Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 84.941 122.378 -9.413 1.00 56.20 O
ATOM 2 P G A 237 84.781 123.796 -8.664 1.00 60.19 P
ATOM 3 OP1 G A 237 83.374 124.250 -8.853 1.00 57.62 O
ATOM 4 OP2 G A 237 85.902 124.679 -9.087 1.00 58.64 O
ATOM 5 O5' G A 237 84.986 123.454 -7.120 1.00 60.54 O
ATOM 6 C5' G A 237 84.164 122.472 -6.461 1.00 58.43 C
ATOM 7 C4' G A 237 84.291 122.610 -4.965 1.00 58.01 C
ATOM 8 O4' G A 237 85.677 122.406 -4.574 1.00 58.81 O
ATOM 9 C3' G A 237 83.946 123.980 -4.400 1.00 56.68 C
ATOM 10 O3' G A 237 82.536 124.119 -4.232 1.00 55.14 O
ATOM 11 C2' G A 237 84.694 123.974 -3.074 1.00 57.50 C
ATOM 12 O2' G A 237 84.013 123.247 -2.073 1.00 59.35 O
ATOM 13 C1' G A 237 85.974 123.218 -3.447 1.00 58.40 C
ATOM 14 N9 G A 237 87.092 124.101 -3.773 1.00 58.24 N
ATOM 15 C8 G A 237 87.671 124.306 -5.003 1.00 59.37 C
ATOM 16 N7 G A 237 88.640 125.183 -4.974 1.00 59.32 N
ATOM 17 C5 G A 237 88.708 125.578 -3.644 1.00 59.01 C
ATOM 18 C6 G A 237 89.561 126.517 -3.001 1.00 59.02 C
ATOM 19 O6 G A 237 90.452 127.223 -3.497 1.00 59.31 O
ATOM 20 N1 G A 237 89.295 126.598 -1.640 1.00 58.51 N
ATOM 21 C2 G A 237 88.336 125.879 -0.980 1.00 59.44 C
ATOM 22 N2 G A 237 88.240 126.086 0.338 1.00 60.00 N
ATOM 23 N3 G A 237 87.528 125.014 -1.565 1.00 60.65 N
ATOM 24 C4 G A 237 87.768 124.912 -2.888 1.00 59.39 C
ATOM 25 P C A 238 81.895 125.573 -3.966 1.00 56.20 P
ATOM 26 OP1 C A 238 80.417 125.418 -3.968 1.00 56.38 O
ATOM 27 OP2 C A 238 82.526 126.557 -4.878 1.00 56.51 O
ATOM 28 O5' C A 238 82.339 125.928 -2.477 1.00 57.25 O
TER
ATOM 1 O3' U B 253 85.539 121.454 2.054 1.00 46.15 O
ATOM 2 P G B 254 84.443 120.282 2.056 1.00 47.38 P
ATOM 3 OP1 G B 254 83.152 120.894 2.499 1.00 46.32 O
ATOM 4 OP2 G B 254 85.018 119.131 2.806 1.00 46.64 O
ATOM 5 O5' G B 254 84.319 119.850 0.524 1.00 48.74 O
ATOM 6 C5' G B 254 83.719 120.730 -0.445 1.00 51.46 C
ATOM 7 C4' G B 254 83.913 120.195 -1.847 1.00 52.42 C
ATOM 8 O4' G B 254 85.330 120.150 -2.173 1.00 52.57 O
ATOM 9 C3' G B 254 83.444 118.774 -2.108 1.00 53.11 C
ATOM 10 O3' G B 254 82.040 118.698 -2.318 1.00 54.61 O
ATOM 11 C2' G B 254 84.225 118.421 -3.364 1.00 52.60 C
ATOM 12 O2' G B 254 83.679 119.020 -4.523 1.00 53.33 O
ATOM 13 C1' G B 254 85.578 119.065 -3.055 1.00 51.69 C
ATOM 14 N9 G B 254 86.478 118.124 -2.395 1.00 51.08 N
ATOM 15 C8 G B 254 86.932 118.168 -1.098 1.00 51.23 C
ATOM 16 N7 G B 254 87.705 117.163 -0.790 1.00 49.51 N
ATOM 17 C5 G B 254 87.771 116.410 -1.954 1.00 50.46 C
ATOM 18 C6 G B 254 88.455 115.201 -2.225 1.00 51.01 C
ATOM 19 O6 G B 254 89.154 114.521 -1.461 1.00 52.33 O
ATOM 20 N1 G B 254 88.258 114.787 -3.538 1.00 52.06 N
ATOM 21 C2 G B 254 87.493 115.447 -4.470 1.00 51.72 C
ATOM 22 N2 G B 254 87.419 114.885 -5.684 1.00 52.55 N
ATOM 23 N3 G B 254 86.845 116.572 -4.228 1.00 51.24 N
ATOM 24 C4 G B 254 87.027 116.994 -2.957 1.00 51.09 C
ATOM 25 P G B 255 81.276 117.301 -2.083 1.00 55.34 P
