Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A237:A254
Extra
PDB:
ATOM 1 O3' A A 236 85.644 123.128 -8.508 1.00 72.56 O
ATOM 2 P G A 237 85.419 124.474 -7.645 1.00 73.25 P
ATOM 3 OP1 G A 237 83.977 124.815 -7.691 1.00 72.54 O
ATOM 4 OP2 G A 237 86.425 125.475 -8.103 1.00 72.60 O
ATOM 5 O5' G A 237 85.742 124.032 -6.150 1.00 72.46 O
ATOM 6 C5' G A 237 85.000 122.963 -5.525 1.00 71.73 C
ATOM 7 C4' G A 237 85.132 123.042 -4.018 1.00 71.45 C
ATOM 8 O4' G A 237 86.529 122.849 -3.639 1.00 71.44 O
ATOM 9 C3' G A 237 84.754 124.376 -3.387 1.00 70.75 C
ATOM 10 O3' G A 237 83.346 124.553 -3.211 1.00 69.12 O
ATOM 11 C2' G A 237 85.528 124.337 -2.077 1.00 71.19 C
ATOM 12 O2' G A 237 84.885 123.571 -1.077 1.00 70.61 O
ATOM 13 C1' G A 237 86.837 123.670 -2.521 1.00 71.56 C
ATOM 14 N9 G A 237 87.862 124.640 -2.920 1.00 72.36 N
ATOM 15 C8 G A 237 88.303 124.913 -4.194 1.00 72.66 C
ATOM 16 N7 G A 237 89.209 125.858 -4.234 1.00 73.21 N
ATOM 17 C5 G A 237 89.388 126.227 -2.905 1.00 73.39 C
ATOM 18 C6 G A 237 90.248 127.220 -2.311 1.00 73.44 C
ATOM 19 O6 G A 237 91.054 127.985 -2.860 1.00 72.97 O
ATOM 20 N1 G A 237 90.091 127.265 -0.930 1.00 73.51 N
ATOM 21 C2 G A 237 89.232 126.471 -0.210 1.00 74.05 C
ATOM 22 N2 G A 237 89.214 126.671 1.109 1.00 74.95 N
ATOM 23 N3 G A 237 88.443 125.552 -0.740 1.00 73.98 N
ATOM 24 C4 G A 237 88.568 125.484 -2.080 1.00 73.15 C
ATOM 25 P C A 238 82.741 126.039 -3.085 1.00 66.92 P
ATOM 26 OP1 C A 238 81.267 125.912 -3.073 1.00 67.16 O
ATOM 27 OP2 C A 238 83.396 126.937 -4.080 1.00 67.41 O
ATOM 28 O5' C A 238 83.158 126.480 -1.619 1.00 67.21 O
TER
ATOM 1 O3' U B 253 86.303 122.034 3.004 1.00 60.59 O
ATOM 2 P G B 254 85.240 120.811 3.057 1.00 60.11 P
ATOM 3 OP1 G B 254 83.927 121.394 3.467 1.00 57.87 O
ATOM 4 OP2 G B 254 85.795 119.638 3.797 1.00 57.03 O
ATOM 5 O5' G B 254 85.104 120.372 1.533 1.00 60.96 O
ATOM 6 C5' G B 254 84.513 121.270 0.572 1.00 62.40 C
ATOM 7 C4' G B 254 84.686 120.748 -0.842 1.00 62.91 C
ATOM 8 O4' G B 254 86.094 120.757 -1.217 1.00 62.53 O
ATOM 9 C3' G B 254 84.221 119.330 -1.145 1.00 62.84 C
ATOM 10 O3' G B 254 82.802 119.242 -1.324 1.00 64.29 O
ATOM 11 C2' G B 254 85.001 119.029 -2.422 1.00 62.38 C
ATOM 12 O2' G B 254 84.484 119.650 -3.580 1.00 63.37 O
ATOM 13 C1' G B 254 86.346 119.692 -2.118 1.00 61.96 C
ATOM 14 N9 G B 254 87.228 118.737 -1.465 1.00 60.43 N
ATOM 15 C8 G B 254 87.631 118.735 -0.157 1.00 59.72 C
ATOM 16 N7 G B 254 88.368 117.705 0.145 1.00 60.66 N
ATOM 17 C5 G B 254 88.472 116.993 -1.039 1.00 61.11 C
ATOM 18 C6 G B 254 89.149 115.770 -1.323 1.00 61.43 C
ATOM 19 O6 G B 254 89.799 115.054 -0.552 1.00 61.81 O
ATOM 20 N1 G B 254 89.005 115.400 -2.652 1.00 62.01 N
ATOM 21 C2 G B 254 88.296 116.109 -3.589 1.00 63.09 C
ATOM 22 N2 G B 254 88.265 115.589 -4.821 1.00 64.44 N
ATOM 23 N3 G B 254 87.657 117.248 -3.336 1.00 62.38 N
ATOM 24 C4 G B 254 87.788 117.625 -2.046 1.00 61.19 C
