Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.072 122.428 -9.494 1.00 56.30 O
ATOM 2 P G A 237 84.818 123.819 -8.726 1.00 59.59 P
ATOM 3 OP1 G A 237 83.374 124.170 -8.883 1.00 56.69 O
ATOM 4 OP2 G A 237 85.865 124.782 -9.168 1.00 58.19 O
ATOM 5 O5' G A 237 85.089 123.482 -7.190 1.00 60.02 O
ATOM 6 C5' G A 237 84.287 122.513 -6.485 1.00 57.90 C
ATOM 7 C4' G A 237 84.442 122.688 -4.991 1.00 57.51 C
ATOM 8 O4' G A 237 85.832 122.491 -4.608 1.00 57.77 O
ATOM 9 C3' G A 237 84.096 124.061 -4.429 1.00 55.64 C
ATOM 10 O3' G A 237 82.681 124.188 -4.254 1.00 54.61 O
ATOM 11 C2' G A 237 84.846 124.057 -3.103 1.00 56.32 C
ATOM 12 O2' G A 237 84.167 123.339 -2.096 1.00 57.55 O
ATOM 13 C1' G A 237 86.120 123.286 -3.467 1.00 57.48 C
ATOM 14 N9 G A 237 87.254 124.158 -3.759 1.00 58.13 N
ATOM 15 C8 G A 237 87.870 124.359 -4.971 1.00 59.37 C
ATOM 16 N7 G A 237 88.835 125.240 -4.914 1.00 59.66 N
ATOM 17 C5 G A 237 88.860 125.638 -3.584 1.00 59.38 C
ATOM 18 C6 G A 237 89.684 126.586 -2.921 1.00 59.90 C
ATOM 19 O6 G A 237 90.576 127.301 -3.395 1.00 61.30 O
ATOM 20 N1 G A 237 89.380 126.669 -1.569 1.00 59.76 N
ATOM 21 C2 G A 237 88.404 125.946 -0.936 1.00 59.91 C
ATOM 22 N2 G A 237 88.261 126.163 0.376 1.00 60.25 N
ATOM 23 N3 G A 237 87.623 125.071 -1.542 1.00 60.40 N
ATOM 24 C4 G A 237 87.904 124.968 -2.856 1.00 59.22 C
ATOM 25 P C A 238 82.022 125.634 -3.965 1.00 54.56 P
ATOM 26 OP1 C A 238 80.544 125.460 -3.927 1.00 55.19 O
ATOM 27 OP2 C A 238 82.615 126.651 -4.871 1.00 55.54 O
ATOM 28 O5' C A 238 82.482 125.975 -2.481 1.00 56.44 O
TER
ATOM 1 O3' U B 253 85.628 121.551 2.087 1.00 49.16 O
ATOM 2 P G B 254 84.487 120.429 2.027 1.00 51.25 P
ATOM 3 OP1 G B 254 83.187 121.090 2.366 1.00 49.72 O
ATOM 4 OP2 G B 254 84.958 119.265 2.822 1.00 50.20 O
ATOM 5 O5' G B 254 84.458 119.980 0.496 1.00 52.28 O
ATOM 6 C5' G B 254 83.904 120.844 -0.512 1.00 54.39 C
ATOM 7 C4' G B 254 84.118 120.267 -1.896 1.00 55.36 C
ATOM 8 O4' G B 254 85.538 120.198 -2.213 1.00 53.91 O
ATOM 9 C3' G B 254 83.632 118.848 -2.145 1.00 54.90 C
ATOM 10 O3' G B 254 82.228 118.794 -2.362 1.00 56.09 O
ATOM 11 C2' G B 254 84.405 118.493 -3.405 1.00 54.53 C
ATOM 12 O2' G B 254 83.863 119.129 -4.548 1.00 54.47 O
ATOM 13 C1' G B 254 85.769 119.114 -3.097 1.00 53.40 C
ATOM 14 N9 G B 254 86.656 118.159 -2.442 1.00 52.94 N
ATOM 15 C8 G B 254 87.119 118.197 -1.149 1.00 54.31 C
ATOM 16 N7 G B 254 87.888 117.185 -0.848 1.00 53.83 N
ATOM 17 C5 G B 254 87.939 116.434 -2.013 1.00 53.76 C
ATOM 18 C6 G B 254 88.617 115.222 -2.293 1.00 54.55 C
ATOM 19 O6 G B 254 89.323 114.542 -1.537 1.00 55.76 O
ATOM 20 N1 G B 254 88.403 114.807 -3.605 1.00 54.39 N
ATOM 21 C2 G B 254 87.626 115.470 -4.526 1.00 54.28 C
ATOM 22 N2 G B 254 87.527 114.905 -5.736 1.00 54.38 N
ATOM 23 N3 G B 254 86.988 116.601 -4.276 1.00 53.97 N
ATOM 24 C4 G B 254 87.188 117.023 -3.009 1.00 53.58 C
ATOM 25 P G B 255 81.448 117.398 -2.182 1.00 56.29 P
