ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1S72:0237:0254

Extra

PDB:
ATOM 1 O3' A A 236 85.412 123.105 -9.075 1.00 44.51 O
ATOM 2 P G A 237 85.166 124.433 -8.209 1.00 49.80 P
ATOM 3 OP1 G A 237 83.724 124.774 -8.357 1.00 47.95 O
ATOM 4 OP2 G A 237 86.200 125.443 -8.555 1.00 50.28 O
ATOM 5 O5' G A 237 85.428 123.987 -6.701 1.00 51.00 O
ATOM 6 C5' G A 237 84.607 122.988 -6.062 1.00 48.84 C
ATOM 7 C4' G A 237 84.719 123.118 -4.566 1.00 48.74 C
ATOM 8 O4' G A 237 86.111 122.949 -4.179 1.00 48.88 O
ATOM 9 C3' G A 237 84.345 124.484 -4.014 1.00 48.35 C
ATOM 10 O3' G A 237 82.938 124.612 -3.832 1.00 48.85 O
ATOM 11 C2' G A 237 85.110 124.526 -2.700 1.00 48.19 C
ATOM 12 O2' G A 237 84.456 123.822 -1.668 1.00 49.36 O
ATOM 13 C1' G A 237 86.404 123.800 -3.080 1.00 48.42 C
ATOM 14 N9 G A 237 87.477 124.714 -3.459 1.00 48.57 N
ATOM 15 C8 G A 237 87.955 124.975 -4.722 1.00 49.98 C
ATOM 16 N7 G A 237 88.911 125.865 -4.734 1.00 49.10 N
ATOM 17 C5 G A 237 89.076 126.208 -3.400 1.00 49.10 C
ATOM 18 C6 G A 237 89.961 127.127 -2.790 1.00 49.63 C
ATOM 19 O6 G A 237 90.804 127.855 -3.323 1.00 50.56 O
ATOM 20 N1 G A 237 89.794 127.156 -1.409 1.00 50.24 N
ATOM 21 C2 G A 237 88.887 126.405 -0.710 1.00 48.95 C
ATOM 22 N2 G A 237 88.865 126.571 0.613 1.00 49.37 N
ATOM 23 N3 G A 237 88.057 125.552 -1.267 1.00 50.43 N
ATOM 24 C4 G A 237 88.204 125.502 -2.603 1.00 48.77 C
ATOM 25 P C A 238 82.288 126.070 -3.635 1.00 50.14 P
ATOM 26 OP1 C A 238 80.808 125.931 -3.674 1.00 50.15 O
ATOM 27 OP2 C A 238 82.957 126.995 -4.578 1.00 50.53 O
ATOM 28 O5' C A 238 82.724 126.492 -2.159 1.00 50.59 O
TER

ATOM 1 O3' U B 253 86.029 122.018 2.387 1.00 38.89 O
ATOM 2 P G B 254 84.966 120.814 2.436 1.00 39.57 P
ATOM 3 OP1 G B 254 83.686 121.395 2.920 1.00 38.82 O
ATOM 4 OP2 G B 254 85.570 119.663 3.158 1.00 41.06 O
ATOM 5 O5' G B 254 84.785 120.381 0.911 1.00 41.65 O
ATOM 6 C5' G B 254 84.136 121.257 -0.036 1.00 42.52 C
ATOM 7 C4' G B 254 84.343 120.766 -1.451 1.00 42.57 C
ATOM 8 O4' G B 254 85.763 120.740 -1.765 1.00 42.15 O
ATOM 9 C3' G B 254 83.890 119.350 -1.763 1.00 42.95 C
ATOM 10 O3' G B 254 82.490 119.256 -2.000 1.00 44.06 O
ATOM 11 C2' G B 254 84.681 119.053 -3.025 1.00 42.64 C
ATOM 12 O2' G B 254 84.121 119.710 -4.146 1.00 43.38 O
ATOM 13 C1' G B 254 86.030 119.682 -2.675 1.00 41.10 C
ATOM 14 N9 G B 254 86.914 118.721 -2.021 1.00 40.95 N
ATOM 15 C8 G B 254 87.330 118.728 -0.712 1.00 38.92 C
ATOM 16 N7 G B 254 88.104 117.722 -0.417 1.00 39.13 N
ATOM 17 C5 G B 254 88.207 117.005 -1.600 1.00 40.12 C
ATOM 18 C6 G B 254 88.912 115.808 -1.891 1.00 41.08 C
ATOM 19 O6 G B 254 89.585 115.107 -1.129 1.00 43.11 O
ATOM 20 N1 G B 254 88.764 115.439 -3.221 1.00 41.73 N
ATOM 21 C2 G B 254 88.013 116.120 -4.150 1.00 42.77 C
ATOM 22 N2 G B 254 87.979 115.601 -5.384 1.00 42.83 N
ATOM 23 N3 G B 254 87.341 117.227 -3.887 1.00 42.49 N
ATOM 24 C4 G B 254 87.485 117.611 -2.601 1.00 41.16 C
ATOM 25 P G B 255 81.735 117.859 -1.743 1.00 43.66 P
ATOM 26 OP1 G B 255 80.283 118.125 -1.926 1.00 41.74 O
ATOM 27 OP2 G B 255 82.227 117.285 -0.462 1.00 43.19 O
ATOM 28 O5' G B 255 82.254 116.898 -2.904 1.00 44.01 O
TER

Atoms:
OP1: (83.724,124.774,-8.357)
OP2: (86.200,125.443,-8.555)
C3': (84.345,124.484,-4.014)
C1': (86.404,123.800,-3.080)
C5': (84.607,122.988,-6.062)
O6: (90.804,127.855,-3.323)
O4': (86.111,122.949,-4.179)
C8: (87.955,124.975,-4.722)
C2: (88.887,126.405,-0.710)
C6: (89.961,127.127,-2.790)
C5: (89.076,126.208,-3.400)
C4: (88.204,125.502,-2.603)
P: (85.166,124.433,-8.209)
C4': (84.719,123.118,-4.566)
C2': (85.110,124.526,-2.700)
O2': (84.456,123.822,-1.668)
N1: (89.794,127.156,-1.409)
N2: (88.865,126.571,0.613)
N3: (88.057,125.552,-1.267)
N7: (88.911,125.865,-4.734)
N9: (87.477,124.714,-3.459)
O5': (85.428,123.987,-6.701)
O3': (82.938,124.612,-3.832)
OP1: (83.686,121.395,2.920)
OP2: (85.570,119.663,3.158)
C3': (83.890,119.350,-1.763)
C1': (86.030,119.682,-2.675)
C5': (84.136,121.257,-0.036)
O6: (89.585,115.107,-1.129)
O4': (85.763,120.740,-1.765)
C8: (87.330,118.728,-0.712)
C2: (88.013,116.120,-4.150)
C6: (88.912,115.808,-1.891)
C5: (88.207,117.005,-1.600)
C4: (87.485,117.611,-2.601)
P: (84.966,120.814,2.436)
C4': (84.343,120.766,-1.451)
C2': (84.681,119.053,-3.025)
O2': (84.121,119.710,-4.146)
N1: (88.764,115.439,-3.221)
N2: (87.979,115.601,-5.384)
N3: (87.341,117.227,-3.887)
N7: (88.104,117.722,-0.417)
N9: (86.914,118.721,-2.021)
O5': (84.785,120.381,0.911)
O3': (82.490,119.256,-2.000)
Image (generated by PyMOL):
PyMOL image
show in jmol