Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 84.952 122.338 -9.370 1.00 64.58 O
ATOM 2 P G A 237 84.721 123.752 -8.635 1.00 68.98 P
ATOM 3 OP1 G A 237 83.293 124.132 -8.814 1.00 64.53 O
ATOM 4 OP2 G A 237 85.788 124.683 -9.084 1.00 67.99 O
ATOM 5 O5' G A 237 84.974 123.445 -7.089 1.00 69.82 O
ATOM 6 C5' G A 237 84.210 122.442 -6.389 1.00 68.33 C
ATOM 7 C4' G A 237 84.349 122.629 -4.894 1.00 67.80 C
ATOM 8 O4' G A 237 85.745 122.496 -4.514 1.00 68.17 O
ATOM 9 C3' G A 237 83.951 123.993 -4.351 1.00 66.48 C
ATOM 10 O3' G A 237 82.538 124.082 -4.170 1.00 65.05 O
ATOM 11 C2' G A 237 84.708 124.046 -3.031 1.00 66.97 C
ATOM 12 O2' G A 237 84.067 123.323 -2.005 1.00 68.77 O
ATOM 13 C1' G A 237 86.010 123.325 -3.393 1.00 68.36 C
ATOM 14 N9 G A 237 87.106 124.236 -3.713 1.00 69.86 N
ATOM 15 C8 G A 237 87.670 124.479 -4.943 1.00 71.34 C
ATOM 16 N7 G A 237 88.625 125.371 -4.902 1.00 70.98 N
ATOM 17 C5 G A 237 88.697 125.737 -3.565 1.00 70.84 C
ATOM 18 C6 G A 237 89.538 126.674 -2.908 1.00 70.39 C
ATOM 19 O6 G A 237 90.406 127.408 -3.394 1.00 70.93 O
ATOM 20 N1 G A 237 89.283 126.717 -1.544 1.00 69.80 N
ATOM 21 C2 G A 237 88.340 125.968 -0.895 1.00 70.52 C
ATOM 22 N2 G A 237 88.249 126.141 0.424 1.00 71.32 N
ATOM 23 N3 G A 237 87.542 125.107 -1.493 1.00 71.89 N
ATOM 24 C4 G A 237 87.774 125.039 -2.817 1.00 71.07 C
ATOM 25 P C A 238 81.837 125.520 -3.976 1.00 65.55 P
ATOM 26 OP1 C A 238 80.369 125.293 -3.986 1.00 64.84 O
ATOM 27 OP2 C A 238 82.433 126.490 -4.930 1.00 65.98 O
ATOM 28 O5' C A 238 82.252 125.957 -2.500 1.00 66.06 O
TER
ATOM 1 O3' U B 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 2 P G B 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 3 OP1 G B 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 4 OP2 G B 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 5 O5' G B 254 84.370 119.881 0.503 1.00 58.65 O
ATOM 6 C5' G B 254 83.745 120.764 -0.449 1.00 59.93 C
ATOM 7 C4' G B 254 83.903 120.224 -1.853 1.00 61.46 C
ATOM 8 O4' G B 254 85.311 120.181 -2.212 1.00 60.35 O
ATOM 9 C3' G B 254 83.433 118.798 -2.090 1.00 61.68 C
ATOM 10 O3' G B 254 82.028 118.716 -2.278 1.00 63.22 O
ATOM 11 C2' G B 254 84.192 118.431 -3.354 1.00 61.44 C
ATOM 12 O2' G B 254 83.625 119.015 -4.511 1.00 63.58 O
ATOM 13 C1' G B 254 85.545 119.084 -3.079 1.00 60.27 C
ATOM 14 N9 G B 254 86.458 118.157 -2.420 1.00 60.06 N
ATOM 15 C8 G B 254 86.934 118.221 -1.134 1.00 60.01 C
ATOM 16 N7 G B 254 87.728 117.232 -0.832 1.00 59.58 N
ATOM 17 C5 G B 254 87.778 116.466 -1.987 1.00 60.62 C
ATOM 18 C6 G B 254 88.472 115.263 -2.261 1.00 61.84 C
ATOM 19 O6 G B 254 89.201 114.604 -1.507 1.00 63.01 O
ATOM 20 N1 G B 254 88.246 114.829 -3.564 1.00 61.85 N
ATOM 21 C2 G B 254 87.448 115.468 -4.483 1.00 60.98 C
ATOM 22 N2 G B 254 87.343 114.890 -5.687 1.00 60.92 N
ATOM 23 N3 G B 254 86.797 116.588 -4.238 1.00 59.99 N
ATOM 24 C4 G B 254 87.005 117.027 -2.979 1.00 60.46 C
