Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.827 123.847 -8.751 1.00 68.02 O
ATOM 2 P G A 237 85.550 125.161 -7.867 1.00 70.72 P
ATOM 3 OP1 G A 237 84.087 125.442 -7.936 1.00 69.06 O
ATOM 4 OP2 G A 237 86.518 126.220 -8.249 1.00 70.82 O
ATOM 5 O5' G A 237 85.904 124.715 -6.381 1.00 72.07 O
ATOM 6 C5' G A 237 85.152 123.683 -5.724 1.00 71.87 C
ATOM 7 C4' G A 237 85.281 123.824 -4.231 1.00 70.99 C
ATOM 8 O4' G A 237 86.673 123.676 -3.851 1.00 71.01 O
ATOM 9 C3' G A 237 84.881 125.178 -3.674 1.00 69.54 C
ATOM 10 O3' G A 237 83.473 125.237 -3.486 1.00 68.81 O
ATOM 11 C2' G A 237 85.643 125.221 -2.358 1.00 70.59 C
ATOM 12 O2' G A 237 84.994 124.502 -1.332 1.00 71.75 O
ATOM 13 C1' G A 237 86.943 124.502 -2.736 1.00 71.14 C
ATOM 14 N9 G A 237 88.035 125.409 -3.076 1.00 71.78 N
ATOM 15 C8 G A 237 88.601 125.624 -4.310 1.00 71.93 C
ATOM 16 N7 G A 237 89.554 126.517 -4.288 1.00 71.67 N
ATOM 17 C5 G A 237 89.625 126.910 -2.957 1.00 72.18 C
ATOM 18 C6 G A 237 90.467 127.855 -2.318 1.00 71.59 C
ATOM 19 O6 G A 237 91.356 128.557 -2.812 1.00 71.26 O
ATOM 20 N1 G A 237 90.194 127.943 -0.959 1.00 72.02 N
ATOM 21 C2 G A 237 89.237 127.217 -0.297 1.00 71.95 C
ATOM 22 N2 G A 237 89.116 127.444 1.013 1.00 73.52 N
ATOM 23 N3 G A 237 88.453 126.334 -0.877 1.00 72.32 N
ATOM 24 C4 G A 237 88.698 126.232 -2.198 1.00 72.40 C
ATOM 25 P C A 238 82.752 126.655 -3.264 1.00 68.96 P
ATOM 26 OP1 C A 238 81.287 126.424 -3.258 1.00 68.54 O
ATOM 27 OP2 C A 238 83.334 127.628 -4.225 1.00 68.23 O
ATOM 28 O5' C A 238 83.182 127.072 -1.788 1.00 69.30 O
TER
ATOM 1 O3' U B 253 86.277 122.706 2.784 1.00 57.96 O
ATOM 2 P G B 254 85.228 121.492 2.791 1.00 58.33 P
ATOM 3 OP1 G B 254 83.923 122.039 3.242 1.00 56.68 O
ATOM 4 OP2 G B 254 85.848 120.352 3.523 1.00 56.28 O
ATOM 5 O5' G B 254 85.090 121.086 1.257 1.00 59.83 O
ATOM 6 C5' G B 254 84.487 121.988 0.309 1.00 62.65 C
ATOM 7 C4' G B 254 84.676 121.483 -1.107 1.00 64.13 C
ATOM 8 O4' G B 254 86.092 121.456 -1.448 1.00 63.41 O
ATOM 9 C3' G B 254 84.226 120.059 -1.389 1.00 64.82 C
ATOM 10 O3' G B 254 82.818 119.934 -1.552 1.00 64.95 O
ATOM 11 C2' G B 254 84.986 119.755 -2.671 1.00 64.29 C
ATOM 12 O2' G B 254 84.414 120.388 -3.800 1.00 64.75 O
ATOM 13 C1' G B 254 86.339 120.396 -2.362 1.00 62.34 C
ATOM 14 N9 G B 254 87.238 119.438 -1.730 1.00 61.89 N
ATOM 15 C8 G B 254 87.691 119.451 -0.435 1.00 62.03 C
ATOM 16 N7 G B 254 88.479 118.450 -0.159 1.00 62.47 N
ATOM 17 C5 G B 254 88.556 117.733 -1.342 1.00 62.75 C
ATOM 18 C6 G B 254 89.266 116.538 -1.653 1.00 64.67 C
ATOM 19 O6 G B 254 89.989 115.855 -0.918 1.00 66.15 O
ATOM 20 N1 G B 254 89.064 116.154 -2.972 1.00 65.18 N
ATOM 21 C2 G B 254 88.275 116.822 -3.875 1.00 64.91 C
ATOM 22 N2 G B 254 88.201 116.285 -5.099 1.00 66.27 N
ATOM 23 N3 G B 254 87.607 117.931 -3.599 1.00 63.41 N
ATOM 24 C4 G B 254 87.795 118.328 -2.323 1.00 62.53 C
ATOM 25 P G B 255 82.123 118.507 -1.309 1.00 65.38 P
