Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02682:02677
Extra
PDB:
ATOM 1 O3' G A2681 37.004 161.712 111.698 1.00 49.72 O
ATOM 2 P A A2682 36.659 162.599 113.009 1.00 50.02 P
ATOM 3 OP1 A A2682 35.187 162.812 112.999 1.00 48.68 O
ATOM 4 OP2 A A2682 37.570 163.778 113.015 1.00 47.19 O
ATOM 5 O5' A A2682 37.008 161.666 114.256 1.00 45.16 O
ATOM 6 C5' A A2682 36.286 160.451 114.498 1.00 45.77 C
ATOM 7 C4' A A2682 36.950 159.659 115.602 1.00 48.26 C
ATOM 8 O4' A A2682 38.353 159.447 115.275 1.00 48.75 O
ATOM 9 C3' A A2682 36.996 160.342 116.958 1.00 47.65 C
ATOM 10 O3' A A2682 35.776 160.184 117.665 1.00 48.56 O
ATOM 11 C2' A A2682 38.170 159.643 117.628 1.00 45.68 C
ATOM 12 O2' A A2682 37.859 158.344 118.066 1.00 44.10 O
ATOM 13 C1' A A2682 39.141 159.533 116.457 1.00 46.48 C
ATOM 14 N9 A A2682 39.966 160.733 116.368 1.00 44.95 N
ATOM 15 C8 A A2682 39.933 161.707 115.404 1.00 45.37 C
ATOM 16 N7 A A2682 40.770 162.690 115.619 1.00 47.14 N
ATOM 17 C5 A A2682 41.405 162.336 116.804 1.00 47.76 C
ATOM 18 C6 A A2682 42.405 162.966 117.580 1.00 47.24 C
ATOM 19 N6 A A2682 42.954 164.151 117.282 1.00 48.30 N
ATOM 20 N1 A A2682 42.823 162.331 118.694 1.00 46.18 N
ATOM 21 C2 A A2682 42.268 161.159 119.009 1.00 44.79 C
ATOM 22 N3 A A2682 41.321 160.478 118.375 1.00 46.56 N
ATOM 23 C4 A A2682 40.927 161.126 117.267 1.00 46.14 C
ATOM 24 P C A2683 35.212 161.394 118.560 1.00 47.94 P
ATOM 25 OP1 C A2683 33.968 160.889 119.205 1.00 46.84 O
ATOM 26 OP2 C A2683 35.167 162.625 117.729 1.00 46.48 O
ATOM 27 O5' C A2683 36.331 161.596 119.672 1.00 46.48 O
TER
ATOM 1 O3' U B2676 47.403 165.468 126.624 1.00 49.49 O
ATOM 2 P A B2677 48.348 164.487 125.781 1.00 45.75 P
ATOM 3 OP1 A B2677 48.562 163.272 126.594 1.00 47.00 O
ATOM 4 OP2 A B2677 49.511 165.234 125.281 1.00 47.07 O
ATOM 5 O5' A B2677 47.442 164.111 124.533 1.00 47.44 O
ATOM 6 C5' A B2677 46.250 163.329 124.713 1.00 45.87 C
ATOM 7 C4' A B2677 45.533 163.172 123.403 1.00 44.70 C
ATOM 8 O4' A B2677 44.989 164.448 122.984 1.00 45.36 O
ATOM 9 C3' A B2677 46.403 162.777 122.228 1.00 44.16 C
ATOM 10 O3' A B2677 46.720 161.400 122.228 1.00 44.76 O
ATOM 11 C2' A B2677 45.525 163.183 121.060 1.00 44.50 C
ATOM 12 O2' A B2677 44.423 162.317 120.911 1.00 44.77 O
ATOM 13 C1' A B2677 44.994 164.521 121.563 1.00 45.40 C
ATOM 14 N9 A B2677 45.847 165.639 121.155 1.00 46.26 N
ATOM 15 C8 A B2677 46.825 166.261 121.891 1.00 45.80 C
ATOM 16 N7 A B2677 47.403 167.258 121.266 1.00 46.58 N
ATOM 17 C5 A B2677 46.768 167.294 120.034 1.00 46.46 C
ATOM 18 C6 A B2677 46.921 168.135 118.919 1.00 48.27 C
ATOM 19 N6 A B2677 47.771 169.173 118.891 1.00 48.39 N
ATOM 20 N1 A B2677 46.155 167.882 117.828 1.00 47.82 N
ATOM 21 C2 A B2677 45.283 166.866 117.882 1.00 47.27 C
ATOM 22 N3 A B2677 45.031 166.021 118.884 1.00 47.69 N
ATOM 23 C4 A B2677 45.818 166.291 119.943 1.00 46.50 C
