Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.021 122.402 -9.420 1.00 60.32 O
ATOM 2 P G A 237 84.772 123.798 -8.658 1.00 63.89 P
ATOM 3 OP1 G A 237 83.338 124.153 -8.836 1.00 60.23 O
ATOM 4 OP2 G A 237 85.824 124.756 -9.089 1.00 63.65 O
ATOM 5 O5' G A 237 85.033 123.471 -7.119 1.00 64.96 O
ATOM 6 C5' G A 237 84.259 122.477 -6.419 1.00 62.90 C
ATOM 7 C4' G A 237 84.398 122.666 -4.925 1.00 62.29 C
ATOM 8 O4' G A 237 85.791 122.522 -4.540 1.00 62.23 O
ATOM 9 C3' G A 237 84.011 124.036 -4.387 1.00 60.87 C
ATOM 10 O3' G A 237 82.602 124.130 -4.201 1.00 59.37 O
ATOM 11 C2' G A 237 84.763 124.088 -3.064 1.00 61.78 C
ATOM 12 O2' G A 237 84.105 123.386 -2.034 1.00 63.82 O
ATOM 13 C1' G A 237 86.057 123.348 -3.416 1.00 63.05 C
ATOM 14 N9 G A 237 87.164 124.246 -3.728 1.00 64.08 N
ATOM 15 C8 G A 237 87.745 124.473 -4.952 1.00 65.64 C
ATOM 16 N7 G A 237 88.712 125.350 -4.905 1.00 65.71 N
ATOM 17 C5 G A 237 88.774 125.722 -3.569 1.00 65.98 C
ATOM 18 C6 G A 237 89.625 126.646 -2.908 1.00 65.97 C
ATOM 19 O6 G A 237 90.516 127.355 -3.388 1.00 67.10 O
ATOM 20 N1 G A 237 89.352 126.706 -1.547 1.00 66.09 N
ATOM 21 C2 G A 237 88.383 125.980 -0.906 1.00 66.30 C
ATOM 22 N2 G A 237 88.272 126.168 0.412 1.00 66.77 N
ATOM 23 N3 G A 237 87.580 125.128 -1.510 1.00 67.04 N
ATOM 24 C4 G A 237 87.830 125.046 -2.830 1.00 65.69 C
ATOM 25 P C A 238 81.911 125.568 -3.985 1.00 61.10 P
ATOM 26 OP1 C A 238 80.437 125.356 -3.999 1.00 60.03 O
ATOM 27 OP2 C A 238 82.518 126.542 -4.926 1.00 60.38 O
ATOM 28 O5' C A 238 82.327 125.983 -2.503 1.00 61.36 O
TER
ATOM 1 O3' U B 253 85.581 121.568 2.070 1.00 48.28 O
ATOM 2 P G B 254 84.487 120.396 2.046 1.00 50.32 P
ATOM 3 OP1 G B 254 83.197 120.998 2.478 1.00 49.51 O
ATOM 4 OP2 G B 254 85.036 119.222 2.766 1.00 50.16 O
ATOM 5 O5' G B 254 84.387 119.979 0.508 1.00 52.83 O
ATOM 6 C5' G B 254 83.787 120.858 -0.462 1.00 55.08 C
ATOM 7 C4' G B 254 83.969 120.308 -1.862 1.00 56.68 C
ATOM 8 O4' G B 254 85.384 120.254 -2.196 1.00 55.72 O
ATOM 9 C3' G B 254 83.495 118.885 -2.108 1.00 56.35 C
ATOM 10 O3' G B 254 82.092 118.804 -2.310 1.00 57.95 O
ATOM 11 C2' G B 254 84.265 118.525 -3.367 1.00 56.25 C
ATOM 12 O2' G B 254 83.716 119.132 -4.519 1.00 55.90 O
ATOM 13 C1' G B 254 85.621 119.161 -3.067 1.00 55.74 C
ATOM 14 N9 G B 254 86.512 118.218 -2.401 1.00 55.94 N
ATOM 15 C8 G B 254 86.957 118.262 -1.103 1.00 56.13 C
ATOM 16 N7 G B 254 87.737 117.262 -0.795 1.00 55.71 N
ATOM 17 C5 G B 254 87.810 116.511 -1.959 1.00 56.59 C
ATOM 18 C6 G B 254 88.502 115.304 -2.231 1.00 57.72 C
ATOM 19 O6 G B 254 89.209 114.631 -1.470 1.00 58.63 O
ATOM 20 N1 G B 254 88.306 114.888 -3.543 1.00 58.04 N
ATOM 21 C2 G B 254 87.536 115.545 -4.473 1.00 57.73 C
ATOM 22 N2 G B 254 87.462 114.985 -5.687 1.00 57.83 N
ATOM 23 N3 G B 254 86.885 116.667 -4.230 1.00 57.03 N
ATOM 24 C4 G B 254 87.065 117.090 -2.962 1.00 56.61 C
ATOM 25 P G B 255 81.325 117.418 -2.022 1.00 58.54 P
