,125.908)
O4': (14.404,46.779,126.280)
C5': (16.553,47.814,125.899)
P: (16.866,49.432,123.857)
O2: (11.591,44.132,125.187)
C4': (15.831,46.560,126.326)
C2': (14.805,44.509,125.733)
O2': (14.832,43.800,126.944)
N1: (12.993,45.843,124.677)
N3: (11.171,45.285,123.276)
N4: (10.795,46.482,121.355)
C6: (13.360,46.841,123.823)
C5: (12.666,47.087,122.712)
O3': (17.268,44.697,125.807)
Image (generated by PyMOL):
PyMOL image
show in jmol