ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0B:B12:B18

Extra

PDB:
ATOM 1 O3' A A 11 23.360 26.273 21.742 1.00 40.87 O
ATOM 2 P A A 12 22.658 27.719 21.704 1.00 39.07 P
ATOM 3 OP1 A A 12 23.136 28.401 20.475 1.00 36.85 O
ATOM 4 OP2 A A 12 22.816 28.379 23.027 1.00 34.16 O
ATOM 5 O5' A A 12 21.118 27.389 21.505 1.00 41.66 O
ATOM 6 C5' A A 12 20.130 28.428 21.531 1.00 46.52 C
ATOM 7 C4' A A 12 18.800 27.874 21.090 1.00 48.60 C
ATOM 8 O4' A A 12 18.477 26.722 21.900 1.00 46.17 O
ATOM 9 C3' A A 12 17.634 28.830 21.251 1.00 52.14 C
ATOM 10 O3' A A 12 17.485 29.588 20.054 1.00 58.40 O
ATOM 11 C2' A A 12 16.454 27.886 21.437 1.00 50.54 C
ATOM 12 O2' A A 12 15.953 27.418 20.205 1.00 58.09 O
ATOM 13 C1' A A 12 17.097 26.720 22.192 1.00 51.04 C
ATOM 14 N9 A A 12 16.938 26.770 23.643 1.00 51.58 N
ATOM 15 C8 A A 12 17.911 26.989 24.583 1.00 49.66 C
ATOM 16 N7 A A 12 17.468 26.960 25.815 1.00 49.33 N
ATOM 17 C5 A A 12 16.112 26.707 25.682 1.00 51.05 C
ATOM 18 C6 A A 12 15.078 26.549 26.628 1.00 48.61 C
ATOM 19 N6 A A 12 15.257 26.619 27.948 1.00 47.95 N
ATOM 20 N1 A A 12 13.840 26.309 26.162 1.00 49.63 N
ATOM 21 C2 A A 12 13.658 26.226 24.834 1.00 51.86 C
ATOM 22 N3 A A 12 14.545 26.349 23.848 1.00 50.59 N
ATOM 23 C4 A A 12 15.769 26.592 24.346 1.00 53.06 C
ATOM 24 P G A 13 17.615 31.189 20.093 1.00 64.55 P
ATOM 25 OP1 G A 13 17.333 31.679 18.720 1.00 73.62 O
ATOM 26 OP2 G A 13 18.877 31.577 20.774 1.00 68.00 O
ATOM 27 O5' G A 13 16.423 31.651 21.027 1.00 69.22 O
TER

ATOM 1 O3' U B 17 5.529 29.056 31.534 1.00113.82 O
ATOM 2 P A B 18 5.606 27.566 30.946 1.00109.50 P
ATOM 3 OP1 A B 18 4.675 27.471 29.790 1.00114.18 O
ATOM 4 OP2 A B 18 5.475 26.612 32.076 1.00112.42 O
ATOM 5 O5' A B 18 7.096 27.469 30.402 1.00105.96 O
ATOM 6 C5' A B 18 7.617 26.231 29.893 1.00 98.54 C
ATOM 7 C4' A B 18 9.031 26.430 29.412 1.00 92.35 C
ATOM 8 O4' A B 18 9.841 26.946 30.488 1.00 88.89 O
ATOM 9 C3' A B 18 9.754 25.178 28.952 1.00 89.79 C
ATOM 10 O3' A B 18 9.457 24.996 27.567 1.00 85.49 O
ATOM 11 C2' A B 18 11.230 25.541 29.140 1.00 92.17 C
ATOM 12 O2' A B 18 11.783 26.167 27.998 1.00102.90 O
ATOM 13 C1' A B 18 11.181 26.571 30.275 1.00 84.92 C
ATOM 14 N9 A B 18 11.770 26.189 31.553 1.00 74.89 N
ATOM 15 C8 A B 18 11.127 25.764 32.685 1.00 77.02 C
ATOM 16 N7 A B 18 11.928 25.550 33.701 1.00 77.38 N
ATOM 17 C5 A B 18 13.187 25.841 33.199 1.00 74.19 C
ATOM 18 C6 A B 18 14.464 25.805 33.777 1.00 69.37 C
ATOM 19 N6 A B 18 14.695 25.434 35.037 1.00 66.96 N
ATOM 20 N1 A B 18 15.511 26.159 33.003 1.00 69.02 N
ATOM 21 C2 A B 18 15.280 26.508 31.730 1.00 69.34 C
ATOM 22 N3 A B 18 14.128 26.572 31.070 1.00 71.58 N
ATOM 23 C4 A B 18 13.106 26.226 31.872 1.00 74.70 C
ATOM 24 P A B 19 9.363 23.520 26.950 1.00 77.17 P
ATOM 25 OP1 A B 19 8.004 23.352 26.400 1.00 80.32 O
ATOM 26 OP2 A B 19 9.867 22.562 27.969 1.00 83.34 O
ATOM 27 O5' A B 19 10.379 23.553 25.726 1.00 74.71 O
TER

Atoms:
OP1: (23.136,28.401,20.475)
OP2: (22.816,28.379,23.027)
C3': (17.634,28.830,21.251)
C1': (17.097,26.720,22.192)
C5': (20.130,28.428,21.531)
O4': (18.477,26.722,21.900)
C8: (17.911,26.989,24.583)
O2': (15.953,27.418,20.205)
C6: (15.078,26.549,26.628)
C5: (16.112,26.707,25.682)
C4: (15.769,26.592,24.346)
P: (22.658,27.719,21.704)
C4': (18.800,27.874,21.090)
C2': (16.454,27.886,21.437)
C2: (13.658,26.226,24.834)
N1: (13.840,26.309,26.162)
N3: (14.545,26.349,23.848)
N6: (15.257,26.619,27.948)
N7: (17.468,26.960,25.815)
N9: (16.938,26.770,23.643)
O5': (21.118,27.389,21.505)
O3': (17.485,29.588,20.054)
OP1: (4.675,27.471,29.790)
OP2: (5.475,26.612,32.076)
C3': (9.754,25.178,28.952)
C1': (11.181,26.571,30.275)
C5': (7.617,26.231,29.893)
O4': (9.841,26.946,30.488)
C8: (11.127,25.764,32.685)
O2': (11.783,26.167,27.998)
C6: (14.464,25.805,33.777)
C5: (13.187,25.841,33.199)
C4: (13.106,26.226,31.872)
P: (5.606,27.566,30.946)
C4': (9.031,26.430,29.412)
C2': (11.230,25.541,29.140)
C2: (15.280,26.508,31.730)
N1: (15.511,26.159,33.003)
N3: (14.128,26.572,31.070)
N6: (14.695,25.434,35.037)
N7: (11.928,25.550,33.701)
N9: (11.770,26.189,31.553)
O5': (7.096,27.469,30.402)
O3': (9.457,24.996,27.567)
Image (generated by PyMOL):
PyMOL image
show in jmol