Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:944:937
Extra
PDB:
ATOM 1 O3' A A 43 80.918 20.271 100.002 1.00 77.13 O
ATOM 2 P A A 44 79.863 20.024 98.829 1.00 77.14 P
ATOM 3 OP1 A A 44 78.542 19.846 99.481 1.00 78.41 O
ATOM 4 OP2 A A 44 80.386 18.967 97.920 1.00 75.24 O
ATOM 5 O5' A A 44 79.875 21.401 98.026 1.00 77.24 O
ATOM 6 C5' A A 44 79.349 22.617 98.604 1.00 75.44 C
ATOM 7 C4' A A 44 79.389 23.733 97.587 1.00 73.57 C
ATOM 8 O4' A A 44 80.774 24.026 97.271 1.00 73.51 O
ATOM 9 C3' A A 44 78.742 23.403 96.248 1.00 73.13 C
ATOM 10 O3' A A 44 77.335 23.659 96.261 1.00 71.47 O
ATOM 11 C2' A A 44 79.488 24.320 95.290 1.00 74.38 C
ATOM 12 O2' A A 44 78.989 25.642 95.303 1.00 75.79 O
ATOM 13 C1' A A 44 80.901 24.294 95.884 1.00 75.28 C
ATOM 14 N9 A A 44 81.749 23.258 95.290 1.00 75.96 N
ATOM 15 C8 A A 44 81.983 21.985 95.751 1.00 76.95 C
ATOM 16 N7 A A 44 82.761 21.274 94.973 1.00 76.56 N
ATOM 17 C5 A A 44 83.067 22.137 93.932 1.00 76.22 C
ATOM 18 C6 A A 44 83.837 21.977 92.775 1.00 76.06 C
ATOM 19 N6 A A 44 84.457 20.843 92.450 1.00 77.64 N
ATOM 20 N1 A A 44 83.948 23.032 91.946 1.00 75.56 N
ATOM 21 C2 A A 44 83.316 24.164 92.264 1.00 76.48 C
ATOM 22 N3 A A 44 82.552 24.436 93.316 1.00 76.14 N
ATOM 23 C4 A A 44 82.464 23.367 94.122 1.00 76.14 C
ATOM 24 P C A 45 76.344 22.778 95.342 1.00 70.96 P
ATOM 25 OP1 C A 45 74.989 23.381 95.455 1.00 70.71 O
ATOM 26 OP2 C A 45 76.531 21.347 95.679 1.00 70.22 O
ATOM 27 O5' C A 45 76.877 23.008 93.856 1.00 70.36 O
TER
ATOM 1 O3' C B 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 2 P A B 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 3 OP1 A B 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 4 OP2 A B 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 5 O5' A B 37 84.571 23.128 84.507 1.00 76.37 O
ATOM 6 C5' A B 37 83.715 23.974 85.279 1.00 77.77 C
ATOM 7 C4' A B 37 83.885 23.680 86.740 1.00 79.90 C
ATOM 8 O4' A B 37 83.512 22.304 87.005 1.00 82.13 O
ATOM 9 C3' A B 37 85.309 23.754 87.250 1.00 80.88 C
ATOM 10 O3' A B 37 85.690 25.092 87.505 1.00 81.95 O
ATOM 11 C2' A B 37 85.223 22.932 88.525 1.00 81.52 C
ATOM 12 O2' A B 37 84.606 23.644 89.574 1.00 81.84 O
ATOM 13 C1' A B 37 84.287 21.806 88.087 1.00 82.15 C
ATOM 14 N9 A B 37 85.001 20.600 87.658 1.00 83.35 N
ATOM 15 C8 A B 37 85.141 20.064 86.397 1.00 83.61 C
ATOM 16 N7 A B 37 85.866 18.971 86.364 1.00 83.64 N
ATOM 17 C5 A B 37 86.229 18.773 87.692 1.00 85.00 C
ATOM 18 C6 A B 37 87.008 17.786 88.328 1.00 85.91 C
ATOM 19 N6 A B 37 87.603 16.779 87.683 1.00 87.22 N
ATOM 20 N1 A B 37 87.161 17.874 89.670 1.00 86.00 N
ATOM 21 C2 A B 37 86.574 18.888 90.317 1.00 85.25 C
ATOM 22 N3 A B 37 85.831 19.878 89.832 1.00 84.52 N
