Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.109 122.558 -9.397 1.00 63.08 O
ATOM 2 P G A 237 84.923 123.967 -8.634 1.00 67.28 P
ATOM 3 OP1 G A 237 83.498 124.372 -8.780 1.00 64.08 O
ATOM 4 OP2 G A 237 85.997 124.889 -9.086 1.00 67.49 O
ATOM 5 O5' G A 237 85.185 123.635 -7.096 1.00 68.25 O
ATOM 6 C5' G A 237 84.398 122.641 -6.404 1.00 67.17 C
ATOM 7 C4' G A 237 84.530 122.812 -4.908 1.00 66.02 C
ATOM 8 O4' G A 237 85.920 122.650 -4.520 1.00 66.00 O
ATOM 9 C3' G A 237 84.145 124.174 -4.348 1.00 64.49 C
ATOM 10 O3' G A 237 82.728 124.271 -4.174 1.00 63.70 O
ATOM 11 C2' G A 237 84.897 124.197 -3.024 1.00 65.27 C
ATOM 12 O2' G A 237 84.248 123.461 -2.011 1.00 66.32 O
ATOM 13 C1' G A 237 86.194 123.472 -3.397 1.00 66.92 C
ATOM 14 N9 G A 237 87.285 124.384 -3.726 1.00 68.69 N
ATOM 15 C8 G A 237 87.836 124.626 -4.964 1.00 69.84 C
ATOM 16 N7 G A 237 88.784 125.524 -4.935 1.00 69.70 N
ATOM 17 C5 G A 237 88.866 125.895 -3.600 1.00 70.39 C
ATOM 18 C6 G A 237 89.703 126.843 -2.956 1.00 70.60 C
ATOM 19 O6 G A 237 90.560 127.584 -3.457 1.00 71.37 O
ATOM 20 N1 G A 237 89.460 126.891 -1.589 1.00 70.37 N
ATOM 21 C2 G A 237 88.528 126.137 -0.927 1.00 70.35 C
ATOM 22 N2 G A 237 88.444 126.316 0.392 1.00 70.74 N
ATOM 23 N3 G A 237 87.735 125.264 -1.514 1.00 71.54 N
ATOM 24 C4 G A 237 87.956 125.192 -2.841 1.00 70.34 C
ATOM 25 P C A 238 82.029 125.713 -3.982 1.00 63.16 P
ATOM 26 OP1 C A 238 80.561 125.502 -4.004 1.00 62.01 O
ATOM 27 OP2 C A 238 82.642 126.671 -4.938 1.00 64.42 O
ATOM 28 O5' C A 238 82.434 126.145 -2.501 1.00 63.80 O
TER
ATOM 1 O3' U B 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 2 P G B 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 3 OP1 G B 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 4 OP2 G B 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 5 O5' G B 254 84.441 120.027 0.566 1.00 56.68 O
ATOM 6 C5' G B 254 83.844 120.912 -0.403 1.00 58.00 C
ATOM 7 C4' G B 254 84.003 120.353 -1.802 1.00 59.28 C
ATOM 8 O4' G B 254 85.413 120.310 -2.166 1.00 58.42 O
ATOM 9 C3' G B 254 83.535 118.924 -2.025 1.00 59.44 C
ATOM 10 O3' G B 254 82.128 118.838 -2.206 1.00 60.90 O
ATOM 11 C2' G B 254 84.293 118.550 -3.290 1.00 59.00 C
ATOM 12 O2' G B 254 83.716 119.117 -4.448 1.00 59.30 O
ATOM 13 C1' G B 254 85.646 119.210 -3.030 1.00 57.11 C
ATOM 14 N9 G B 254 86.570 118.293 -2.372 1.00 56.76 N
ATOM 15 C8 G B 254 87.039 118.365 -1.083 1.00 56.65 C
ATOM 16 N7 G B 254 87.839 117.383 -0.772 1.00 55.41 N
ATOM 17 C5 G B 254 87.904 116.614 -1.925 1.00 56.72 C
ATOM 18 C6 G B 254 88.609 115.413 -2.189 1.00 56.41 C
ATOM 19 O6 G B 254 89.331 114.761 -1.429 1.00 57.00 O
ATOM 20 N1 G B 254 88.402 114.975 -3.493 1.00 57.07 N
ATOM 21 C2 G B 254 87.610 115.605 -4.422 1.00 57.09 C
ATOM 22 N2 G B 254 87.530 115.022 -5.628 1.00 56.65 N
ATOM 23 N3 G B 254 86.944 116.722 -4.187 1.00 56.70 N
ATOM 24 C4 G B 254 87.135 117.167 -2.926 1.00 57.11 C