ATOM 24 P C B2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 25 OP1 C B2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 26 OP2 C B2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 27 O5' C B2678 47.692 161.064 119.938 1.00 42.78 O
TER
ATOM 2 P A A2682 36.659 162.599 113.009 1.00 50.02 P
ATOM 3 OP1 A A2682 35.187 162.812 112.999 1.00 48.68 O
ATOM 4 OP2 A A2682 37.570 163.778 113.015 1.00 47.19 O
ATOM 5 O5' A A2682 37.008 161.666 114.256 1.00 45.16 O
ATOM 6 C5' A A2682 36.286 160.451 114.498 1.00 45.77 C
ATOM 7 C4' A A2682 36.950 159.659 115.602 1.00 48.26 C
ATOM 8 O4' A A2682 38.353 159.447 115.275 1.00 48.75 O
ATOM 9 C3' A A2682 36.996 160.342 116.958 1.00 47.65 C
ATOM 10 O3' A A2682 35.776 160.184 117.665 1.00 48.56 O
ATOM 11 C2' A A2682 38.170 159.643 117.628 1.00 45.68 C
ATOM 12 O2' A A2682 37.859 158.344 118.066 1.00 44.10 O
ATOM 13 C1' A A2682 39.141 159.533 116.457 1.00 46.48 C
ATOM 14 N9 A A2682 39.966 160.733 116.368 1.00 44.95 N
ATOM 15 C8 A A2682 39.933 161.707 115.404 1.00 45.37 C
ATOM 16 N7 A A2682 40.770 162.690 115.619 1.00 47.14 N
ATOM 17 C5 A A2682 41.405 162.336 116.804 1.00 47.76 C
ATOM 18 C6 A A2682 42.405 162.966 117.580 1.00 47.24 C
ATOM 19 N6 A A2682 42.954 164.151 117.282 1.00 48.30 N
ATOM 20 N1 A A2682 42.823 162.331 118.694 1.00 46.18 N
ATOM 21 C2 A A2682 42.268 161.159 119.009 1.00 44.79 C
ATOM 22 N3 A A2682 41.321 160.478 118.375 1.00 46.56 N
ATOM 23 C4 A A2682 40.927 161.126 117.267 1.00 46.14 C
ATOM 24 P C A2683 35.212 161.394 118.560 1.00 47.94 P
ATOM 25 OP1 C A2683 33.968 160.889 119.205 1.00 46.84 O
ATOM 26 OP2 C A2683 35.167 162.625 117.729 1.00 46.48 O
ATOM 27 O5' C A2683 36.331 161.596 119.672 1.00 46.48 O
TER
ATOM 1 O3' U B2676 47.403 165.468 126.624 1.00 49.49 O
ATOM 2 P A B2677 48.348 164.487 125.781 1.00 45.75 P
ATOM 3 OP1 A B2677 48.562 163.272 126.594 1.00 47.00 O
ATOM 4 OP2 A B2677 49.511 165.234 125.281 1.00 47.07 O
ATOM 5 O5' A B2677 47.442 164.111 124.533 1.00 47.44 O
ATOM 6 C5' A B2677 46.250 163.329 124.713 1.00 45.87 C
ATOM 7 C4' A B2677 45.533 163.172 123.403 1.00 44.70 C
ATOM 8 O4' A B2677 44.989 164.448 122.984 1.00 45.36 O
ATOM 9 C3' A B2677 46.403 162.777 122.228 1.00 44.16 C
ATOM 10 O3' A B2677 46.720 161.400 122.228 1.00 44.76 O
ATOM 11 C2' A B2677 45.525 163.183 121.060 1.00 44.50 C
ATOM 12 O2' A B2677 44.423 162.317 120.911 1.00 44.77 O
ATOM 13 C1' A B2677 44.994 164.521 121.563 1.00 45.40 C
ATOM 14 N9 A B2677 45.847 165.639 121.155 1.00 46.26 N
ATOM 15 C8 A B2677 46.825 166.261 121.891 1.00 45.80 C
ATOM 16 N7 A B2677 47.403 167.258 121.266 1.00 46.58 N
ATOM 17 C5 A B2677 46.768 167.294 120.034 1.00 46.46 C
ATOM 18 C6 A B2677 46.921 168.135 118.919 1.00 48.27 C
ATOM 19 N6 A B2677 47.771 169.173 118.891 1.00 48.39 N
ATOM 20 N1 A B2677 46.155 167.882 117.828 1.00 47.82 N
ATOM 21 C2 A B2677 45.283 166.866 117.882 1.00 47.27 C
ATOM 22 N3 A B2677 45.031 166.021 118.884 1.00 47.69 N