ATOM 23 C4 A B 37 85.694 19.762 88.499 1.00 84.34 C
ATOM 24 P U B 38 87.042 25.671 86.862 1.00 83.99 P
ATOM 25 OP1 U B 38 86.649 26.697 85.860 1.00 84.34 O
ATOM 26 OP2 U B 38 87.901 24.530 86.444 1.00 84.40 O
ATOM 27 O5' U B 38 87.742 26.417 88.082 1.00 84.20 O
TER
ATOM 2 P A A 44 79.863 20.024 98.829 1.00 77.14 P
ATOM 3 OP1 A A 44 78.542 19.846 99.481 1.00 78.41 O
ATOM 4 OP2 A A 44 80.386 18.967 97.920 1.00 75.24 O
ATOM 5 O5' A A 44 79.875 21.401 98.026 1.00 77.24 O
ATOM 6 C5' A A 44 79.349 22.617 98.604 1.00 75.44 C
ATOM 7 C4' A A 44 79.389 23.733 97.587 1.00 73.57 C
ATOM 8 O4' A A 44 80.774 24.026 97.271 1.00 73.51 O
ATOM 9 C3' A A 44 78.742 23.403 96.248 1.00 73.13 C
ATOM 10 O3' A A 44 77.335 23.659 96.261 1.00 71.47 O
ATOM 11 C2' A A 44 79.488 24.320 95.290 1.00 74.38 C
ATOM 12 O2' A A 44 78.989 25.642 95.303 1.00 75.79 O
ATOM 13 C1' A A 44 80.901 24.294 95.884 1.00 75.28 C
ATOM 14 N9 A A 44 81.749 23.258 95.290 1.00 75.96 N
ATOM 15 C8 A A 44 81.983 21.985 95.751 1.00 76.95 C
ATOM 16 N7 A A 44 82.761 21.274 94.973 1.00 76.56 N
ATOM 17 C5 A A 44 83.067 22.137 93.932 1.00 76.22 C
ATOM 18 C6 A A 44 83.837 21.977 92.775 1.00 76.06 C
ATOM 19 N6 A A 44 84.457 20.843 92.450 1.00 77.64 N
ATOM 20 N1 A A 44 83.948 23.032 91.946 1.00 75.56 N
ATOM 21 C2 A A 44 83.316 24.164 92.264 1.00 76.48 C
ATOM 22 N3 A A 44 82.552 24.436 93.316 1.00 76.14 N
ATOM 23 C4 A A 44 82.464 23.367 94.122 1.00 76.14 C
ATOM 24 P C A 45 76.344 22.778 95.342 1.00 70.96 P
ATOM 25 OP1 C A 45 74.989 23.381 95.455 1.00 70.71 O
ATOM 26 OP2 C A 45 76.531 21.347 95.679 1.00 70.22 O
ATOM 27 O5' C A 45 76.877 23.008 93.856 1.00 70.36 O
TER
ATOM 1 O3' C B 36 82.992 22.752 82.579 1.00 75.99 O
ATOM 2 P A B 37 84.511 23.158 82.921 1.00 76.53 P
ATOM 3 OP1 A B 37 84.723 24.563 82.504 1.00 78.37 O
ATOM 4 OP2 A B 37 85.411 22.099 82.403 1.00 77.64 O
ATOM 5 O5' A B 37 84.571 23.128 84.507 1.00 76.37 O
ATOM 6 C5' A B 37 83.715 23.974 85.279 1.00 77.77 C
ATOM 7 C4' A B 37 83.885 23.680 86.740 1.00 79.90 C
ATOM 8 O4' A B 37 83.512 22.304 87.005 1.00 82.13 O
ATOM 9 C3' A B 37 85.309 23.754 87.250 1.00 80.88 C
ATOM 10 O3' A B 37 85.690 25.092 87.505 1.00 81.95 O
ATOM 11 C2' A B 37 85.223 22.932 88.525 1.00 81.52 C
ATOM 12 O2' A B 37 84.606 23.644 89.574 1.00 81.84 O
ATOM 13 C1' A B 37 84.287 21.806 88.087 1.00 82.15 C
ATOM 14 N9 A B 37 85.001 20.600 87.658 1.00 83.35 N
ATOM 15 C8 A B 37 85.141 20.064 86.397 1.00 83.61 C
ATOM 16 N7 A B 37 85.866 18.971 86.364 1.00 83.64 N
ATOM 17 C5 A B 37 86.229 18.773 87.692 1.00 85.00 C
ATOM 18 C6 A B 37 87.008 17.786 88.328 1.00 85.91 C
ATOM 19 N6 A B 37 87.603 16.779 87.683 1.00 87.22 N
ATOM 20 N1 A B 37 87.161 17.874 89.670 1.00 86.00 N
ATOM 21 C2 A B 37 86.574 18.888 90.317 1.00 85.25 C