ATOM 26 OP1 G B 255 79.876 117.690 -2.219 1.00 56.57 O
ATOM 27 OP2 G B 255 81.806 116.877 -0.723 1.00 59.31 O
ATOM 28 O5' G B 255 81.829 116.429 -3.168 1.00 59.48 O
TER
ATOM 2 P G A 237 84.772 123.798 -8.658 1.00 63.89 P
ATOM 3 OP1 G A 237 83.338 124.153 -8.836 1.00 60.23 O
ATOM 4 OP2 G A 237 85.824 124.756 -9.089 1.00 63.65 O
ATOM 5 O5' G A 237 85.033 123.471 -7.119 1.00 64.96 O
ATOM 6 C5' G A 237 84.259 122.477 -6.419 1.00 62.90 C
ATOM 7 C4' G A 237 84.398 122.666 -4.925 1.00 62.29 C
ATOM 8 O4' G A 237 85.791 122.522 -4.540 1.00 62.23 O
ATOM 9 C3' G A 237 84.011 124.036 -4.387 1.00 60.87 C
ATOM 10 O3' G A 237 82.602 124.130 -4.201 1.00 59.37 O
ATOM 11 C2' G A 237 84.763 124.088 -3.064 1.00 61.78 C
ATOM 12 O2' G A 237 84.105 123.386 -2.034 1.00 63.82 O
ATOM 13 C1' G A 237 86.057 123.348 -3.416 1.00 63.05 C
ATOM 14 N9 G A 237 87.164 124.246 -3.728 1.00 64.08 N
ATOM 15 C8 G A 237 87.745 124.473 -4.952 1.00 65.64 C
ATOM 16 N7 G A 237 88.712 125.350 -4.905 1.00 65.71 N
ATOM 17 C5 G A 237 88.774 125.722 -3.569 1.00 65.98 C
ATOM 18 C6 G A 237 89.625 126.646 -2.908 1.00 65.97 C
ATOM 19 O6 G A 237 90.516 127.355 -3.388 1.00 67.10 O
ATOM 20 N1 G A 237 89.352 126.706 -1.547 1.00 66.09 N
ATOM 21 C2 G A 237 88.383 125.980 -0.906 1.00 66.30 C
ATOM 22 N2 G A 237 88.272 126.168 0.412 1.00 66.77 N
ATOM 23 N3 G A 237 87.580 125.128 -1.510 1.00 67.04 N
ATOM 24 C4 G A 237 87.830 125.046 -2.830 1.00 65.69 C
ATOM 25 P C A 238 81.911 125.568 -3.985 1.00 61.10 P
ATOM 26 OP1 C A 238 80.437 125.356 -3.999 1.00 60.03 O
ATOM 27 OP2 C A 238 82.518 126.542 -4.926 1.00 60.38 O
ATOM 28 O5' C A 238 82.327 125.983 -2.503 1.00 61.36 O
TER
ATOM 1 O3' U B 253 85.581 121.568 2.070 1.00 48.28 O
ATOM 2 P G B 254 84.487 120.396 2.046 1.00 50.32 P
ATOM 3 OP1 G B 254 83.197 120.998 2.478 1.00 49.51 O
ATOM 4 OP2 G B 254 85.036 119.222 2.766 1.00 50.16 O
ATOM 5 O5' G B 254 84.387 119.979 0.508 1.00 52.83 O
ATOM 6 C5' G B 254 83.787 120.858 -0.462 1.00 55.08 C
ATOM 7 C4' G B 254 83.969 120.308 -1.862 1.00 56.68 C
ATOM 8 O4' G B 254 85.384 120.254 -2.196 1.00 55.72 O
ATOM 9 C3' G B 254 83.495 118.885 -2.108 1.00 56.35 C
ATOM 10 O3' G B 254 82.092 118.804 -2.310 1.00 57.95 O
ATOM 11 C2' G B 254 84.265 118.525 -3.367 1.00 56.25 C
ATOM 12 O2' G B 254 83.716 119.132 -4.519 1.00 55.90 O
ATOM 13 C1' G B 254 85.621 119.161 -3.067 1.00 55.74 C
ATOM 14 N9 G B 254 86.512 118.218 -2.401 1.00 55.94 N
ATOM 15 C8 G B 254 86.957 118.262 -1.103 1.00 56.13 C
ATOM 16 N7 G B 254 87.737 117.262 -0.795 1.00 55.71 N
ATOM 17 C5 G B 254 87.810 116.511 -1.959 1.00 56.59 C
ATOM 18 C6 G B 254 88.502 115.304 -2.231 1.00 57.72 C
ATOM 19 O6 G B 254 89.209 114.631 -1.470 1.00 58.63 O
ATOM 20 N1 G B 254 88.306 114.888 -3.543 1.00 58.04 N
ATOM 21 C2 G B 254 87.536 115.545 -4.473 1.00 57.73 C
ATOM 22 N2 G B 254 87.462 114.985 -5.687 1.00 57.83 N
ATOM 23 N3 G B 254 86.885 116.667 -4.230 1.00 57.03 N
