ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:944:937

Extra

PDB:
ATOM 1 O3' A A 43 80.878 19.388 99.455 1.00 62.96 O
ATOM 2 P A A 44 79.778 18.992 98.354 1.00 63.55 P
ATOM 3 OP1 A A 44 78.521 18.704 99.094 1.00 63.59 O
ATOM 4 OP2 A A 44 80.343 17.961 97.435 1.00 62.04 O
ATOM 5 O5' A A 44 79.572 20.334 97.520 1.00 63.74 O
ATOM 6 C5' A A 44 79.162 21.562 98.159 1.00 62.24 C
ATOM 7 C4' A A 44 79.395 22.729 97.226 1.00 61.73 C
ATOM 8 O4' A A 44 80.821 22.888 96.993 1.00 61.64 O
ATOM 9 C3' A A 44 78.806 22.560 95.834 1.00 61.34 C
ATOM 10 O3' A A 44 77.430 22.923 95.811 1.00 60.51 O
ATOM 11 C2' A A 44 79.676 23.490 94.997 1.00 61.19 C
ATOM 12 O2' A A 44 79.300 24.846 95.128 1.00 59.53 O
ATOM 13 C1' A A 44 81.047 23.286 95.649 1.00 61.44 C
ATOM 14 N9 A A 44 81.877 22.270 94.992 1.00 61.82 N
ATOM 15 C8 A A 44 82.182 21.007 95.440 1.00 62.09 C
ATOM 16 N7 A A 44 82.946 20.325 94.621 1.00 62.21 N
ATOM 17 C5 A A 44 83.161 21.194 93.562 1.00 62.74 C
ATOM 18 C6 A A 44 83.884 21.063 92.358 1.00 63.00 C
ATOM 19 N6 A A 44 84.554 19.962 92.006 1.00 62.72 N
ATOM 20 N1 A A 44 83.892 22.118 91.516 1.00 62.70 N
ATOM 21 C2 A A 44 83.222 23.221 91.864 1.00 62.16 C
ATOM 22 N3 A A 44 82.506 23.464 92.960 1.00 62.51 N
ATOM 23 C4 A A 44 82.513 22.397 93.778 1.00 62.24 C
ATOM 24 P C A 45 76.385 22.060 94.944 1.00 59.84 P
ATOM 25 OP1 C A 45 75.061 22.708 95.154 1.00 60.71 O
ATOM 26 OP2 C A 45 76.556 20.616 95.259 1.00 60.86 O
ATOM 27 O5' C A 45 76.834 22.277 93.430 1.00 58.14 O
TER

ATOM 1 O3' C B 36 82.622 21.800 82.148 1.00 58.14 O
ATOM 2 P A B 37 84.109 22.346 82.414 1.00 57.75 P
ATOM 3 OP1 A B 37 84.146 23.762 81.977 1.00 58.70 O
ATOM 4 OP2 A B 37 85.086 21.375 81.844 1.00 58.88 O
ATOM 5 O5' A B 37 84.231 22.333 83.998 1.00 56.65 O
ATOM 6 C5' A B 37 83.412 23.196 84.790 1.00 58.82 C
ATOM 7 C4' A B 37 83.681 22.975 86.254 1.00 61.86 C
ATOM 8 O4' A B 37 83.317 21.617 86.616 1.00 62.07 O
ATOM 9 C3' A B 37 85.130 23.082 86.693 1.00 62.69 C
ATOM 10 O3' A B 37 85.539 24.429 86.855 1.00 65.89 O
ATOM 11 C2' A B 37 85.101 22.321 88.010 1.00 62.58 C
ATOM 12 O2' A B 37 84.500 23.064 89.051 1.00 62.64 O
ATOM 13 C1' A B 37 84.171 21.163 87.653 1.00 61.99 C
ATOM 14 N9 A B 37 84.897 19.982 87.182 1.00 61.52 N
ATOM 15 C8 A B 37 85.146 19.574 85.892 1.00 61.65 C
ATOM 16 N7 A B 37 85.820 18.452 85.814 1.00 61.70 N
ATOM 17 C5 A B 37 86.031 18.099 87.141 1.00 61.28 C
ATOM 18 C6 A B 37 86.681 17.006 87.738 1.00 60.87 C
ATOM 19 N6 A B 37 87.268 16.023 87.048 1.00 60.45 N
ATOM 20 N1 A B 37 86.709 16.955 89.087 1.00 60.84 N
ATOM 21 C2 A B 37 86.121 17.938 89.781 1.00 61.32 C
ATOM 22 N3 A B 37 85.481 19.013 89.336 1.00 61.51 N
ATOM 23 C4 A B 37 85.471 19.034 87.992 1.00 60.93 C
ATOM 24 P U B 38 87.062 24.847 86.541 1.00 69.72 P
ATOM 25 OP1 U B 38 87.022 26.033 85.649 1.00 71.30 O
ATOM 26 OP2 U B 38 87.855 23.653 86.137 1.00 70.59 O
ATOM 27 O5' U B 38 87.613 25.337 87.946 1.00 69.24 O
TER

Atoms:
OP1: (78.521,18.704,99.094)
OP2: (80.343,17.961,97.435)
C3': (78.806,22.560,95.834)
C1': (81.047,23.286,95.649)
C5': (79.162,21.562,98.159)
O4': (80.821,22.888,96.993)
C8: (82.182,21.007,95.440)
O2': (79.300,24.846,95.128)
C6: (83.884,21.063,92.358)
C5: (83.161,21.194,93.562)
C4: (82.513,22.397,93.778)
P: (79.778,18.992,98.354)
C4': (79.395,22.729,97.226)
C2': (79.676,23.490,94.997)
C2: (83.222,23.221,91.864)
N1: (83.892,22.118,91.516)
N3: (82.506,23.464,92.960)
N6: (84.554,19.962,92.006)
N7: (82.946,20.325,94.621)
N9: (81.877,22.270,94.992)
O5': (79.572,20.334,97.520)
O3': (77.430,22.923,95.811)
OP1: (84.146,23.762,81.977)
OP2: (85.086,21.375,81.844)
C3': (85.130,23.082,86.693)
C1': (84.171,21.163,87.653)
C5': (83.412,23.196,84.790)
O4': (83.317,21.617,86.616)
C8: (85.146,19.574,85.892)
O2': (84.500,23.064,89.051)
C6: (86.681,17.006,87.738)
C5: (86.031,18.099,87.141)
C4: (85.471,19.034,87.992)
P: (84.109,22.346,82.414)
C4': (83.681,22.975,86.254)
C2': (85.101,22.321,88.010)
C2: (86.121,17.938,89.781)
N1: (86.709,16.955,89.087)
N3: (85.481,19.013,89.336)
N6: (87.268,16.023,87.048)
N7: (85.820,18.452,85.814)
N9: (84.897,19.982,87.182)
O5': (84.231,22.333,83.998)
O3': (85.539,24.429,86.855)
Image (generated by PyMOL):
PyMOL image
show in jmol