Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02682:02677
Extra
PDB:
ATOM 1 O3' G A2681 36.783 161.470 111.307 1.00 38.31 O
ATOM 2 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 3 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 4 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 5 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
ATOM 6 C5' A A2682 36.018 160.242 114.127 1.00 38.61 C
ATOM 7 C4' A A2682 36.690 159.440 115.218 1.00 41.59 C
ATOM 8 O4' A A2682 38.094 159.247 114.881 1.00 41.58 O
ATOM 9 C3' A A2682 36.745 160.111 116.580 1.00 41.96 C
ATOM 10 O3' A A2682 35.541 159.942 117.299 1.00 42.12 O
ATOM 11 C2' A A2682 37.913 159.397 117.236 1.00 40.77 C
ATOM 12 O2' A A2682 37.579 158.095 117.657 1.00 40.52 O
ATOM 13 C1' A A2682 38.885 159.310 116.062 1.00 40.98 C
ATOM 14 N9 A A2682 39.709 160.517 115.999 1.00 39.44 N
ATOM 15 C8 A A2682 39.681 161.517 115.059 1.00 38.60 C
ATOM 16 N7 A A2682 40.525 162.490 115.300 1.00 39.81 N
ATOM 17 C5 A A2682 41.155 162.103 116.478 1.00 39.64 C
ATOM 18 C6 A A2682 42.151 162.711 117.269 1.00 38.79 C
ATOM 19 N6 A A2682 42.704 163.892 116.992 1.00 40.77 N
ATOM 20 N1 A A2682 42.561 162.055 118.374 1.00 37.76 N
ATOM 21 C2 A A2682 42.001 160.878 118.663 1.00 37.93 C
ATOM 22 N3 A A2682 41.056 160.210 118.006 1.00 38.84 N
ATOM 23 C4 A A2682 40.670 160.885 116.910 1.00 39.04 C
ATOM 24 P C A2683 35.043 161.099 118.289 1.00 42.47 P
ATOM 25 OP1 C A2683 33.863 160.523 118.989 1.00 41.02 O
ATOM 26 OP2 C A2683 34.902 162.363 117.519 1.00 41.43 O
ATOM 27 O5' C A2683 36.251 161.303 119.312 1.00 40.84 O
TER
ATOM 1 O3' U B2676 47.358 165.332 126.380 1.00 42.19 O
ATOM 2 P A B2677 48.164 164.311 125.450 1.00 39.28 P
ATOM 3 OP1 A B2677 48.299 163.058 126.232 1.00 38.92 O
ATOM 4 OP2 A B2677 49.379 164.973 124.917 1.00 39.04 O
ATOM 5 O5' A B2677 47.166 164.071 124.237 1.00 40.06 O
ATOM 6 C5' A B2677 46.033 163.215 124.393 1.00 39.28 C
ATOM 7 C4' A B2677 45.365 162.984 123.064 1.00 40.43 C
ATOM 8 O4' A B2677 44.720 164.202 122.614 1.00 40.39 O
ATOM 9 C3' A B2677 46.253 162.595 121.892 1.00 38.52 C
ATOM 10 O3' A B2677 46.595 161.216 121.932 1.00 39.80 O
ATOM 11 C2' A B2677 45.339 162.915 120.722 1.00 38.90 C
ATOM 12 O2' A B2677 44.307 161.956 120.606 1.00 39.53 O
ATOM 13 C1' A B2677 44.710 164.227 121.194 1.00 39.54 C
ATOM 14 N9 A B2677 45.470 165.393 120.754 1.00 38.67 N
ATOM 15 C8 A B2677 46.406 166.092 121.471 1.00 39.72 C
ATOM 16 N7 A B2677 46.945 167.085 120.809 1.00 40.06 N
ATOM 17 C5 A B2677 46.316 167.043 119.577 1.00 38.85 C
ATOM 18 C6 A B2677 46.447 167.836 118.439 1.00 39.01 C
ATOM 19 N6 A B2677 47.285 168.870 118.369 1.00 39.94 N
ATOM 20 N1 A B2677 45.680 167.533 117.364 1.00 39.82 N
ATOM 21 C2 A B2677 44.835 166.498 117.454 1.00 39.52 C
ATOM 22 N3 A B2677 44.618 165.677 118.481 1.00 40.63 N
ATOM 23 C4 A B2677 45.402 166.008 119.526 1.00 39.51 C