ATOM 24 C4 G B 254 87.065 117.090 -2.962 1.00 56.61 C
ATOM 25 P G B 255 81.325 117.418 -2.022 1.00 58.54 P
ATOM 26 OP1 G B 255 79.876 117.690 -2.219 1.00 56.57 O
ATOM 27 OP2 G B 255 81.806 116.877 -0.723 1.00 59.31 O
ATOM 28 O5' G B 255 81.829 116.429 -3.168 1.00 59.48 O
TER
Atoms:
OP1: (83.338,124.153,-8.836)
OP2: (85.824,124.756,-9.089)
C3': (84.011,124.036,-4.387)
C1': (86.057,123.348,-3.416)
C5': (84.259,122.477,-6.419)
O6: (90.516,127.355,-3.388)
O4': (85.791,122.522,-4.540)
C8: (87.745,124.473,-4.952)
C2: (88.383,125.980,-0.906)
C6: (89.625,126.646,-2.908)
C5: (88.774,125.722,-3.569)
C4: (87.830,125.046,-2.830)
P: (84.772,123.798,-8.658)
C4': (84.398,122.666,-4.925)
C2': (84.763,124.088,-3.064)
O2': (84.105,123.386,-2.034)
N1: (89.352,126.706,-1.547)
N2: (88.272,126.168,0.412)
N3: (87.580,125.128,-1.510)
N7: (88.712,125.350,-4.905)
N9: (87.164,124.246,-3.728)
O5': (85.033,123.471,-7.119)
O3': (82.602,124.130,-4.201)
OP2: (85.824,124.756,-9.089)
C3': (84.011,124.036,-4.387)
C1': (86.057,123.348,-3.416)
C5': (84.259,122.477,-6.419)
O6: (90.516,127.355,-3.388)
O4': (85.791,122.522,-4.540)
C8: (87.745,124.473,-4.952)
C2: (88.383,125.980,-0.906)
C6: (89.625,126.646,-2.908)
C5: (88.774,125.722,-3.569)
C4: (87.830,125.046,-2.830)
P: (84.772,123.798,-8.658)
C4': (84.398,122.666,-4.925)
C2': (84.763,124.088,-3.064)
O2': (84.105,123.386,-2.034)
N1: (89.352,126.706,-1.547)
N2: (88.272,126.168,0.412)
N3: (87.580,125.128,-1.510)
N7: (88.712,125.350,-4.905)
N9: (87.164,124.246,-3.728)
O5': (85.033,123.471,-7.119)
O3': (82.602,124.130,-4.201)
OP1: (83.197,120.998,2.478)
OP2: (85.036,119.222,2.766)
C3': (83.495,118.885,-2.108)
C1': (85.621,119.161,-3.067)
C5': (83.787,120.858,-0.462)
O6: (89.209,114.631,-1.470)
O4': (85.384,120.254,-2.196)
C8: (86.957,118.262,-1.103)
C2: (87.536,115.545,-4.473)
C6: (88.502,115.304,-2.231)
C5: (87.810,116.511,-1.959)
C4: (87.065,117.090,-2.962)
P: (84.487,120.396,2.046)
C4': (83.969,120.308,-1.862)
C2': (84.265,118.525,-3.367)
O2': (83.716,119.132,-4.519)
N1: (88.306,114.888,-3.543)
N2: (87.462,114.985,-5.687)
N3: (86.885,116.667,-4.230)
N7: (87.737,117.262,-0.795)
N9: (86.512,118.218,-2.401)
O5': (84.387,119.979,0.508)
O3': (82.092,118.804,-2.310)
OP2: (85.036,119.222,2.766)
C3': (83.495,118.885,-2.108)
C1': (85.621,119.161,-3.067)
C5': (83.787,120.858,-0.462)
O6: (89.209,114.631,-1.470)
O4': (85.384,120.254,-2.196)
C8: (86.957,118.262,-1.103)
C2: (87.536,115.545,-4.473)
C6: (88.502,115.304,-2.231)
C5: (87.810,116.511,-1.959)
C4: (87.065,117.090,-2.962)
P: (84.487,120.396,2.046)
C4': (83.969,120.308,-1.862)
C2': (84.265,118.525,-3.367)
O2': (83.716,119.132,-4.519)
N1: (88.306,114.888,-3.543)
N2: (87.462,114.985,-5.687)
N3: (86.885,116.667,-4.230)
N7: (87.737,117.262,-0.795)
N9: (86.512,118.218,-2.401)
O5': (84.387,119.979,0.508)
O3': (82.092,118.804,-2.310)
Image (generated by PyMOL):