Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.395 123.541 -8.952 1.00 64.92 O
ATOM 2 P G A 237 85.194 124.912 -8.131 1.00 66.93 P
ATOM 3 OP1 G A 237 83.773 125.316 -8.295 1.00 63.81 O
ATOM 4 OP2 G A 237 86.274 125.861 -8.503 1.00 66.86 O
ATOM 5 O5' G A 237 85.429 124.501 -6.608 1.00 68.34 O
ATOM 6 C5' G A 237 84.629 123.478 -5.982 1.00 67.09 C
ATOM 7 C4' G A 237 84.716 123.594 -4.482 1.00 65.31 C
ATOM 8 O4' G A 237 86.092 123.392 -4.061 1.00 65.65 O
ATOM 9 C3' G A 237 84.354 124.954 -3.912 1.00 64.70 C
ATOM 10 O3' G A 237 82.951 125.120 -3.774 1.00 64.35 O
ATOM 11 C2' G A 237 85.065 124.937 -2.570 1.00 65.63 C
ATOM 12 O2' G A 237 84.358 124.209 -1.590 1.00 66.54 O
ATOM 13 C1' G A 237 86.363 124.206 -2.930 1.00 66.58 C
ATOM 14 N9 G A 237 87.433 125.139 -3.268 1.00 67.29 N
ATOM 15 C8 G A 237 87.937 125.419 -4.515 1.00 68.17 C
ATOM 16 N7 G A 237 88.875 126.327 -4.497 1.00 68.44 N
ATOM 17 C5 G A 237 89.004 126.664 -3.156 1.00 67.97 C
ATOM 18 C6 G A 237 89.860 127.599 -2.518 1.00 67.47 C
ATOM 19 O6 G A 237 90.700 128.351 -3.026 1.00 68.10 O
ATOM 20 N1 G A 237 89.663 127.613 -1.142 1.00 67.27 N
ATOM 21 C2 G A 237 88.758 126.838 -0.467 1.00 66.14 C
ATOM 22 N2 G A 237 88.718 126.997 0.855 1.00 67.23 N
ATOM 23 N3 G A 237 87.952 125.972 -1.045 1.00 67.43 N
ATOM 24 C4 G A 237 88.127 125.935 -2.383 1.00 68.28 C
ATOM 25 P C A 238 82.338 126.594 -3.574 1.00 65.62 P
ATOM 26 OP1 C A 238 80.860 126.476 -3.624 1.00 64.02 O
ATOM 27 OP2 C A 238 83.030 127.528 -4.503 1.00 64.87 O
ATOM 28 O5' C A 238 82.765 126.995 -2.090 1.00 65.80 O
TER
ATOM 1 O3' U B 253 85.943 122.402 2.642 1.00 52.95 O
ATOM 2 P G B 254 84.892 121.193 2.624 1.00 54.74 P
ATOM 3 OP1 G B 254 83.579 121.759 3.040 1.00 52.56 O
ATOM 4 OP2 G B 254 85.472 120.046 3.364 1.00 53.71 O
ATOM 5 O5' G B 254 84.797 120.787 1.085 1.00 56.25 O
ATOM 6 C5' G B 254 84.151 121.661 0.134 1.00 57.72 C
ATOM 7 C4' G B 254 84.334 121.147 -1.274 1.00 57.87 C
ATOM 8 O4' G B 254 85.749 121.115 -1.603 1.00 57.26 O
ATOM 9 C3' G B 254 83.879 119.724 -1.546 1.00 57.67 C
ATOM 10 O3' G B 254 82.478 119.628 -1.753 1.00 59.05 O
ATOM 11 C2' G B 254 84.655 119.389 -2.809 1.00 56.34 C
ATOM 12 O2' G B 254 84.086 119.971 -3.964 1.00 55.30 O
ATOM 13 C1' G B 254 85.998 120.051 -2.508 1.00 55.89 C
ATOM 14 N9 G B 254 86.918 119.109 -1.883 1.00 55.29 N
ATOM 15 C8 G B 254 87.407 119.137 -0.602 1.00 54.54 C
ATOM 16 N7 G B 254 88.205 118.139 -0.341 1.00 55.09 N
ATOM 17 C5 G B 254 88.242 117.408 -1.519 1.00 55.21 C
ATOM 18 C6 G B 254 88.931 116.206 -1.840 1.00 56.54 C
ATOM 19 O6 G B 254 89.656 115.512 -1.113 1.00 57.87 O
ATOM 20 N1 G B 254 88.698 115.821 -3.155 1.00 56.44 N
ATOM 21 C2 G B 254 87.892 116.492 -4.045 1.00 57.24 C
ATOM 22 N2 G B 254 87.781 115.961 -5.272 1.00 56.85 N
ATOM 23 N3 G B 254 87.238 117.602 -3.753 1.00 56.26 N
ATOM 24 C4 G B 254 87.459 117.999 -2.483 1.00 55.69 C
ATOM 25 P G B 255 81.732 118.229 -1.491 1.00 59.58 P