ATOM 25 P G B 255 81.269 117.327 -2.001 1.00 63.51 P
ATOM 26 OP1 G B 255 79.818 117.590 -2.179 1.00 62.09 O
ATOM 27 OP2 G B 255 81.770 116.777 -0.715 1.00 64.76 O
ATOM 28 O5' G B 255 81.768 116.357 -3.165 1.00 64.54 O
TER
ATOM 2 P G A 237 84.721 123.752 -8.635 1.00 68.98 P
ATOM 3 OP1 G A 237 83.293 124.132 -8.814 1.00 64.53 O
ATOM 4 OP2 G A 237 85.788 124.683 -9.084 1.00 67.99 O
ATOM 5 O5' G A 237 84.974 123.445 -7.089 1.00 69.82 O
ATOM 6 C5' G A 237 84.210 122.442 -6.389 1.00 68.33 C
ATOM 7 C4' G A 237 84.349 122.629 -4.894 1.00 67.80 C
ATOM 8 O4' G A 237 85.745 122.496 -4.514 1.00 68.17 O
ATOM 9 C3' G A 237 83.951 123.993 -4.351 1.00 66.48 C
ATOM 10 O3' G A 237 82.538 124.082 -4.170 1.00 65.05 O
ATOM 11 C2' G A 237 84.708 124.046 -3.031 1.00 66.97 C
ATOM 12 O2' G A 237 84.067 123.323 -2.005 1.00 68.77 O
ATOM 13 C1' G A 237 86.010 123.325 -3.393 1.00 68.36 C
ATOM 14 N9 G A 237 87.106 124.236 -3.713 1.00 69.86 N
ATOM 15 C8 G A 237 87.670 124.479 -4.943 1.00 71.34 C
ATOM 16 N7 G A 237 88.625 125.371 -4.902 1.00 70.98 N
ATOM 17 C5 G A 237 88.697 125.737 -3.565 1.00 70.84 C
ATOM 18 C6 G A 237 89.538 126.674 -2.908 1.00 70.39 C
ATOM 19 O6 G A 237 90.406 127.408 -3.394 1.00 70.93 O
ATOM 20 N1 G A 237 89.283 126.717 -1.544 1.00 69.80 N
ATOM 21 C2 G A 237 88.340 125.968 -0.895 1.00 70.52 C
ATOM 22 N2 G A 237 88.249 126.141 0.424 1.00 71.32 N
ATOM 23 N3 G A 237 87.542 125.107 -1.493 1.00 71.89 N
ATOM 24 C4 G A 237 87.774 125.039 -2.817 1.00 71.07 C
ATOM 25 P C A 238 81.837 125.520 -3.976 1.00 65.55 P
ATOM 26 OP1 C A 238 80.369 125.293 -3.986 1.00 64.84 O
ATOM 27 OP2 C A 238 82.433 126.490 -4.930 1.00 65.98 O
ATOM 28 O5' C A 238 82.252 125.957 -2.500 1.00 66.06 O
TER
ATOM 1 O3' U B 253 85.558 121.470 2.064 1.00 54.50 O
ATOM 2 P G B 254 84.487 120.279 2.045 1.00 55.87 P
ATOM 3 OP1 G B 254 83.193 120.857 2.506 1.00 55.78 O
ATOM 4 OP2 G B 254 85.073 119.107 2.747 1.00 56.03 O
ATOM 5 O5' G B 254 84.370 119.881 0.503 1.00 58.65 O
ATOM 6 C5' G B 254 83.745 120.764 -0.449 1.00 59.93 C
ATOM 7 C4' G B 254 83.903 120.224 -1.853 1.00 61.46 C
ATOM 8 O4' G B 254 85.311 120.181 -2.212 1.00 60.35 O
ATOM 9 C3' G B 254 83.433 118.798 -2.090 1.00 61.68 C
ATOM 10 O3' G B 254 82.028 118.716 -2.278 1.00 63.22 O
ATOM 11 C2' G B 254 84.192 118.431 -3.354 1.00 61.44 C
ATOM 12 O2' G B 254 83.625 119.015 -4.511 1.00 63.58 O
ATOM 13 C1' G B 254 85.545 119.084 -3.079 1.00 60.27 C
ATOM 14 N9 G B 254 86.458 118.157 -2.420 1.00 60.06 N
ATOM 15 C8 G B 254 86.934 118.221 -1.134 1.00 60.01 C
ATOM 16 N7 G B 254 87.728 117.232 -0.832 1.00 59.58 N
ATOM 17 C5 G B 254 87.778 116.466 -1.987 1.00 60.62 C
ATOM 18 C6 G B 254 88.472 115.263 -2.261 1.00 61.84 C
ATOM 19 O6 G B 254 89.201 114.604 -1.507 1.00 63.01 O
ATOM 20 N1 G B 254 88.246 114.829 -3.564 1.00 61.85 N
ATOM 21 C2 G B 254 87.448 115.468 -4.483 1.00 60.98 C
ATOM 22 N2 G B 254 87.343 114.890 -5.687 1.00 60.92 N
