ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0179:0224

Extra

PDB:
ATOM 1 O3' G A 178 71.444 104.987 19.192 1.00 42.84 O
ATOM 2 P A A 179 72.843 105.003 18.416 1.00 44.46 P
ATOM 3 OP1 A A 179 73.333 103.599 18.365 1.00 42.81 O
ATOM 4 OP2 A A 179 73.706 106.048 19.019 1.00 46.26 O
ATOM 5 O5' A A 179 72.413 105.490 16.960 1.00 45.27 O
ATOM 6 C5' A A 179 72.888 104.828 15.767 1.00 44.91 C
ATOM 7 C4' A A 179 72.005 103.640 15.435 1.00 44.47 C
ATOM 8 O4' A A 179 70.635 103.912 15.833 1.00 44.09 O
ATOM 9 C3' A A 179 71.954 103.292 13.956 1.00 44.25 C
ATOM 10 O3' A A 179 71.707 101.905 13.752 1.00 44.29 O
ATOM 11 C2' A A 179 70.758 104.107 13.488 1.00 43.84 C
ATOM 12 O2' A A 179 70.183 103.580 12.315 1.00 44.61 O
ATOM 13 C1' A A 179 69.814 104.004 14.690 1.00 43.02 C
ATOM 14 N9 A A 179 68.998 105.207 14.830 1.00 41.99 N
ATOM 15 C8 A A 179 69.371 106.401 15.391 1.00 42.72 C
ATOM 16 N7 A A 179 68.455 107.335 15.308 1.00 42.24 N
ATOM 17 C5 A A 179 67.403 106.710 14.662 1.00 42.04 C
ATOM 18 C6 A A 179 66.146 107.170 14.252 1.00 43.07 C
ATOM 19 N6 A A 179 65.728 108.429 14.417 1.00 43.02 N
ATOM 20 N1 A A 179 65.324 106.286 13.645 1.00 43.73 N
ATOM 21 C2 A A 179 65.758 105.034 13.450 1.00 42.67 C
ATOM 22 N3 A A 179 66.927 104.489 13.772 1.00 42.11 N
ATOM 23 C4 A A 179 67.713 105.390 14.384 1.00 42.30 C
ATOM 24 P A A 180 72.943 100.888 13.616 1.00 46.84 P
ATOM 25 OP1 A A 180 74.097 101.599 12.997 1.00 46.18 O
ATOM 26 OP2 A A 180 72.449 99.626 13.004 1.00 46.46 O
ATOM 27 O5' A A 180 73.312 100.602 15.134 1.00 45.28 O
TER

ATOM 1 O3' C B 223 58.351 108.424 12.184 1.00 46.44 O
ATOM 2 P A B 224 58.442 107.951 10.652 1.00 44.65 P
ATOM 3 OP1 A B 224 59.143 109.004 9.880 1.00 47.46 O
ATOM 4 OP2 A B 224 57.077 107.523 10.246 1.00 43.15 O
ATOM 5 O5' A B 224 59.395 106.686 10.724 1.00 42.64 O
ATOM 6 C5' A B 224 60.174 106.279 9.602 1.00 43.52 C
ATOM 7 C4' A B 224 61.625 106.233 9.987 1.00 44.28 C
ATOM 8 O4' A B 224 62.184 107.567 9.925 1.00 44.38 O
ATOM 9 C3' A B 224 61.902 105.714 11.393 1.00 45.28 C
ATOM 10 O3' A B 224 63.153 105.039 11.411 1.00 48.75 O
ATOM 11 C2' A B 224 62.025 107.014 12.187 1.00 45.49 C
ATOM 12 O2' A B 224 62.781 106.888 13.376 1.00 45.44 O
ATOM 13 C1' A B 224 62.741 107.901 11.172 1.00 43.72 C
ATOM 14 N9 A B 224 62.598 109.342 11.349 1.00 42.38 N
ATOM 15 C8 A B 224 61.481 110.124 11.177 1.00 41.36 C
ATOM 16 N7 A B 224 61.699 111.404 11.353 1.00 39.29 N
ATOM 17 C5 A B 224 63.046 111.467 11.675 1.00 40.26 C
ATOM 18 C6 A B 224 63.888 112.540 11.975 1.00 41.05 C
ATOM 19 N6 A B 224 63.481 113.811 12.001 1.00 42.66 N
ATOM 20 N1 A B 224 65.183 112.263 12.255 1.00 41.74 N
ATOM 21 C2 A B 224 65.586 110.986 12.239 1.00 41.31 C
ATOM 22 N3 A B 224 64.886 109.891 11.975 1.00 41.73 N
ATOM 23 C4 A B 224 63.608 110.204 11.693 1.00 41.53 C
ATOM 24 P G B 225 63.349 103.676 10.576 1.00 50.53 P
ATOM 25 OP1 G B 225 62.096 103.447 9.797 1.00 46.53 O
ATOM 26 OP2 G B 225 63.847 102.611 11.491 1.00 51.43 O
ATOM 27 O5' G B 225 64.543 104.058 9.588 1.00 49.67 O
TER

Atoms:
OP1: (73.333,103.599,18.365)
OP2: (73.706,106.048,19.019)
C3': (71.954,103.292,13.956)
C1': (69.814,104.004,14.690)
C5': (72.888,104.828,15.767)
O4': (70.635,103.912,15.833)
C8: (69.371,106.401,15.391)
O2': (70.183,103.580,12.315)
C6: (66.146,107.170,14.252)
C5: (67.403,106.710,14.662)
C4: (67.713,105.390,14.384)
P: (72.843,105.003,18.416)
C4': (72.005,103.640,15.435)
C2': (70.758,104.107,13.488)
C2: (65.758,105.034,13.450)
N1: (65.324,106.286,13.645)
N3: (66.927,104.489,13.772)
N6: (65.728,108.429,14.417)
N7: (68.455,107.335,15.308)
N9: (68.998,105.207,14.830)
O5': (72.413,105.490,16.960)
O3': (71.707,101.905,13.752)
OP1: (59.143,109.004,9.880)
OP2: (57.077,107.523,10.246)
C3': (61.902,105.714,11.393)
C1': (62.741,107.901,11.172)
C5': (60.174,106.279,9.602)
O4': (62.184,107.567,9.925)
C8: (61.481,110.124,11.177)
O2': (62.781,106.888,13.376)
C6: (63.888,112.540,11.975)
C5: (63.046,111.467,11.675)
C4: (63.608,110.204,11.693)
P: (58.442,107.951,10.652)
C4': (61.625,106.233,9.987)
C2': (62.025,107.014,12.187)
C2: (65.586,110.986,12.239)
N1: (65.183,112.263,12.255)
N3: (64.886,109.891,11.975)
N6: (63.481,113.811,12.001)
N7: (61.699,111.404,11.353)
N9: (62.598,109.342,11.349)
O5': (59.395,106.686,10.724)
O3': (63.153,105.039,11.411)
Image (generated by PyMOL):
PyMOL image
show in jmol