ATOM 26 OP1 G B 255 79.830 117.557 -2.324 1.00 54.96 O
ATOM 27 OP2 G B 255 81.721 116.721 -0.784 1.00 55.81 O
ATOM 28 O5' G B 255 81.829 116.356 -3.241 1.00 55.42 O
TER
ATOM 2 P G A 237 84.781 123.796 -8.664 1.00 60.19 P
ATOM 3 OP1 G A 237 83.374 124.250 -8.853 1.00 57.62 O
ATOM 4 OP2 G A 237 85.902 124.679 -9.087 1.00 58.64 O
ATOM 5 O5' G A 237 84.986 123.454 -7.120 1.00 60.54 O
ATOM 6 C5' G A 237 84.164 122.472 -6.461 1.00 58.43 C
ATOM 7 C4' G A 237 84.291 122.610 -4.965 1.00 58.01 C
ATOM 8 O4' G A 237 85.677 122.406 -4.574 1.00 58.81 O
ATOM 9 C3' G A 237 83.946 123.980 -4.400 1.00 56.68 C
ATOM 10 O3' G A 237 82.536 124.119 -4.232 1.00 55.14 O
ATOM 11 C2' G A 237 84.694 123.974 -3.074 1.00 57.50 C
ATOM 12 O2' G A 237 84.013 123.247 -2.073 1.00 59.35 O
ATOM 13 C1' G A 237 85.974 123.218 -3.447 1.00 58.40 C
ATOM 14 N9 G A 237 87.092 124.101 -3.773 1.00 58.24 N
ATOM 15 C8 G A 237 87.671 124.306 -5.003 1.00 59.37 C
ATOM 16 N7 G A 237 88.640 125.183 -4.974 1.00 59.32 N
ATOM 17 C5 G A 237 88.708 125.578 -3.644 1.00 59.01 C
ATOM 18 C6 G A 237 89.561 126.517 -3.001 1.00 59.02 C
ATOM 19 O6 G A 237 90.452 127.223 -3.497 1.00 59.31 O
ATOM 20 N1 G A 237 89.295 126.598 -1.640 1.00 58.51 N
ATOM 21 C2 G A 237 88.336 125.879 -0.980 1.00 59.44 C
ATOM 22 N2 G A 237 88.240 126.086 0.338 1.00 60.00 N
ATOM 23 N3 G A 237 87.528 125.014 -1.565 1.00 60.65 N
ATOM 24 C4 G A 237 87.768 124.912 -2.888 1.00 59.39 C
ATOM 25 P C A 238 81.895 125.573 -3.966 1.00 56.20 P
ATOM 26 OP1 C A 238 80.417 125.418 -3.968 1.00 56.38 O
ATOM 27 OP2 C A 238 82.526 126.557 -4.878 1.00 56.51 O
ATOM 28 O5' C A 238 82.339 125.928 -2.477 1.00 57.25 O
TER
ATOM 1 O3' U B 253 85.539 121.454 2.054 1.00 46.15 O
ATOM 2 P G B 254 84.443 120.282 2.056 1.00 47.38 P
ATOM 3 OP1 G B 254 83.152 120.894 2.499 1.00 46.32 O
ATOM 4 OP2 G B 254 85.018 119.131 2.806 1.00 46.64 O
ATOM 5 O5' G B 254 84.319 119.850 0.524 1.00 48.74 O
ATOM 6 C5' G B 254 83.719 120.730 -0.445 1.00 51.46 C
ATOM 7 C4' G B 254 83.913 120.195 -1.847 1.00 52.42 C
ATOM 8 O4' G B 254 85.330 120.150 -2.173 1.00 52.57 O
ATOM 9 C3' G B 254 83.444 118.774 -2.108 1.00 53.11 C
ATOM 10 O3' G B 254 82.040 118.698 -2.318 1.00 54.61 O
ATOM 11 C2' G B 254 84.225 118.421 -3.364 1.00 52.60 C
ATOM 12 O2' G B 254 83.679 119.020 -4.523 1.00 53.33 O
ATOM 13 C1' G B 254 85.578 119.065 -3.055 1.00 51.69 C
ATOM 14 N9 G B 254 86.478 118.124 -2.395 1.00 51.08 N
ATOM 15 C8 G B 254 86.932 118.168 -1.098 1.00 51.23 C
ATOM 16 N7 G B 254 87.705 117.163 -0.790 1.00 49.51 N
ATOM 17 C5 G B 254 87.771 116.410 -1.954 1.00 50.46 C
ATOM 18 C6 G B 254 88.455 115.201 -2.225 1.00 51.01 C
ATOM 19 O6 G B 254 89.154 114.521 -1.461 1.00 52.33 O
ATOM 20 N1 G B 254 88.258 114.787 -3.538 1.00 52.06 N
ATOM 21 C2 G B 254 87.493 115.447 -4.470 1.00 51.72 C
ATOM 22 N2 G B 254 87.419 114.885 -5.684 1.00 52.55 N
ATOM 23 N3 G B 254 86.845 116.572 -4.228 1.00 51.24 N