ATOM 25 P G B 255 81.376 117.432 -1.977 1.00 61.70 P
ATOM 26 OP1 G B 255 79.929 117.701 -2.183 1.00 61.70 O
ATOM 27 OP2 G B 255 81.844 116.843 -0.694 1.00 63.17 O
ATOM 28 O5' G B 255 81.899 116.489 -3.153 1.00 62.26 O
TER
ATOM 2 P G A 237 84.923 123.967 -8.634 1.00 67.28 P
ATOM 3 OP1 G A 237 83.498 124.372 -8.780 1.00 64.08 O
ATOM 4 OP2 G A 237 85.997 124.889 -9.086 1.00 67.49 O
ATOM 5 O5' G A 237 85.185 123.635 -7.096 1.00 68.25 O
ATOM 6 C5' G A 237 84.398 122.641 -6.404 1.00 67.17 C
ATOM 7 C4' G A 237 84.530 122.812 -4.908 1.00 66.02 C
ATOM 8 O4' G A 237 85.920 122.650 -4.520 1.00 66.00 O
ATOM 9 C3' G A 237 84.145 124.174 -4.348 1.00 64.49 C
ATOM 10 O3' G A 237 82.728 124.271 -4.174 1.00 63.70 O
ATOM 11 C2' G A 237 84.897 124.197 -3.024 1.00 65.27 C
ATOM 12 O2' G A 237 84.248 123.461 -2.011 1.00 66.32 O
ATOM 13 C1' G A 237 86.194 123.472 -3.397 1.00 66.92 C
ATOM 14 N9 G A 237 87.285 124.384 -3.726 1.00 68.69 N
ATOM 15 C8 G A 237 87.836 124.626 -4.964 1.00 69.84 C
ATOM 16 N7 G A 237 88.784 125.524 -4.935 1.00 69.70 N
ATOM 17 C5 G A 237 88.866 125.895 -3.600 1.00 70.39 C
ATOM 18 C6 G A 237 89.703 126.843 -2.956 1.00 70.60 C
ATOM 19 O6 G A 237 90.560 127.584 -3.457 1.00 71.37 O
ATOM 20 N1 G A 237 89.460 126.891 -1.589 1.00 70.37 N
ATOM 21 C2 G A 237 88.528 126.137 -0.927 1.00 70.35 C
ATOM 22 N2 G A 237 88.444 126.316 0.392 1.00 70.74 N
ATOM 23 N3 G A 237 87.735 125.264 -1.514 1.00 71.54 N
ATOM 24 C4 G A 237 87.956 125.192 -2.841 1.00 70.34 C
ATOM 25 P C A 238 82.029 125.713 -3.982 1.00 63.16 P
ATOM 26 OP1 C A 238 80.561 125.502 -4.004 1.00 62.01 O
ATOM 27 OP2 C A 238 82.642 126.671 -4.938 1.00 64.42 O
ATOM 28 O5' C A 238 82.434 126.145 -2.501 1.00 63.80 O
TER
ATOM 1 O3' U B 253 85.649 121.651 2.090 1.00 53.90 O
ATOM 2 P G B 254 84.588 120.448 2.099 1.00 54.88 P
ATOM 3 OP1 G B 254 83.299 121.004 2.588 1.00 53.25 O
ATOM 4 OP2 G B 254 85.220 119.296 2.797 1.00 53.35 O
ATOM 5 O5' G B 254 84.441 120.027 0.566 1.00 56.68 O
ATOM 6 C5' G B 254 83.844 120.912 -0.403 1.00 58.00 C
ATOM 7 C4' G B 254 84.003 120.353 -1.802 1.00 59.28 C
ATOM 8 O4' G B 254 85.413 120.310 -2.166 1.00 58.42 O
ATOM 9 C3' G B 254 83.535 118.924 -2.025 1.00 59.44 C
ATOM 10 O3' G B 254 82.128 118.838 -2.206 1.00 60.90 O
ATOM 11 C2' G B 254 84.293 118.550 -3.290 1.00 59.00 C
ATOM 12 O2' G B 254 83.716 119.117 -4.448 1.00 59.30 O
ATOM 13 C1' G B 254 85.646 119.210 -3.030 1.00 57.11 C
ATOM 14 N9 G B 254 86.570 118.293 -2.372 1.00 56.76 N
ATOM 15 C8 G B 254 87.039 118.365 -1.083 1.00 56.65 C
ATOM 16 N7 G B 254 87.839 117.383 -0.772 1.00 55.41 N
ATOM 17 C5 G B 254 87.904 116.614 -1.925 1.00 56.72 C
ATOM 18 C6 G B 254 88.609 115.413 -2.189 1.00 56.41 C
ATOM 19 O6 G B 254 89.331 114.761 -1.429 1.00 57.00 O
ATOM 20 N1 G B 254 88.402 114.975 -3.493 1.00 57.07 N
ATOM 21 C2 G B 254 87.610 115.605 -4.422 1.00 57.09 C
ATOM 22 N2 G B 254 87.530 115.022 -5.628 1.00 56.65 N