ATOM 23 C4 A B2677 45.818 166.291 119.943 1.00 46.50 C
ATOM 24 P C B2678 48.045 160.902 121.476 1.00 44.25 P
ATOM 25 OP1 C B2678 48.224 159.463 121.782 1.00 43.62 O
ATOM 26 OP2 C B2678 49.133 161.857 121.770 1.00 45.97 O
ATOM 27 O5' C B2678 47.692 161.064 119.938 1.00 42.78 O
TER
Atoms:
OP1: (35.187,162.812,112.999)
OP2: (37.570,163.778,113.015)
C3': (36.996,160.342,116.958)
C1': (39.141,159.533,116.457)
C5': (36.286,160.451,114.498)
O4': (38.353,159.447,115.275)
C8: (39.933,161.707,115.404)
O2': (37.859,158.344,118.066)
C6: (42.405,162.966,117.580)
C5: (41.405,162.336,116.804)
C4: (40.927,161.126,117.267)
P: (36.659,162.599,113.009)
C4': (36.950,159.659,115.602)
C2': (38.170,159.643,117.628)
C2: (42.268,161.159,119.009)
N1: (42.823,162.331,118.694)
N3: (41.321,160.478,118.375)
N6: (42.954,164.151,117.282)
N7: (40.770,162.690,115.619)
N9: (39.966,160.733,116.368)
O5': (37.008,161.666,114.256)
O3': (35.776,160.184,117.665)
OP2: (37.570,163.778,113.015)
C3': (36.996,160.342,116.958)
C1': (39.141,159.533,116.457)
C5': (36.286,160.451,114.498)
O4': (38.353,159.447,115.275)
C8: (39.933,161.707,115.404)
O2': (37.859,158.344,118.066)
C6: (42.405,162.966,117.580)
C5: (41.405,162.336,116.804)
C4: (40.927,161.126,117.267)
P: (36.659,162.599,113.009)
C4': (36.950,159.659,115.602)
C2': (38.170,159.643,117.628)
C2: (42.268,161.159,119.009)
N1: (42.823,162.331,118.694)
N3: (41.321,160.478,118.375)
N6: (42.954,164.151,117.282)
N7: (40.770,162.690,115.619)
N9: (39.966,160.733,116.368)
O5': (37.008,161.666,114.256)
O3': (35.776,160.184,117.665)
OP1: (48.562,163.272,126.594)
OP2: (49.511,165.234,125.281)
C3': (46.403,162.777,122.228)
C1': (44.994,164.521,121.563)
C5': (46.250,163.329,124.713)
O4': (44.989,164.448,122.984)
C8: (46.825,166.261,121.891)
O2': (44.423,162.317,120.911)
C6: (46.921,168.135,118.919)
C5: (46.768,167.294,120.034)
C4: (45.818,166.291,119.943)
P: (48.348,164.487,125.781)
C4': (45.533,163.172,123.403)
C2': (45.525,163.183,121.060)
C2: (45.283,166.866,117.882)
N1: (46.155,167.882,117.828)
N3: (45.031,166.021,118.884)
N6: (47.771,169.173,118.891)
N7: (47.403,167.258,121.266)
N9: (45.847,165.639,121.155)
O5': (47.442,164.111,124.533)
O3': (46.720,161.400,122.228)
OP2: (49.511,165.234,125.281)
C3': (46.403,162.777,122.228)
C1': (44.994,164.521,121.563)
C5': (46.250,163.329,124.713)
O4': (44.989,164.448,122.984)
C8: (46.825,166.261,121.891)
O2': (44.423,162.317,120.911)
C6: (46.921,168.135,118.919)
C5: (46.768,167.294,120.034)
C4: (45.818,166.291,119.943)
P: (48.348,164.487,125.781)
C4': (45.533,163.172,123.403)
C2': (45.525,163.183,121.060)
C2: (45.283,166.866,117.882)
N1: (46.155,167.882,117.828)
N3: (45.031,166.021,118.884)
N6: (47.771,169.173,118.891)
N7: (47.403,167.258,121.266)
N9: (45.847,165.639,121.155)
O5': (47.442,164.111,124.533)
O3': (46.720,161.400,122.228)
Image (generated by PyMOL):