ATOM 24 C4 G B 254 87.027 116.994 -2.957 1.00 51.09 C
ATOM 25 P G B 255 81.276 117.301 -2.083 1.00 55.34 P
ATOM 26 OP1 G B 255 79.830 117.557 -2.324 1.00 54.96 O
ATOM 27 OP2 G B 255 81.721 116.721 -0.784 1.00 55.81 O
ATOM 28 O5' G B 255 81.829 116.356 -3.241 1.00 55.42 O
TER
Atoms:
OP1: (83.374,124.250,-8.853)
OP2: (85.902,124.679,-9.087)
C3': (83.946,123.980,-4.400)
C1': (85.974,123.218,-3.447)
C5': (84.164,122.472,-6.461)
O6: (90.452,127.223,-3.497)
O4': (85.677,122.406,-4.574)
C8: (87.671,124.306,-5.003)
C2: (88.336,125.879,-0.980)
C6: (89.561,126.517,-3.001)
C5: (88.708,125.578,-3.644)
C4: (87.768,124.912,-2.888)
P: (84.781,123.796,-8.664)
C4': (84.291,122.610,-4.965)
C2': (84.694,123.974,-3.074)
O2': (84.013,123.247,-2.073)
N1: (89.295,126.598,-1.640)
N2: (88.240,126.086,0.338)
N3: (87.528,125.014,-1.565)
N7: (88.640,125.183,-4.974)
N9: (87.092,124.101,-3.773)
O5': (84.986,123.454,-7.120)
O3': (82.536,124.119,-4.232)
OP2: (85.902,124.679,-9.087)
C3': (83.946,123.980,-4.400)
C1': (85.974,123.218,-3.447)
C5': (84.164,122.472,-6.461)
O6: (90.452,127.223,-3.497)
O4': (85.677,122.406,-4.574)
C8: (87.671,124.306,-5.003)
C2: (88.336,125.879,-0.980)
C6: (89.561,126.517,-3.001)
C5: (88.708,125.578,-3.644)
C4: (87.768,124.912,-2.888)
P: (84.781,123.796,-8.664)
C4': (84.291,122.610,-4.965)
C2': (84.694,123.974,-3.074)
O2': (84.013,123.247,-2.073)
N1: (89.295,126.598,-1.640)
N2: (88.240,126.086,0.338)
N3: (87.528,125.014,-1.565)
N7: (88.640,125.183,-4.974)
N9: (87.092,124.101,-3.773)
O5': (84.986,123.454,-7.120)
O3': (82.536,124.119,-4.232)
OP1: (83.152,120.894,2.499)
OP2: (85.018,119.131,2.806)
C3': (83.444,118.774,-2.108)
C1': (85.578,119.065,-3.055)
C5': (83.719,120.730,-0.445)
O6: (89.154,114.521,-1.461)
O4': (85.330,120.150,-2.173)
C8: (86.932,118.168,-1.098)
C2: (87.493,115.447,-4.470)
C6: (88.455,115.201,-2.225)
C5: (87.771,116.410,-1.954)
C4: (87.027,116.994,-2.957)
P: (84.443,120.282,2.056)
C4': (83.913,120.195,-1.847)
C2': (84.225,118.421,-3.364)
O2': (83.679,119.020,-4.523)
N1: (88.258,114.787,-3.538)
N2: (87.419,114.885,-5.684)
N3: (86.845,116.572,-4.228)
N7: (87.705,117.163,-0.790)
N9: (86.478,118.124,-2.395)
O5': (84.319,119.850,0.524)
O3': (82.040,118.698,-2.318)
OP2: (85.018,119.131,2.806)
C3': (83.444,118.774,-2.108)
C1': (85.578,119.065,-3.055)
C5': (83.719,120.730,-0.445)
O6: (89.154,114.521,-1.461)
O4': (85.330,120.150,-2.173)
C8: (86.932,118.168,-1.098)
C2: (87.493,115.447,-4.470)
C6: (88.455,115.201,-2.225)
C5: (87.771,116.410,-1.954)
C4: (87.027,116.994,-2.957)
P: (84.443,120.282,2.056)
C4': (83.913,120.195,-1.847)
C2': (84.225,118.421,-3.364)
O2': (83.679,119.020,-4.523)
N1: (88.258,114.787,-3.538)
N2: (87.419,114.885,-5.684)
N3: (86.845,116.572,-4.228)
N7: (87.705,117.163,-0.790)
N9: (86.478,118.124,-2.395)
O5': (84.319,119.850,0.524)
O3': (82.040,118.698,-2.318)
Image (generated by PyMOL):