ATOM 24 P C B2678 47.935 160.696 121.207 1.00 38.52 P
ATOM 25 OP1 C B2678 48.053 159.254 121.543 1.00 39.64 O
ATOM 26 OP2 C B2678 49.059 161.611 121.517 1.00 39.31 O
ATOM 27 O5' C B2678 47.608 160.829 119.656 1.00 38.63 O
TER
ATOM 2 P A A2682 36.428 162.362 112.609 1.00 39.43 P
ATOM 3 OP1 A A2682 34.954 162.585 112.589 1.00 38.80 O
ATOM 4 OP2 A A2682 37.354 163.524 112.636 1.00 37.48 O
ATOM 5 O5' A A2682 36.761 161.443 113.868 1.00 37.39 O
ATOM 6 C5' A A2682 36.018 160.242 114.127 1.00 38.61 C
ATOM 7 C4' A A2682 36.690 159.440 115.218 1.00 41.59 C
ATOM 8 O4' A A2682 38.094 159.247 114.881 1.00 41.58 O
ATOM 9 C3' A A2682 36.745 160.111 116.580 1.00 41.96 C
ATOM 10 O3' A A2682 35.541 159.942 117.299 1.00 42.12 O
ATOM 11 C2' A A2682 37.913 159.397 117.236 1.00 40.77 C
ATOM 12 O2' A A2682 37.579 158.095 117.657 1.00 40.52 O
ATOM 13 C1' A A2682 38.885 159.310 116.062 1.00 40.98 C
ATOM 14 N9 A A2682 39.709 160.517 115.999 1.00 39.44 N
ATOM 15 C8 A A2682 39.681 161.517 115.059 1.00 38.60 C
ATOM 16 N7 A A2682 40.525 162.490 115.300 1.00 39.81 N
ATOM 17 C5 A A2682 41.155 162.103 116.478 1.00 39.64 C
ATOM 18 C6 A A2682 42.151 162.711 117.269 1.00 38.79 C
ATOM 19 N6 A A2682 42.704 163.892 116.992 1.00 40.77 N
ATOM 20 N1 A A2682 42.561 162.055 118.374 1.00 37.76 N
ATOM 21 C2 A A2682 42.001 160.878 118.663 1.00 37.93 C
ATOM 22 N3 A A2682 41.056 160.210 118.006 1.00 38.84 N
ATOM 23 C4 A A2682 40.670 160.885 116.910 1.00 39.04 C
ATOM 24 P C A2683 35.043 161.099 118.289 1.00 42.47 P
ATOM 25 OP1 C A2683 33.863 160.523 118.989 1.00 41.02 O
ATOM 26 OP2 C A2683 34.902 162.363 117.519 1.00 41.43 O
ATOM 27 O5' C A2683 36.251 161.303 119.312 1.00 40.84 O
TER
ATOM 1 O3' U B2676 47.358 165.332 126.380 1.00 42.19 O
ATOM 2 P A B2677 48.164 164.311 125.450 1.00 39.28 P
ATOM 3 OP1 A B2677 48.299 163.058 126.232 1.00 38.92 O
ATOM 4 OP2 A B2677 49.379 164.973 124.917 1.00 39.04 O
ATOM 5 O5' A B2677 47.166 164.071 124.237 1.00 40.06 O
ATOM 6 C5' A B2677 46.033 163.215 124.393 1.00 39.28 C
ATOM 7 C4' A B2677 45.365 162.984 123.064 1.00 40.43 C
ATOM 8 O4' A B2677 44.720 164.202 122.614 1.00 40.39 O
ATOM 9 C3' A B2677 46.253 162.595 121.892 1.00 38.52 C
ATOM 10 O3' A B2677 46.595 161.216 121.932 1.00 39.80 O
ATOM 11 C2' A B2677 45.339 162.915 120.722 1.00 38.90 C
ATOM 12 O2' A B2677 44.307 161.956 120.606 1.00 39.53 O
ATOM 13 C1' A B2677 44.710 164.227 121.194 1.00 39.54 C
ATOM 14 N9 A B2677 45.470 165.393 120.754 1.00 38.67 N
ATOM 15 C8 A B2677 46.406 166.092 121.471 1.00 39.72 C
ATOM 16 N7 A B2677 46.945 167.085 120.809 1.00 40.06 N
ATOM 17 C5 A B2677 46.316 167.043 119.577 1.00 38.85 C
ATOM 18 C6 A B2677 46.447 167.836 118.439 1.00 39.01 C
ATOM 19 N6 A B2677 47.285 168.870 118.369 1.00 39.94 N
ATOM 20 N1 A B2677 45.680 167.533 117.364 1.00 39.82 N
ATOM 21 C2 A B2677 44.835 166.498 117.454 1.00 39.52 C
ATOM 22 N3 A B2677 44.618 165.677 118.481 1.00 40.63 N