ATOM 25 P G B 255 82.023 117.858 -0.989 1.00 64.64 P
ATOM 26 OP1 G B 255 80.564 118.113 -1.162 1.00 63.66 O
ATOM 27 OP2 G B 255 82.515 117.322 0.307 1.00 65.04 O
ATOM 28 O5' G B 255 82.505 116.825 -2.113 1.00 66.10 O
TER
ATOM 2 P G A 237 85.419 124.474 -7.645 1.00 73.25 P
ATOM 3 OP1 G A 237 83.977 124.815 -7.691 1.00 72.54 O
ATOM 4 OP2 G A 237 86.425 125.475 -8.103 1.00 72.60 O
ATOM 5 O5' G A 237 85.742 124.032 -6.150 1.00 72.46 O
ATOM 6 C5' G A 237 85.000 122.963 -5.525 1.00 71.73 C
ATOM 7 C4' G A 237 85.132 123.042 -4.018 1.00 71.45 C
ATOM 8 O4' G A 237 86.529 122.849 -3.639 1.00 71.44 O
ATOM 9 C3' G A 237 84.754 124.376 -3.387 1.00 70.75 C
ATOM 10 O3' G A 237 83.346 124.553 -3.211 1.00 69.12 O
ATOM 11 C2' G A 237 85.528 124.337 -2.077 1.00 71.19 C
ATOM 12 O2' G A 237 84.885 123.571 -1.077 1.00 70.61 O
ATOM 13 C1' G A 237 86.837 123.670 -2.521 1.00 71.56 C
ATOM 14 N9 G A 237 87.862 124.640 -2.920 1.00 72.36 N
ATOM 15 C8 G A 237 88.303 124.913 -4.194 1.00 72.66 C
ATOM 16 N7 G A 237 89.209 125.858 -4.234 1.00 73.21 N
ATOM 17 C5 G A 237 89.388 126.227 -2.905 1.00 73.39 C
ATOM 18 C6 G A 237 90.248 127.220 -2.311 1.00 73.44 C
ATOM 19 O6 G A 237 91.054 127.985 -2.860 1.00 72.97 O
ATOM 20 N1 G A 237 90.091 127.265 -0.930 1.00 73.51 N
ATOM 21 C2 G A 237 89.232 126.471 -0.210 1.00 74.05 C
ATOM 22 N2 G A 237 89.214 126.671 1.109 1.00 74.95 N
ATOM 23 N3 G A 237 88.443 125.552 -0.740 1.00 73.98 N
ATOM 24 C4 G A 237 88.568 125.484 -2.080 1.00 73.15 C
ATOM 25 P C A 238 82.741 126.039 -3.085 1.00 66.92 P
ATOM 26 OP1 C A 238 81.267 125.912 -3.073 1.00 67.16 O
ATOM 27 OP2 C A 238 83.396 126.937 -4.080 1.00 67.41 O
ATOM 28 O5' C A 238 83.158 126.480 -1.619 1.00 67.21 O
TER
ATOM 1 O3' U B 253 86.303 122.034 3.004 1.00 60.59 O
ATOM 2 P G B 254 85.240 120.811 3.057 1.00 60.11 P
ATOM 3 OP1 G B 254 83.927 121.394 3.467 1.00 57.87 O
ATOM 4 OP2 G B 254 85.795 119.638 3.797 1.00 57.03 O
ATOM 5 O5' G B 254 85.104 120.372 1.533 1.00 60.96 O
ATOM 6 C5' G B 254 84.513 121.270 0.572 1.00 62.40 C
ATOM 7 C4' G B 254 84.686 120.748 -0.842 1.00 62.91 C
ATOM 8 O4' G B 254 86.094 120.757 -1.217 1.00 62.53 O
ATOM 9 C3' G B 254 84.221 119.330 -1.145 1.00 62.84 C
ATOM 10 O3' G B 254 82.802 119.242 -1.324 1.00 64.29 O
ATOM 11 C2' G B 254 85.001 119.029 -2.422 1.00 62.38 C
ATOM 12 O2' G B 254 84.484 119.650 -3.580 1.00 63.37 O
ATOM 13 C1' G B 254 86.346 119.692 -2.118 1.00 61.96 C
ATOM 14 N9 G B 254 87.228 118.737 -1.465 1.00 60.43 N
ATOM 15 C8 G B 254 87.631 118.735 -0.157 1.00 59.72 C
ATOM 16 N7 G B 254 88.368 117.705 0.145 1.00 60.66 N
ATOM 17 C5 G B 254 88.472 116.993 -1.039 1.00 61.11 C
ATOM 18 C6 G B 254 89.149 115.770 -1.323 1.00 61.43 C
ATOM 19 O6 G B 254 89.799 115.054 -0.552 1.00 61.81 O
ATOM 20 N1 G B 254 89.005 115.400 -2.652 1.00 62.01 N
ATOM 21 C2 G B 254 88.296 116.109 -3.589 1.00 63.09 C
ATOM 22 N2 G B 254 88.265 115.589 -4.821 1.00 64.44 N