ATOM 26 OP1 G B 255 80.657 118.681 -1.450 1.00 65.69 O
ATOM 27 OP2 G B 255 82.676 117.929 -0.058 1.00 67.02 O
ATOM 28 O5' G B 255 82.648 117.602 -2.512 1.00 66.66 O
TER
ATOM 2 P G A 237 85.550 125.161 -7.867 1.00 70.72 P
ATOM 3 OP1 G A 237 84.087 125.442 -7.936 1.00 69.06 O
ATOM 4 OP2 G A 237 86.518 126.220 -8.249 1.00 70.82 O
ATOM 5 O5' G A 237 85.904 124.715 -6.381 1.00 72.07 O
ATOM 6 C5' G A 237 85.152 123.683 -5.724 1.00 71.87 C
ATOM 7 C4' G A 237 85.281 123.824 -4.231 1.00 70.99 C
ATOM 8 O4' G A 237 86.673 123.676 -3.851 1.00 71.01 O
ATOM 9 C3' G A 237 84.881 125.178 -3.674 1.00 69.54 C
ATOM 10 O3' G A 237 83.473 125.237 -3.486 1.00 68.81 O
ATOM 11 C2' G A 237 85.643 125.221 -2.358 1.00 70.59 C
ATOM 12 O2' G A 237 84.994 124.502 -1.332 1.00 71.75 O
ATOM 13 C1' G A 237 86.943 124.502 -2.736 1.00 71.14 C
ATOM 14 N9 G A 237 88.035 125.409 -3.076 1.00 71.78 N
ATOM 15 C8 G A 237 88.601 125.624 -4.310 1.00 71.93 C
ATOM 16 N7 G A 237 89.554 126.517 -4.288 1.00 71.67 N
ATOM 17 C5 G A 237 89.625 126.910 -2.957 1.00 72.18 C
ATOM 18 C6 G A 237 90.467 127.855 -2.318 1.00 71.59 C
ATOM 19 O6 G A 237 91.356 128.557 -2.812 1.00 71.26 O
ATOM 20 N1 G A 237 90.194 127.943 -0.959 1.00 72.02 N
ATOM 21 C2 G A 237 89.237 127.217 -0.297 1.00 71.95 C
ATOM 22 N2 G A 237 89.116 127.444 1.013 1.00 73.52 N
ATOM 23 N3 G A 237 88.453 126.334 -0.877 1.00 72.32 N
ATOM 24 C4 G A 237 88.698 126.232 -2.198 1.00 72.40 C
ATOM 25 P C A 238 82.752 126.655 -3.264 1.00 68.96 P
ATOM 26 OP1 C A 238 81.287 126.424 -3.258 1.00 68.54 O
ATOM 27 OP2 C A 238 83.334 127.628 -4.225 1.00 68.23 O
ATOM 28 O5' C A 238 83.182 127.072 -1.788 1.00 69.30 O
TER
ATOM 1 O3' U B 253 86.277 122.706 2.784 1.00 57.96 O
ATOM 2 P G B 254 85.228 121.492 2.791 1.00 58.33 P
ATOM 3 OP1 G B 254 83.923 122.039 3.242 1.00 56.68 O
ATOM 4 OP2 G B 254 85.848 120.352 3.523 1.00 56.28 O
ATOM 5 O5' G B 254 85.090 121.086 1.257 1.00 59.83 O
ATOM 6 C5' G B 254 84.487 121.988 0.309 1.00 62.65 C
ATOM 7 C4' G B 254 84.676 121.483 -1.107 1.00 64.13 C
ATOM 8 O4' G B 254 86.092 121.456 -1.448 1.00 63.41 O
ATOM 9 C3' G B 254 84.226 120.059 -1.389 1.00 64.82 C
ATOM 10 O3' G B 254 82.818 119.934 -1.552 1.00 64.95 O
ATOM 11 C2' G B 254 84.986 119.755 -2.671 1.00 64.29 C
ATOM 12 O2' G B 254 84.414 120.388 -3.800 1.00 64.75 O
ATOM 13 C1' G B 254 86.339 120.396 -2.362 1.00 62.34 C
ATOM 14 N9 G B 254 87.238 119.438 -1.730 1.00 61.89 N
ATOM 15 C8 G B 254 87.691 119.451 -0.435 1.00 62.03 C
ATOM 16 N7 G B 254 88.479 118.450 -0.159 1.00 62.47 N
ATOM 17 C5 G B 254 88.556 117.733 -1.342 1.00 62.75 C
ATOM 18 C6 G B 254 89.266 116.538 -1.653 1.00 64.67 C
ATOM 19 O6 G B 254 89.989 115.855 -0.918 1.00 66.15 O
ATOM 20 N1 G B 254 89.064 116.154 -2.972 1.00 65.18 N
ATOM 21 C2 G B 254 88.275 116.822 -3.875 1.00 64.91 C
ATOM 22 N2 G B 254 88.201 116.285 -5.099 1.00 66.27 N
ATOM 23 N3 G B 254 87.607 117.931 -3.599 1.00 63.41 N
