ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q82:A237:A254

Extra

PDB:
ATOM 1 O3' A A 236 85.602 123.827 -8.679 1.00 63.47 O
ATOM 2 P G A 237 85.370 125.164 -7.820 1.00 63.74 P
ATOM 3 OP1 G A 237 83.945 125.519 -7.982 1.00 63.35 O
ATOM 4 OP2 G A 237 86.426 126.145 -8.194 1.00 64.32 O
ATOM 5 O5' G A 237 85.643 124.736 -6.312 1.00 63.20 O
ATOM 6 C5' G A 237 84.910 123.672 -5.693 1.00 61.73 C
ATOM 7 C4' G A 237 85.041 123.768 -4.194 1.00 61.03 C
ATOM 8 O4' G A 237 86.443 123.638 -3.826 1.00 60.60 O
ATOM 9 C3' G A 237 84.648 125.119 -3.629 1.00 60.49 C
ATOM 10 O3' G A 237 83.240 125.246 -3.455 1.00 60.14 O
ATOM 11 C2' G A 237 85.423 125.166 -2.320 1.00 60.45 C
ATOM 12 O2' G A 237 84.798 124.443 -1.281 1.00 61.02 O
ATOM 13 C1' G A 237 86.730 124.476 -2.717 1.00 59.80 C
ATOM 14 N9 G A 237 87.772 125.425 -3.097 1.00 58.79 N
ATOM 15 C8 G A 237 88.270 125.666 -4.352 1.00 59.00 C
ATOM 16 N7 G A 237 89.190 126.595 -4.365 1.00 58.83 N
ATOM 17 C5 G A 237 89.305 126.989 -3.039 1.00 57.77 C
ATOM 18 C6 G A 237 90.131 127.965 -2.444 1.00 56.61 C
ATOM 19 O6 G A 237 90.950 128.706 -2.983 1.00 56.25 O
ATOM 20 N1 G A 237 89.926 128.041 -1.076 1.00 55.49 N
ATOM 21 C2 G A 237 89.031 127.278 -0.369 1.00 55.73 C
ATOM 22 N2 G A 237 88.960 127.496 0.944 1.00 56.63 N
ATOM 23 N3 G A 237 88.256 126.366 -0.912 1.00 56.99 N
ATOM 24 C4 G A 237 88.443 126.274 -2.242 1.00 58.03 C
ATOM 25 P C A 238 82.597 126.704 -3.270 1.00 59.73 P
ATOM 26 OP1 C A 238 81.117 126.594 -3.289 1.00 59.88 O
ATOM 27 OP2 C A 238 83.276 127.606 -4.241 1.00 60.28 O
ATOM 28 O5' C A 238 83.042 127.122 -1.798 1.00 58.97 O
TER

ATOM 1 O3' U B 253 86.251 122.659 2.867 1.00 50.38 O
ATOM 2 P G B 254 85.158 121.486 2.855 1.00 52.14 P
ATOM 3 OP1 G B 254 83.862 122.096 3.248 1.00 50.09 O
ATOM 4 OP2 G B 254 85.684 120.302 3.598 1.00 50.47 O
ATOM 5 O5' G B 254 85.053 121.096 1.313 1.00 53.35 O
ATOM 6 C5' G B 254 84.454 122.003 0.364 1.00 52.97 C
ATOM 7 C4' G B 254 84.626 121.490 -1.047 1.00 52.86 C
ATOM 8 O4' G B 254 86.045 121.461 -1.378 1.00 52.34 O
ATOM 9 C3' G B 254 84.169 120.065 -1.321 1.00 53.05 C
ATOM 10 O3' G B 254 82.761 119.906 -1.489 1.00 53.82 O
ATOM 11 C2' G B 254 84.959 119.722 -2.576 1.00 53.04 C
ATOM 12 O2' G B 254 84.430 120.263 -3.767 1.00 53.93 O
ATOM 13 C1' G B 254 86.299 120.389 -2.271 1.00 51.75 C
ATOM 14 N9 G B 254 87.188 119.437 -1.627 1.00 50.18 N
ATOM 15 C8 G B 254 87.630 119.439 -0.331 1.00 50.19 C
ATOM 16 N7 G B 254 88.408 118.430 -0.059 1.00 50.89 N
ATOM 17 C5 G B 254 88.481 117.723 -1.251 1.00 51.47 C
ATOM 18 C6 G B 254 89.171 116.526 -1.576 1.00 52.64 C
ATOM 19 O6 G B 254 89.891 115.834 -0.854 1.00 54.43 O
ATOM 20 N1 G B 254 88.954 116.150 -2.898 1.00 52.50 N
ATOM 21 C2 G B 254 88.172 116.837 -3.796 1.00 52.69 C
ATOM 22 N2 G B 254 88.069 116.320 -5.027 1.00 52.92 N
ATOM 23 N3 G B 254 87.532 117.953 -3.506 1.00 52.15 N
ATOM 24 C4 G B 254 87.731 118.335 -2.225 1.00 50.91 C
ATOM 25 P G B 255 82.068 118.496 -1.112 1.00 54.37 P
ATOM 26 OP1 G B 255 80.606 118.700 -1.225 1.00 53.23 O
ATOM 27 OP2 G B 255 82.630 117.978 0.155 1.00 54.61 O
ATOM 28 O5' G B 255 82.543 117.509 -2.273 1.00 55.24 O
TER

Atoms:
OP1: (83.945,125.519,-7.982)
OP2: (86.426,126.145,-8.194)
C3': (84.648,125.119,-3.629)
C1': (86.730,124.476,-2.717)
C5': (84.910,123.672,-5.693)
O6: (90.950,128.706,-2.983)
O4': (86.443,123.638,-3.826)
C8: (88.270,125.666,-4.352)
C2: (89.031,127.278,-0.369)
C6: (90.131,127.965,-2.444)
C5: (89.305,126.989,-3.039)
C4: (88.443,126.274,-2.242)
P: (85.370,125.164,-7.820)
C4': (85.041,123.768,-4.194)
C2': (85.423,125.166,-2.320)
O2': (84.798,124.443,-1.281)
N1: (89.926,128.041,-1.076)
N2: (88.960,127.496,0.944)
N3: (88.256,126.366,-0.912)
N7: (89.190,126.595,-4.365)
N9: (87.772,125.425,-3.097)
O5': (85.643,124.736,-6.312)
O3': (83.240,125.246,-3.455)
OP1: (83.862,122.096,3.248)
OP2: (85.684,120.302,3.598)
C3': (84.169,120.065,-1.321)
C1': (86.299,120.389,-2.271)
C5': (84.454,122.003,0.364)
O6: (89.891,115.834,-0.854)
O4': (86.045,121.461,-1.378)
C8: (87.630,119.439,-0.331)
C2: (88.172,116.837,-3.796)
C6: (89.171,116.526,-1.576)
C5: (88.481,117.723,-1.251)
C4: (87.731,118.335,-2.225)
P: (85.158,121.486,2.855)
C4': (84.626,121.490,-1.047)
C2': (84.959,119.722,-2.576)
O2': (84.430,120.263,-3.767)
N1: (88.954,116.150,-2.898)
N2: (88.069,116.320,-5.027)
N3: (87.532,117.953,-3.506)
N7: (88.408,118.430,-0.059)
N9: (87.188,119.437,-1.627)
O5': (85.053,121.096,1.313)
O3': (82.761,119.906,-1.489)
Image (generated by PyMOL):
PyMOL image
show in jmol