ATOM 23 N3 G B 254 87.657 117.248 -3.336 1.00 62.38 N
ATOM 24 C4 G B 254 87.788 117.625 -2.046 1.00 61.19 C
ATOM 25 P G B 255 82.023 117.858 -0.989 1.00 64.64 P
ATOM 26 OP1 G B 255 80.564 118.113 -1.162 1.00 63.66 O
ATOM 27 OP2 G B 255 82.515 117.322 0.307 1.00 65.04 O
ATOM 28 O5' G B 255 82.505 116.825 -2.113 1.00 66.10 O
TER
Atoms:
OP1: (83.977,124.815,-7.691)
OP2: (86.425,125.475,-8.103)
C3': (84.754,124.376,-3.387)
C1': (86.837,123.670,-2.521)
C5': (85.000,122.963,-5.525)
O6: (91.054,127.985,-2.860)
O4': (86.529,122.849,-3.639)
C8: (88.303,124.913,-4.194)
C2: (89.232,126.471,-0.210)
C6: (90.248,127.220,-2.311)
C5: (89.388,126.227,-2.905)
C4: (88.568,125.484,-2.080)
P: (85.419,124.474,-7.645)
C4': (85.132,123.042,-4.018)
C2': (85.528,124.337,-2.077)
O2': (84.885,123.571,-1.077)
N1: (90.091,127.265,-0.930)
N2: (89.214,126.671,1.109)
N3: (88.443,125.552,-0.740)
N7: (89.209,125.858,-4.234)
N9: (87.862,124.640,-2.920)
O5': (85.742,124.032,-6.150)
O3': (83.346,124.553,-3.211)
OP2: (86.425,125.475,-8.103)
C3': (84.754,124.376,-3.387)
C1': (86.837,123.670,-2.521)
C5': (85.000,122.963,-5.525)
O6: (91.054,127.985,-2.860)
O4': (86.529,122.849,-3.639)
C8: (88.303,124.913,-4.194)
C2: (89.232,126.471,-0.210)
C6: (90.248,127.220,-2.311)
C5: (89.388,126.227,-2.905)
C4: (88.568,125.484,-2.080)
P: (85.419,124.474,-7.645)
C4': (85.132,123.042,-4.018)
C2': (85.528,124.337,-2.077)
O2': (84.885,123.571,-1.077)
N1: (90.091,127.265,-0.930)
N2: (89.214,126.671,1.109)
N3: (88.443,125.552,-0.740)
N7: (89.209,125.858,-4.234)
N9: (87.862,124.640,-2.920)
O5': (85.742,124.032,-6.150)
O3': (83.346,124.553,-3.211)
OP1: (83.927,121.394,3.467)
OP2: (85.795,119.638,3.797)
C3': (84.221,119.330,-1.145)
C1': (86.346,119.692,-2.118)
C5': (84.513,121.270,0.572)
O6: (89.799,115.054,-0.552)
O4': (86.094,120.757,-1.217)
C8: (87.631,118.735,-0.157)
C2: (88.296,116.109,-3.589)
C6: (89.149,115.770,-1.323)
C5: (88.472,116.993,-1.039)
C4: (87.788,117.625,-2.046)
P: (85.240,120.811,3.057)
C4': (84.686,120.748,-0.842)
C2': (85.001,119.029,-2.422)
O2': (84.484,119.650,-3.580)
N1: (89.005,115.400,-2.652)
N2: (88.265,115.589,-4.821)
N3: (87.657,117.248,-3.336)
N7: (88.368,117.705,0.145)
N9: (87.228,118.737,-1.465)
O5': (85.104,120.372,1.533)
O3': (82.802,119.242,-1.324)
OP2: (85.795,119.638,3.797)
C3': (84.221,119.330,-1.145)
C1': (86.346,119.692,-2.118)
C5': (84.513,121.270,0.572)
O6: (89.799,115.054,-0.552)
O4': (86.094,120.757,-1.217)
C8: (87.631,118.735,-0.157)
C2: (88.296,116.109,-3.589)
C6: (89.149,115.770,-1.323)
C5: (88.472,116.993,-1.039)
C4: (87.788,117.625,-2.046)
P: (85.240,120.811,3.057)
C4': (84.686,120.748,-0.842)
C2': (85.001,119.029,-2.422)
O2': (84.484,119.650,-3.580)
N1: (89.005,115.400,-2.652)
N2: (88.265,115.589,-4.821)
N3: (87.657,117.248,-3.336)
N7: (88.368,117.705,0.145)
N9: (87.228,118.737,-1.465)
O5': (85.104,120.372,1.533)
O3': (82.802,119.242,-1.324)
Image (generated by PyMOL):