ATOM 26 OP1 G B 255 80.276 118.494 -1.603 1.00 58.13 O
ATOM 27 OP2 G B 255 82.281 117.636 -0.248 1.00 59.88 O
ATOM 28 O5' G B 255 82.184 117.286 -2.694 1.00 59.82 O
TER
ATOM 2 P G A 237 85.194 124.912 -8.131 1.00 66.93 P
ATOM 3 OP1 G A 237 83.773 125.316 -8.295 1.00 63.81 O
ATOM 4 OP2 G A 237 86.274 125.861 -8.503 1.00 66.86 O
ATOM 5 O5' G A 237 85.429 124.501 -6.608 1.00 68.34 O
ATOM 6 C5' G A 237 84.629 123.478 -5.982 1.00 67.09 C
ATOM 7 C4' G A 237 84.716 123.594 -4.482 1.00 65.31 C
ATOM 8 O4' G A 237 86.092 123.392 -4.061 1.00 65.65 O
ATOM 9 C3' G A 237 84.354 124.954 -3.912 1.00 64.70 C
ATOM 10 O3' G A 237 82.951 125.120 -3.774 1.00 64.35 O
ATOM 11 C2' G A 237 85.065 124.937 -2.570 1.00 65.63 C
ATOM 12 O2' G A 237 84.358 124.209 -1.590 1.00 66.54 O
ATOM 13 C1' G A 237 86.363 124.206 -2.930 1.00 66.58 C
ATOM 14 N9 G A 237 87.433 125.139 -3.268 1.00 67.29 N
ATOM 15 C8 G A 237 87.937 125.419 -4.515 1.00 68.17 C
ATOM 16 N7 G A 237 88.875 126.327 -4.497 1.00 68.44 N
ATOM 17 C5 G A 237 89.004 126.664 -3.156 1.00 67.97 C
ATOM 18 C6 G A 237 89.860 127.599 -2.518 1.00 67.47 C
ATOM 19 O6 G A 237 90.700 128.351 -3.026 1.00 68.10 O
ATOM 20 N1 G A 237 89.663 127.613 -1.142 1.00 67.27 N
ATOM 21 C2 G A 237 88.758 126.838 -0.467 1.00 66.14 C
ATOM 22 N2 G A 237 88.718 126.997 0.855 1.00 67.23 N
ATOM 23 N3 G A 237 87.952 125.972 -1.045 1.00 67.43 N
ATOM 24 C4 G A 237 88.127 125.935 -2.383 1.00 68.28 C
ATOM 25 P C A 238 82.338 126.594 -3.574 1.00 65.62 P
ATOM 26 OP1 C A 238 80.860 126.476 -3.624 1.00 64.02 O
ATOM 27 OP2 C A 238 83.030 127.528 -4.503 1.00 64.87 O
ATOM 28 O5' C A 238 82.765 126.995 -2.090 1.00 65.80 O
TER
ATOM 1 O3' U B 253 85.943 122.402 2.642 1.00 52.95 O
ATOM 2 P G B 254 84.892 121.193 2.624 1.00 54.74 P
ATOM 3 OP1 G B 254 83.579 121.759 3.040 1.00 52.56 O
ATOM 4 OP2 G B 254 85.472 120.046 3.364 1.00 53.71 O
ATOM 5 O5' G B 254 84.797 120.787 1.085 1.00 56.25 O
ATOM 6 C5' G B 254 84.151 121.661 0.134 1.00 57.72 C
ATOM 7 C4' G B 254 84.334 121.147 -1.274 1.00 57.87 C
ATOM 8 O4' G B 254 85.749 121.115 -1.603 1.00 57.26 O
ATOM 9 C3' G B 254 83.879 119.724 -1.546 1.00 57.67 C
ATOM 10 O3' G B 254 82.478 119.628 -1.753 1.00 59.05 O
ATOM 11 C2' G B 254 84.655 119.389 -2.809 1.00 56.34 C
ATOM 12 O2' G B 254 84.086 119.971 -3.964 1.00 55.30 O
ATOM 13 C1' G B 254 85.998 120.051 -2.508 1.00 55.89 C
ATOM 14 N9 G B 254 86.918 119.109 -1.883 1.00 55.29 N
ATOM 15 C8 G B 254 87.407 119.137 -0.602 1.00 54.54 C
ATOM 16 N7 G B 254 88.205 118.139 -0.341 1.00 55.09 N
ATOM 17 C5 G B 254 88.242 117.408 -1.519 1.00 55.21 C
ATOM 18 C6 G B 254 88.931 116.206 -1.840 1.00 56.54 C
ATOM 19 O6 G B 254 89.656 115.512 -1.113 1.00 57.87 O
ATOM 20 N1 G B 254 88.698 115.821 -3.155 1.00 56.44 N
ATOM 21 C2 G B 254 87.892 116.492 -4.045 1.00 57.24 C
ATOM 22 N2 G B 254 87.781 115.961 -5.272 1.00 56.85 N
ATOM 23 N3 G B 254 87.238 117.602 -3.753 1.00 56.26 N