ATOM 22 N3 A B 37 85.831 19.878 89.832 1.00 84.52 N
ATOM 23 C4 A B 37 85.694 19.762 88.499 1.00 84.34 C
ATOM 24 P U B 38 87.042 25.671 86.862 1.00 83.99 P
ATOM 25 OP1 U B 38 86.649 26.697 85.860 1.00 84.34 O
ATOM 26 OP2 U B 38 87.901 24.530 86.444 1.00 84.40 O
ATOM 27 O5' U B 38 87.742 26.417 88.082 1.00 84.20 O
TER
Atoms:
OP1: (78.542,19.846,99.481)
OP2: (80.386,18.967,97.920)
C3': (78.742,23.403,96.248)
C1': (80.901,24.294,95.884)
C5': (79.349,22.617,98.604)
O4': (80.774,24.026,97.271)
C8: (81.983,21.985,95.751)
O2': (78.989,25.642,95.303)
C6: (83.837,21.977,92.775)
C5: (83.067,22.137,93.932)
C4: (82.464,23.367,94.122)
P: (79.863,20.024,98.829)
C4': (79.389,23.733,97.587)
C2': (79.488,24.320,95.290)
C2: (83.316,24.164,92.264)
N1: (83.948,23.032,91.946)
N3: (82.552,24.436,93.316)
N6: (84.457,20.843,92.450)
N7: (82.761,21.274,94.973)
N9: (81.749,23.258,95.290)
O5': (79.875,21.401,98.026)
O3': (77.335,23.659,96.261)
OP2: (80.386,18.967,97.920)
C3': (78.742,23.403,96.248)
C1': (80.901,24.294,95.884)
C5': (79.349,22.617,98.604)
O4': (80.774,24.026,97.271)
C8: (81.983,21.985,95.751)
O2': (78.989,25.642,95.303)
C6: (83.837,21.977,92.775)
C5: (83.067,22.137,93.932)
C4: (82.464,23.367,94.122)
P: (79.863,20.024,98.829)
C4': (79.389,23.733,97.587)
C2': (79.488,24.320,95.290)
C2: (83.316,24.164,92.264)
N1: (83.948,23.032,91.946)
N3: (82.552,24.436,93.316)
N6: (84.457,20.843,92.450)
N7: (82.761,21.274,94.973)
N9: (81.749,23.258,95.290)
O5': (79.875,21.401,98.026)
O3': (77.335,23.659,96.261)
OP1: (84.723,24.563,82.504)
OP2: (85.411,22.099,82.403)
C3': (85.309,23.754,87.250)
C1': (84.287,21.806,88.087)
C5': (83.715,23.974,85.279)
O4': (83.512,22.304,87.005)
C8: (85.141,20.064,86.397)
O2': (84.606,23.644,89.574)
C6: (87.008,17.786,88.328)
C5: (86.229,18.773,87.692)
C4: (85.694,19.762,88.499)
P: (84.511,23.158,82.921)
C4': (83.885,23.680,86.740)
C2': (85.223,22.932,88.525)
C2: (86.574,18.888,90.317)
N1: (87.161,17.874,89.670)
N3: (85.831,19.878,89.832)
N6: (87.603,16.779,87.683)
N7: (85.866,18.971,86.364)
N9: (85.001,20.600,87.658)
O5': (84.571,23.128,84.507)
O3': (85.690,25.092,87.505)
OP2: (85.411,22.099,82.403)
C3': (85.309,23.754,87.250)
C1': (84.287,21.806,88.087)
C5': (83.715,23.974,85.279)
O4': (83.512,22.304,87.005)
C8: (85.141,20.064,86.397)
O2': (84.606,23.644,89.574)
C6: (87.008,17.786,88.328)
C5: (86.229,18.773,87.692)
C4: (85.694,19.762,88.499)
P: (84.511,23.158,82.921)
C4': (83.885,23.680,86.740)
C2': (85.223,22.932,88.525)
C2: (86.574,18.888,90.317)
N1: (87.161,17.874,89.670)
N3: (85.831,19.878,89.832)
N6: (87.603,16.779,87.683)
N7: (85.866,18.971,86.364)
N9: (85.001,20.600,87.658)
O5': (84.571,23.128,84.507)
O3': (85.690,25.092,87.505)
Image (generated by PyMOL):