ATOM 23 N3 G B 254 86.944 116.722 -4.187 1.00 56.70 N
ATOM 24 C4 G B 254 87.135 117.167 -2.926 1.00 57.11 C
ATOM 25 P G B 255 81.376 117.432 -1.977 1.00 61.70 P
ATOM 26 OP1 G B 255 79.929 117.701 -2.183 1.00 61.70 O
ATOM 27 OP2 G B 255 81.844 116.843 -0.694 1.00 63.17 O
ATOM 28 O5' G B 255 81.899 116.489 -3.153 1.00 62.26 O
TER
Atoms:
OP1: (83.498,124.372,-8.780)
OP2: (85.997,124.889,-9.086)
C3': (84.145,124.174,-4.348)
C1': (86.194,123.472,-3.397)
C5': (84.398,122.641,-6.404)
O6: (90.560,127.584,-3.457)
O4': (85.920,122.650,-4.520)
C8: (87.836,124.626,-4.964)
C2: (88.528,126.137,-0.927)
C6: (89.703,126.843,-2.956)
C5: (88.866,125.895,-3.600)
C4: (87.956,125.192,-2.841)
P: (84.923,123.967,-8.634)
C4': (84.530,122.812,-4.908)
C2': (84.897,124.197,-3.024)
O2': (84.248,123.461,-2.011)
N1: (89.460,126.891,-1.589)
N2: (88.444,126.316,0.392)
N3: (87.735,125.264,-1.514)
N7: (88.784,125.524,-4.935)
N9: (87.285,124.384,-3.726)
O5': (85.185,123.635,-7.096)
O3': (82.728,124.271,-4.174)
OP2: (85.997,124.889,-9.086)
C3': (84.145,124.174,-4.348)
C1': (86.194,123.472,-3.397)
C5': (84.398,122.641,-6.404)
O6: (90.560,127.584,-3.457)
O4': (85.920,122.650,-4.520)
C8: (87.836,124.626,-4.964)
C2: (88.528,126.137,-0.927)
C6: (89.703,126.843,-2.956)
C5: (88.866,125.895,-3.600)
C4: (87.956,125.192,-2.841)
P: (84.923,123.967,-8.634)
C4': (84.530,122.812,-4.908)
C2': (84.897,124.197,-3.024)
O2': (84.248,123.461,-2.011)
N1: (89.460,126.891,-1.589)
N2: (88.444,126.316,0.392)
N3: (87.735,125.264,-1.514)
N7: (88.784,125.524,-4.935)
N9: (87.285,124.384,-3.726)
O5': (85.185,123.635,-7.096)
O3': (82.728,124.271,-4.174)
OP1: (83.299,121.004,2.588)
OP2: (85.220,119.296,2.797)
C3': (83.535,118.924,-2.025)
C1': (85.646,119.210,-3.030)
C5': (83.844,120.912,-0.403)
O6: (89.331,114.761,-1.429)
O4': (85.413,120.310,-2.166)
C8: (87.039,118.365,-1.083)
C2: (87.610,115.605,-4.422)
C6: (88.609,115.413,-2.189)
C5: (87.904,116.614,-1.925)
C4: (87.135,117.167,-2.926)
P: (84.588,120.448,2.099)
C4': (84.003,120.353,-1.802)
C2': (84.293,118.550,-3.290)
O2': (83.716,119.117,-4.448)
N1: (88.402,114.975,-3.493)
N2: (87.530,115.022,-5.628)
N3: (86.944,116.722,-4.187)
N7: (87.839,117.383,-0.772)
N9: (86.570,118.293,-2.372)
O5': (84.441,120.027,0.566)
O3': (82.128,118.838,-2.206)
OP2: (85.220,119.296,2.797)
C3': (83.535,118.924,-2.025)
C1': (85.646,119.210,-3.030)
C5': (83.844,120.912,-0.403)
O6: (89.331,114.761,-1.429)
O4': (85.413,120.310,-2.166)
C8: (87.039,118.365,-1.083)
C2: (87.610,115.605,-4.422)
C6: (88.609,115.413,-2.189)
C5: (87.904,116.614,-1.925)
C4: (87.135,117.167,-2.926)
P: (84.588,120.448,2.099)
C4': (84.003,120.353,-1.802)
C2': (84.293,118.550,-3.290)
O2': (83.716,119.117,-4.448)
N1: (88.402,114.975,-3.493)
N2: (87.530,115.022,-5.628)
N3: (86.944,116.722,-4.187)
N7: (87.839,117.383,-0.772)
N9: (86.570,118.293,-2.372)
O5': (84.441,120.027,0.566)
O3': (82.128,118.838,-2.206)
Image (generated by PyMOL):