ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:0179:0224

Extra

PDB:
ATOM 1 O3' G A 178 71.440 105.173 19.229 1.00 39.45 O
ATOM 2 P A A 179 72.803 105.229 18.390 1.00 43.03 P
ATOM 3 OP1 A A 179 73.360 103.852 18.339 1.00 42.34 O
ATOM 4 OP2 A A 179 73.643 106.331 18.931 1.00 44.52 O
ATOM 5 O5' A A 179 72.297 105.641 16.934 1.00 45.18 O
ATOM 6 C5' A A 179 72.819 105.009 15.740 1.00 44.56 C
ATOM 7 C4' A A 179 71.969 103.808 15.372 1.00 43.72 C
ATOM 8 O4' A A 179 70.598 104.039 15.794 1.00 42.06 O
ATOM 9 C3' A A 179 71.910 103.495 13.882 1.00 43.06 C
ATOM 10 O3' A A 179 71.677 102.110 13.646 1.00 42.16 O
ATOM 11 C2' A A 179 70.690 104.295 13.450 1.00 42.70 C
ATOM 12 O2' A A 179 70.091 103.815 12.269 1.00 44.34 O
ATOM 13 C1' A A 179 69.764 104.138 14.660 1.00 40.98 C
ATOM 14 N9 A A 179 68.954 105.337 14.814 1.00 38.38 N
ATOM 15 C8 A A 179 69.326 106.531 15.377 1.00 38.25 C
ATOM 16 N7 A A 179 68.415 107.467 15.276 1.00 39.75 N
ATOM 17 C5 A A 179 67.366 106.839 14.623 1.00 38.65 C
ATOM 18 C6 A A 179 66.115 107.297 14.193 1.00 38.25 C
ATOM 19 N6 A A 179 65.692 108.554 14.342 1.00 35.72 N
ATOM 20 N1 A A 179 65.301 106.407 13.583 1.00 41.07 N
ATOM 21 C2 A A 179 65.733 105.150 13.408 1.00 39.37 C
ATOM 22 N3 A A 179 66.896 104.607 13.753 1.00 39.17 N
ATOM 23 C4 A A 179 67.675 105.516 14.362 1.00 38.63 C
ATOM 24 P A A 180 72.917 101.098 13.556 1.00 44.34 P
ATOM 25 OP1 A A 180 74.091 101.843 13.025 1.00 46.36 O
ATOM 26 OP2 A A 180 72.468 99.856 12.872 1.00 45.10 O
ATOM 27 O5' A A 180 73.214 100.760 15.083 1.00 43.61 O
TER

ATOM 1 O3' C B 223 58.199 108.633 12.123 1.00 47.83 O
ATOM 2 P A B 224 58.317 108.159 10.595 1.00 47.74 P
ATOM 3 OP1 A B 224 58.927 109.258 9.804 1.00 49.30 O
ATOM 4 OP2 A B 224 56.981 107.628 10.210 1.00 45.96 O
ATOM 5 O5' A B 224 59.363 106.965 10.690 1.00 44.02 O
ATOM 6 C5' A B 224 60.085 106.501 9.550 1.00 44.05 C
ATOM 7 C4' A B 224 61.555 106.435 9.877 1.00 45.37 C
ATOM 8 O4' A B 224 62.113 107.773 9.804 1.00 45.63 O
ATOM 9 C3' A B 224 61.880 105.911 11.274 1.00 45.85 C
ATOM 10 O3' A B 224 63.146 105.248 11.286 1.00 46.68 O
ATOM 11 C2' A B 224 62.002 107.210 12.068 1.00 45.95 C
ATOM 12 O2' A B 224 62.800 107.098 13.225 1.00 47.95 O
ATOM 13 C1' A B 224 62.686 108.109 11.046 1.00 45.32 C
ATOM 14 N9 A B 224 62.523 109.546 11.247 1.00 43.46 N
ATOM 15 C8 A B 224 61.396 110.314 11.080 1.00 43.08 C
ATOM 16 N7 A B 224 61.595 111.594 11.281 1.00 41.62 N
ATOM 17 C5 A B 224 62.940 111.672 11.614 1.00 40.95 C
ATOM 18 C6 A B 224 63.766 112.753 11.932 1.00 41.16 C
ATOM 19 N6 A B 224 63.340 114.017 11.962 1.00 42.13 N
ATOM 20 N1 A B 224 65.063 112.492 12.222 1.00 40.79 N
ATOM 21 C2 A B 224 65.484 111.222 12.192 1.00 40.83 C
ATOM 22 N3 A B 224 64.801 110.119 11.905 1.00 41.81 N
ATOM 23 C4 A B 224 63.519 110.417 11.616 1.00 42.05 C
ATOM 24 P G B 225 63.340 103.844 10.517 1.00 48.55 P
ATOM 25 OP1 G B 225 62.062 103.551 9.814 1.00 45.24 O
ATOM 26 OP2 G B 225 63.916 102.830 11.440 1.00 47.75 O
ATOM 27 O5' G B 225 64.469 104.202 9.446 1.00 49.18 O
TER

Atoms:
OP1: (73.360,103.852,18.339)
OP2: (73.643,106.331,18.931)
C3': (71.910,103.495,13.882)
C1': (69.764,104.138,14.660)
C5': (72.819,105.009,15.740)
O4': (70.598,104.039,15.794)
C8: (69.326,106.531,15.377)
O2': (70.091,103.815,12.269)
C6: (66.115,107.297,14.193)
C5: (67.366,106.839,14.623)
C4: (67.675,105.516,14.362)
P: (72.803,105.229,18.390)
C4': (71.969,103.808,15.372)
C2': (70.690,104.295,13.450)
C2: (65.733,105.150,13.408)
N1: (65.301,106.407,13.583)
N3: (66.896,104.607,13.753)
N6: (65.692,108.554,14.342)
N7: (68.415,107.467,15.276)
N9: (68.954,105.337,14.814)
O5': (72.297,105.641,16.934)
O3': (71.677,102.110,13.646)
OP1: (58.927,109.258,9.804)
OP2: (56.981,107.628,10.210)
C3': (61.880,105.911,11.274)
C1': (62.686,108.109,11.046)
C5': (60.085,106.501,9.550)
O4': (62.113,107.773,9.804)
C8: (61.396,110.314,11.080)
O2': (62.800,107.098,13.225)
C6: (63.766,112.753,11.932)
C5: (62.940,111.672,11.614)
C4: (63.519,110.417,11.616)
P: (58.317,108.159,10.595)
C4': (61.555,106.435,9.877)
C2': (62.002,107.210,12.068)
C2: (65.484,111.222,12.192)
N1: (65.063,112.492,12.222)
N3: (64.801,110.119,11.905)
N6: (63.340,114.017,11.962)
N7: (61.595,111.594,11.281)
N9: (62.523,109.546,11.247)
O5': (59.363,106.965,10.690)
O3': (63.146,105.248,11.286)
Image (generated by PyMOL):
PyMOL image
show in jmol