ATOM 23 N3 G B 254 86.797 116.588 -4.238 1.00 59.99 N
ATOM 24 C4 G B 254 87.005 117.027 -2.979 1.00 60.46 C
ATOM 25 P G B 255 81.269 117.327 -2.001 1.00 63.51 P
ATOM 26 OP1 G B 255 79.818 117.590 -2.179 1.00 62.09 O
ATOM 27 OP2 G B 255 81.770 116.777 -0.715 1.00 64.76 O
ATOM 28 O5' G B 255 81.768 116.357 -3.165 1.00 64.54 O
TER
Atoms:
OP1: (83.293,124.132,-8.814)
OP2: (85.788,124.683,-9.084)
C3': (83.951,123.993,-4.351)
C1': (86.010,123.325,-3.393)
C5': (84.210,122.442,-6.389)
O6: (90.406,127.408,-3.394)
O4': (85.745,122.496,-4.514)
C8: (87.670,124.479,-4.943)
C2: (88.340,125.968,-0.895)
C6: (89.538,126.674,-2.908)
C5: (88.697,125.737,-3.565)
C4: (87.774,125.039,-2.817)
P: (84.721,123.752,-8.635)
C4': (84.349,122.629,-4.894)
C2': (84.708,124.046,-3.031)
O2': (84.067,123.323,-2.005)
N1: (89.283,126.717,-1.544)
N2: (88.249,126.141,0.424)
N3: (87.542,125.107,-1.493)
N7: (88.625,125.371,-4.902)
N9: (87.106,124.236,-3.713)
O5': (84.974,123.445,-7.089)
O3': (82.538,124.082,-4.170)
OP2: (85.788,124.683,-9.084)
C3': (83.951,123.993,-4.351)
C1': (86.010,123.325,-3.393)
C5': (84.210,122.442,-6.389)
O6: (90.406,127.408,-3.394)
O4': (85.745,122.496,-4.514)
C8: (87.670,124.479,-4.943)
C2: (88.340,125.968,-0.895)
C6: (89.538,126.674,-2.908)
C5: (88.697,125.737,-3.565)
C4: (87.774,125.039,-2.817)
P: (84.721,123.752,-8.635)
C4': (84.349,122.629,-4.894)
C2': (84.708,124.046,-3.031)
O2': (84.067,123.323,-2.005)
N1: (89.283,126.717,-1.544)
N2: (88.249,126.141,0.424)
N3: (87.542,125.107,-1.493)
N7: (88.625,125.371,-4.902)
N9: (87.106,124.236,-3.713)
O5': (84.974,123.445,-7.089)
O3': (82.538,124.082,-4.170)
OP1: (83.193,120.857,2.506)
OP2: (85.073,119.107,2.747)
C3': (83.433,118.798,-2.090)
C1': (85.545,119.084,-3.079)
C5': (83.745,120.764,-0.449)
O6: (89.201,114.604,-1.507)
O4': (85.311,120.181,-2.212)
C8: (86.934,118.221,-1.134)
C2: (87.448,115.468,-4.483)
C6: (88.472,115.263,-2.261)
C5: (87.778,116.466,-1.987)
C4: (87.005,117.027,-2.979)
P: (84.487,120.279,2.045)
C4': (83.903,120.224,-1.853)
C2': (84.192,118.431,-3.354)
O2': (83.625,119.015,-4.511)
N1: (88.246,114.829,-3.564)
N2: (87.343,114.890,-5.687)
N3: (86.797,116.588,-4.238)
N7: (87.728,117.232,-0.832)
N9: (86.458,118.157,-2.420)
O5': (84.370,119.881,0.503)
O3': (82.028,118.716,-2.278)
OP2: (85.073,119.107,2.747)
C3': (83.433,118.798,-2.090)
C1': (85.545,119.084,-3.079)
C5': (83.745,120.764,-0.449)
O6: (89.201,114.604,-1.507)
O4': (85.311,120.181,-2.212)
C8: (86.934,118.221,-1.134)
C2: (87.448,115.468,-4.483)
C6: (88.472,115.263,-2.261)
C5: (87.778,116.466,-1.987)
C4: (87.005,117.027,-2.979)
P: (84.487,120.279,2.045)
C4': (83.903,120.224,-1.853)
C2': (84.192,118.431,-3.354)
O2': (83.625,119.015,-4.511)
N1: (88.246,114.829,-3.564)
N2: (87.343,114.890,-5.687)
N3: (86.797,116.588,-4.238)
N7: (87.728,117.232,-0.832)
N9: (86.458,118.157,-2.420)
O5': (84.370,119.881,0.503)
O3': (82.028,118.716,-2.278)
Image (generated by PyMOL):