ATOM 26 OP1 G B 255 80.007 117.677 -2.458 1.00 55.75 O
ATOM 27 OP2 G B 255 81.852 116.782 -0.887 1.00 55.84 O
ATOM 28 O5' G B 255 82.016 116.474 -3.350 1.00 57.13 O
TER
ATOM 2 P G A 237 84.818 123.819 -8.726 1.00 59.59 P
ATOM 3 OP1 G A 237 83.374 124.170 -8.883 1.00 56.69 O
ATOM 4 OP2 G A 237 85.865 124.782 -9.168 1.00 58.19 O
ATOM 5 O5' G A 237 85.089 123.482 -7.190 1.00 60.02 O
ATOM 6 C5' G A 237 84.287 122.513 -6.485 1.00 57.90 C
ATOM 7 C4' G A 237 84.442 122.688 -4.991 1.00 57.51 C
ATOM 8 O4' G A 237 85.832 122.491 -4.608 1.00 57.77 O
ATOM 9 C3' G A 237 84.096 124.061 -4.429 1.00 55.64 C
ATOM 10 O3' G A 237 82.681 124.188 -4.254 1.00 54.61 O
ATOM 11 C2' G A 237 84.846 124.057 -3.103 1.00 56.32 C
ATOM 12 O2' G A 237 84.167 123.339 -2.096 1.00 57.55 O
ATOM 13 C1' G A 237 86.120 123.286 -3.467 1.00 57.48 C
ATOM 14 N9 G A 237 87.254 124.158 -3.759 1.00 58.13 N
ATOM 15 C8 G A 237 87.870 124.359 -4.971 1.00 59.37 C
ATOM 16 N7 G A 237 88.835 125.240 -4.914 1.00 59.66 N
ATOM 17 C5 G A 237 88.860 125.638 -3.584 1.00 59.38 C
ATOM 18 C6 G A 237 89.684 126.586 -2.921 1.00 59.90 C
ATOM 19 O6 G A 237 90.576 127.301 -3.395 1.00 61.30 O
ATOM 20 N1 G A 237 89.380 126.669 -1.569 1.00 59.76 N
ATOM 21 C2 G A 237 88.404 125.946 -0.936 1.00 59.91 C
ATOM 22 N2 G A 237 88.261 126.163 0.376 1.00 60.25 N
ATOM 23 N3 G A 237 87.623 125.071 -1.542 1.00 60.40 N
ATOM 24 C4 G A 237 87.904 124.968 -2.856 1.00 59.22 C
ATOM 25 P C A 238 82.022 125.634 -3.965 1.00 54.56 P
ATOM 26 OP1 C A 238 80.544 125.460 -3.927 1.00 55.19 O
ATOM 27 OP2 C A 238 82.615 126.651 -4.871 1.00 55.54 O
ATOM 28 O5' C A 238 82.482 125.975 -2.481 1.00 56.44 O
TER
ATOM 1 O3' U B 253 85.628 121.551 2.087 1.00 49.16 O
ATOM 2 P G B 254 84.487 120.429 2.027 1.00 51.25 P
ATOM 3 OP1 G B 254 83.187 121.090 2.366 1.00 49.72 O
ATOM 4 OP2 G B 254 84.958 119.265 2.822 1.00 50.20 O
ATOM 5 O5' G B 254 84.458 119.980 0.496 1.00 52.28 O
ATOM 6 C5' G B 254 83.904 120.844 -0.512 1.00 54.39 C
ATOM 7 C4' G B 254 84.118 120.267 -1.896 1.00 55.36 C
ATOM 8 O4' G B 254 85.538 120.198 -2.213 1.00 53.91 O
ATOM 9 C3' G B 254 83.632 118.848 -2.145 1.00 54.90 C
ATOM 10 O3' G B 254 82.228 118.794 -2.362 1.00 56.09 O
ATOM 11 C2' G B 254 84.405 118.493 -3.405 1.00 54.53 C
ATOM 12 O2' G B 254 83.863 119.129 -4.548 1.00 54.47 O
ATOM 13 C1' G B 254 85.769 119.114 -3.097 1.00 53.40 C
ATOM 14 N9 G B 254 86.656 118.159 -2.442 1.00 52.94 N
ATOM 15 C8 G B 254 87.119 118.197 -1.149 1.00 54.31 C
ATOM 16 N7 G B 254 87.888 117.185 -0.848 1.00 53.83 N
ATOM 17 C5 G B 254 87.939 116.434 -2.013 1.00 53.76 C
ATOM 18 C6 G B 254 88.617 115.222 -2.293 1.00 54.55 C
ATOM 19 O6 G B 254 89.323 114.542 -1.537 1.00 55.76 O
ATOM 20 N1 G B 254 88.403 114.807 -3.605 1.00 54.39 N
ATOM 21 C2 G B 254 87.626 115.470 -4.526 1.00 54.28 C
ATOM 22 N2 G B 254 87.527 114.905 -5.736 1.00 54.38 N
ATOM 23 N3 G B 254 86.988 116.601 -4.276 1.00 53.97 N