ATOM 24 C4 G B 254 87.795 118.328 -2.323 1.00 62.53 C
ATOM 25 P G B 255 82.123 118.507 -1.309 1.00 65.38 P
ATOM 26 OP1 G B 255 80.657 118.681 -1.450 1.00 65.69 O
ATOM 27 OP2 G B 255 82.676 117.929 -0.058 1.00 67.02 O
ATOM 28 O5' G B 255 82.648 117.602 -2.512 1.00 66.66 O
TER
Atoms:
OP1: (84.087,125.442,-7.936)
OP2: (86.518,126.220,-8.249)
C3': (84.881,125.178,-3.674)
C1': (86.943,124.502,-2.736)
C5': (85.152,123.683,-5.724)
O6: (91.356,128.557,-2.812)
O4': (86.673,123.676,-3.851)
C8: (88.601,125.624,-4.310)
C2: (89.237,127.217,-0.297)
C6: (90.467,127.855,-2.318)
C5: (89.625,126.910,-2.957)
C4: (88.698,126.232,-2.198)
P: (85.550,125.161,-7.867)
C4': (85.281,123.824,-4.231)
C2': (85.643,125.221,-2.358)
O2': (84.994,124.502,-1.332)
N1: (90.194,127.943,-0.959)
N2: (89.116,127.444,1.013)
N3: (88.453,126.334,-0.877)
N7: (89.554,126.517,-4.288)
N9: (88.035,125.409,-3.076)
O5': (85.904,124.715,-6.381)
O3': (83.473,125.237,-3.486)
OP2: (86.518,126.220,-8.249)
C3': (84.881,125.178,-3.674)
C1': (86.943,124.502,-2.736)
C5': (85.152,123.683,-5.724)
O6: (91.356,128.557,-2.812)
O4': (86.673,123.676,-3.851)
C8: (88.601,125.624,-4.310)
C2: (89.237,127.217,-0.297)
C6: (90.467,127.855,-2.318)
C5: (89.625,126.910,-2.957)
C4: (88.698,126.232,-2.198)
P: (85.550,125.161,-7.867)
C4': (85.281,123.824,-4.231)
C2': (85.643,125.221,-2.358)
O2': (84.994,124.502,-1.332)
N1: (90.194,127.943,-0.959)
N2: (89.116,127.444,1.013)
N3: (88.453,126.334,-0.877)
N7: (89.554,126.517,-4.288)
N9: (88.035,125.409,-3.076)
O5': (85.904,124.715,-6.381)
O3': (83.473,125.237,-3.486)
OP1: (83.923,122.039,3.242)
OP2: (85.848,120.352,3.523)
C3': (84.226,120.059,-1.389)
C1': (86.339,120.396,-2.362)
C5': (84.487,121.988,0.309)
O6: (89.989,115.855,-0.918)
O4': (86.092,121.456,-1.448)
C8: (87.691,119.451,-0.435)
C2: (88.275,116.822,-3.875)
C6: (89.266,116.538,-1.653)
C5: (88.556,117.733,-1.342)
C4: (87.795,118.328,-2.323)
P: (85.228,121.492,2.791)
C4': (84.676,121.483,-1.107)
C2': (84.986,119.755,-2.671)
O2': (84.414,120.388,-3.800)
N1: (89.064,116.154,-2.972)
N2: (88.201,116.285,-5.099)
N3: (87.607,117.931,-3.599)
N7: (88.479,118.450,-0.159)
N9: (87.238,119.438,-1.730)
O5': (85.090,121.086,1.257)
O3': (82.818,119.934,-1.552)
OP2: (85.848,120.352,3.523)
C3': (84.226,120.059,-1.389)
C1': (86.339,120.396,-2.362)
C5': (84.487,121.988,0.309)
O6: (89.989,115.855,-0.918)
O4': (86.092,121.456,-1.448)
C8: (87.691,119.451,-0.435)
C2: (88.275,116.822,-3.875)
C6: (89.266,116.538,-1.653)
C5: (88.556,117.733,-1.342)
C4: (87.795,118.328,-2.323)
P: (85.228,121.492,2.791)
C4': (84.676,121.483,-1.107)
C2': (84.986,119.755,-2.671)
O2': (84.414,120.388,-3.800)
N1: (89.064,116.154,-2.972)
N2: (88.201,116.285,-5.099)
N3: (87.607,117.931,-3.599)
N7: (88.479,118.450,-0.159)
N9: (87.238,119.438,-1.730)
O5': (85.090,121.086,1.257)
O3': (82.818,119.934,-1.552)
Image (generated by PyMOL):