ATOM 24 C4 G B 254 87.459 117.999 -2.483 1.00 55.69 C
ATOM 25 P G B 255 81.732 118.229 -1.491 1.00 59.58 P
ATOM 26 OP1 G B 255 80.276 118.494 -1.603 1.00 58.13 O
ATOM 27 OP2 G B 255 82.281 117.636 -0.248 1.00 59.88 O
ATOM 28 O5' G B 255 82.184 117.286 -2.694 1.00 59.82 O
TER
Atoms:
OP1: (83.773,125.316,-8.295)
OP2: (86.274,125.861,-8.503)
C3': (84.354,124.954,-3.912)
C1': (86.363,124.206,-2.930)
C5': (84.629,123.478,-5.982)
O6: (90.700,128.351,-3.026)
O4': (86.092,123.392,-4.061)
C8: (87.937,125.419,-4.515)
C2: (88.758,126.838,-0.467)
C6: (89.860,127.599,-2.518)
C5: (89.004,126.664,-3.156)
C4: (88.127,125.935,-2.383)
P: (85.194,124.912,-8.131)
C4': (84.716,123.594,-4.482)
C2': (85.065,124.937,-2.570)
O2': (84.358,124.209,-1.590)
N1: (89.663,127.613,-1.142)
N2: (88.718,126.997,0.855)
N3: (87.952,125.972,-1.045)
N7: (88.875,126.327,-4.497)
N9: (87.433,125.139,-3.268)
O5': (85.429,124.501,-6.608)
O3': (82.951,125.120,-3.774)
OP2: (86.274,125.861,-8.503)
C3': (84.354,124.954,-3.912)
C1': (86.363,124.206,-2.930)
C5': (84.629,123.478,-5.982)
O6: (90.700,128.351,-3.026)
O4': (86.092,123.392,-4.061)
C8: (87.937,125.419,-4.515)
C2: (88.758,126.838,-0.467)
C6: (89.860,127.599,-2.518)
C5: (89.004,126.664,-3.156)
C4: (88.127,125.935,-2.383)
P: (85.194,124.912,-8.131)
C4': (84.716,123.594,-4.482)
C2': (85.065,124.937,-2.570)
O2': (84.358,124.209,-1.590)
N1: (89.663,127.613,-1.142)
N2: (88.718,126.997,0.855)
N3: (87.952,125.972,-1.045)
N7: (88.875,126.327,-4.497)
N9: (87.433,125.139,-3.268)
O5': (85.429,124.501,-6.608)
O3': (82.951,125.120,-3.774)
OP1: (83.579,121.759,3.040)
OP2: (85.472,120.046,3.364)
C3': (83.879,119.724,-1.546)
C1': (85.998,120.051,-2.508)
C5': (84.151,121.661,0.134)
O6: (89.656,115.512,-1.113)
O4': (85.749,121.115,-1.603)
C8: (87.407,119.137,-0.602)
C2: (87.892,116.492,-4.045)
C6: (88.931,116.206,-1.840)
C5: (88.242,117.408,-1.519)
C4: (87.459,117.999,-2.483)
P: (84.892,121.193,2.624)
C4': (84.334,121.147,-1.274)
C2': (84.655,119.389,-2.809)
O2': (84.086,119.971,-3.964)
N1: (88.698,115.821,-3.155)
N2: (87.781,115.961,-5.272)
N3: (87.238,117.602,-3.753)
N7: (88.205,118.139,-0.341)
N9: (86.918,119.109,-1.883)
O5': (84.797,120.787,1.085)
O3': (82.478,119.628,-1.753)
OP2: (85.472,120.046,3.364)
C3': (83.879,119.724,-1.546)
C1': (85.998,120.051,-2.508)
C5': (84.151,121.661,0.134)
O6: (89.656,115.512,-1.113)
O4': (85.749,121.115,-1.603)
C8: (87.407,119.137,-0.602)
C2: (87.892,116.492,-4.045)
C6: (88.931,116.206,-1.840)
C5: (88.242,117.408,-1.519)
C4: (87.459,117.999,-2.483)
P: (84.892,121.193,2.624)
C4': (84.334,121.147,-1.274)
C2': (84.655,119.389,-2.809)
O2': (84.086,119.971,-3.964)
N1: (88.698,115.821,-3.155)
N2: (87.781,115.961,-5.272)
N3: (87.238,117.602,-3.753)
N7: (88.205,118.139,-0.341)
N9: (86.918,119.109,-1.883)
O5': (84.797,120.787,1.085)
O3': (82.478,119.628,-1.753)
Image (generated by PyMOL):