ATOM 24 C4 G B 254 87.188 117.023 -3.009 1.00 53.58 C
ATOM 25 P G B 255 81.448 117.398 -2.182 1.00 56.29 P
ATOM 26 OP1 G B 255 80.007 117.677 -2.458 1.00 55.75 O
ATOM 27 OP2 G B 255 81.852 116.782 -0.887 1.00 55.84 O
ATOM 28 O5' G B 255 82.016 116.474 -3.350 1.00 57.13 O
TER
Atoms:
OP1: (83.374,124.170,-8.883)
OP2: (85.865,124.782,-9.168)
C3': (84.096,124.061,-4.429)
C1': (86.120,123.286,-3.467)
C5': (84.287,122.513,-6.485)
O6: (90.576,127.301,-3.395)
O4': (85.832,122.491,-4.608)
C8: (87.870,124.359,-4.971)
C2: (88.404,125.946,-0.936)
C6: (89.684,126.586,-2.921)
C5: (88.860,125.638,-3.584)
C4: (87.904,124.968,-2.856)
P: (84.818,123.819,-8.726)
C4': (84.442,122.688,-4.991)
C2': (84.846,124.057,-3.103)
O2': (84.167,123.339,-2.096)
N1: (89.380,126.669,-1.569)
N2: (88.261,126.163,0.376)
N3: (87.623,125.071,-1.542)
N7: (88.835,125.240,-4.914)
N9: (87.254,124.158,-3.759)
O5': (85.089,123.482,-7.190)
O3': (82.681,124.188,-4.254)
OP2: (85.865,124.782,-9.168)
C3': (84.096,124.061,-4.429)
C1': (86.120,123.286,-3.467)
C5': (84.287,122.513,-6.485)
O6: (90.576,127.301,-3.395)
O4': (85.832,122.491,-4.608)
C8: (87.870,124.359,-4.971)
C2: (88.404,125.946,-0.936)
C6: (89.684,126.586,-2.921)
C5: (88.860,125.638,-3.584)
C4: (87.904,124.968,-2.856)
P: (84.818,123.819,-8.726)
C4': (84.442,122.688,-4.991)
C2': (84.846,124.057,-3.103)
O2': (84.167,123.339,-2.096)
N1: (89.380,126.669,-1.569)
N2: (88.261,126.163,0.376)
N3: (87.623,125.071,-1.542)
N7: (88.835,125.240,-4.914)
N9: (87.254,124.158,-3.759)
O5': (85.089,123.482,-7.190)
O3': (82.681,124.188,-4.254)
OP1: (83.187,121.090,2.366)
OP2: (84.958,119.265,2.822)
C3': (83.632,118.848,-2.145)
C1': (85.769,119.114,-3.097)
C5': (83.904,120.844,-0.512)
O6: (89.323,114.542,-1.537)
O4': (85.538,120.198,-2.213)
C8: (87.119,118.197,-1.149)
C2: (87.626,115.470,-4.526)
C6: (88.617,115.222,-2.293)
C5: (87.939,116.434,-2.013)
C4: (87.188,117.023,-3.009)
P: (84.487,120.429,2.027)
C4': (84.118,120.267,-1.896)
C2': (84.405,118.493,-3.405)
O2': (83.863,119.129,-4.548)
N1: (88.403,114.807,-3.605)
N2: (87.527,114.905,-5.736)
N3: (86.988,116.601,-4.276)
N7: (87.888,117.185,-0.848)
N9: (86.656,118.159,-2.442)
O5': (84.458,119.980,0.496)
O3': (82.228,118.794,-2.362)
OP2: (84.958,119.265,2.822)
C3': (83.632,118.848,-2.145)
C1': (85.769,119.114,-3.097)
C5': (83.904,120.844,-0.512)
O6: (89.323,114.542,-1.537)
O4': (85.538,120.198,-2.213)
C8: (87.119,118.197,-1.149)
C2: (87.626,115.470,-4.526)
C6: (88.617,115.222,-2.293)
C5: (87.939,116.434,-2.013)
C4: (87.188,117.023,-3.009)
P: (84.487,120.429,2.027)
C4': (84.118,120.267,-1.896)
C2': (84.405,118.493,-3.405)
O2': (83.863,119.129,-4.548)
N1: (88.403,114.807,-3.605)
N2: (87.527,114.905,-5.736)
N3: (86.988,116.601,-4.276)
N7: (87.888,117.185,-0.848)
N9: (86.656,118.159,-2.442)
O5': (84.458,119.980,0.496)
O3': (82.228,118.794,-2.362)
Image (generated by PyMOL):