ATOM 23 C4 A B2677 45.402 166.008 119.526 1.00 39.51 C
ATOM 24 P C B2678 47.935 160.696 121.207 1.00 38.52 P
ATOM 25 OP1 C B2678 48.053 159.254 121.543 1.00 39.64 O
ATOM 26 OP2 C B2678 49.059 161.611 121.517 1.00 39.31 O
ATOM 27 O5' C B2678 47.608 160.829 119.656 1.00 38.63 O
TER
Atoms:
OP1: (34.954,162.585,112.589)
OP2: (37.354,163.524,112.636)
C3': (36.745,160.111,116.580)
C1': (38.885,159.310,116.062)
C5': (36.018,160.242,114.127)
O4': (38.094,159.247,114.881)
C8: (39.681,161.517,115.059)
O2': (37.579,158.095,117.657)
C6: (42.151,162.711,117.269)
C5: (41.155,162.103,116.478)
C4: (40.670,160.885,116.910)
P: (36.428,162.362,112.609)
C4': (36.690,159.440,115.218)
C2': (37.913,159.397,117.236)
C2: (42.001,160.878,118.663)
N1: (42.561,162.055,118.374)
N3: (41.056,160.210,118.006)
N6: (42.704,163.892,116.992)
N7: (40.525,162.490,115.300)
N9: (39.709,160.517,115.999)
O5': (36.761,161.443,113.868)
O3': (35.541,159.942,117.299)
OP2: (37.354,163.524,112.636)
C3': (36.745,160.111,116.580)
C1': (38.885,159.310,116.062)
C5': (36.018,160.242,114.127)
O4': (38.094,159.247,114.881)
C8: (39.681,161.517,115.059)
O2': (37.579,158.095,117.657)
C6: (42.151,162.711,117.269)
C5: (41.155,162.103,116.478)
C4: (40.670,160.885,116.910)
P: (36.428,162.362,112.609)
C4': (36.690,159.440,115.218)
C2': (37.913,159.397,117.236)
C2: (42.001,160.878,118.663)
N1: (42.561,162.055,118.374)
N3: (41.056,160.210,118.006)
N6: (42.704,163.892,116.992)
N7: (40.525,162.490,115.300)
N9: (39.709,160.517,115.999)
O5': (36.761,161.443,113.868)
O3': (35.541,159.942,117.299)
OP1: (48.299,163.058,126.232)
OP2: (49.379,164.973,124.917)
C3': (46.253,162.595,121.892)
C1': (44.710,164.227,121.194)
C5': (46.033,163.215,124.393)
O4': (44.720,164.202,122.614)
C8: (46.406,166.092,121.471)
O2': (44.307,161.956,120.606)
C6: (46.447,167.836,118.439)
C5: (46.316,167.043,119.577)
C4: (45.402,166.008,119.526)
P: (48.164,164.311,125.450)
C4': (45.365,162.984,123.064)
C2': (45.339,162.915,120.722)
C2: (44.835,166.498,117.454)
N1: (45.680,167.533,117.364)
N3: (44.618,165.677,118.481)
N6: (47.285,168.870,118.369)
N7: (46.945,167.085,120.809)
N9: (45.470,165.393,120.754)
O5': (47.166,164.071,124.237)
O3': (46.595,161.216,121.932)
OP2: (49.379,164.973,124.917)
C3': (46.253,162.595,121.892)
C1': (44.710,164.227,121.194)
C5': (46.033,163.215,124.393)
O4': (44.720,164.202,122.614)
C8: (46.406,166.092,121.471)
O2': (44.307,161.956,120.606)
C6: (46.447,167.836,118.439)
C5: (46.316,167.043,119.577)
C4: (45.402,166.008,119.526)
P: (48.164,164.311,125.450)
C4': (45.365,162.984,123.064)
C2': (45.339,162.915,120.722)
C2: (44.835,166.498,117.454)
N1: (45.680,167.533,117.364)
N3: (44.618,165.677,118.481)
N6: (47.285,168.870,118.369)
N7: (46.945,167.085,120.809)
N9: (45.470,165.393,120.754)
O5': (47.166,164.071,124.237)
O3': (46.595,161.216,121.932)
Image (generated by PyMOL):