Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.005 122.230 -9.296 1.00 59.69 O
ATOM 2 P G A 237 84.812 123.662 -8.586 1.00 62.51 P
ATOM 3 OP1 G A 237 83.395 124.058 -8.791 1.00 59.54 O
ATOM 4 OP2 G A 237 85.898 124.565 -9.039 1.00 62.37 O
ATOM 5 O5' G A 237 85.038 123.379 -7.033 1.00 63.33 O
ATOM 6 C5' G A 237 84.256 122.393 -6.334 1.00 61.89 C
ATOM 7 C4' G A 237 84.394 122.578 -4.840 1.00 61.33 C
ATOM 8 O4' G A 237 85.787 122.429 -4.457 1.00 60.54 O
ATOM 9 C3' G A 237 84.005 123.944 -4.293 1.00 59.78 C
ATOM 10 O3' G A 237 82.592 124.037 -4.116 1.00 58.30 O
ATOM 11 C2' G A 237 84.760 123.983 -2.971 1.00 59.91 C
ATOM 12 O2' G A 237 84.114 123.251 -1.952 1.00 60.26 O
ATOM 13 C1' G A 237 86.058 123.258 -3.339 1.00 61.00 C
ATOM 14 N9 G A 237 87.151 124.167 -3.671 1.00 62.66 N
ATOM 15 C8 G A 237 87.669 124.442 -4.914 1.00 64.12 C
ATOM 16 N7 G A 237 88.638 125.318 -4.883 1.00 63.91 N
ATOM 17 C5 G A 237 88.768 125.639 -3.539 1.00 63.68 C
ATOM 18 C6 G A 237 89.648 126.541 -2.889 1.00 63.27 C
ATOM 19 O6 G A 237 90.512 127.272 -3.388 1.00 63.67 O
ATOM 20 N1 G A 237 89.446 126.549 -1.514 1.00 63.10 N
ATOM 21 C2 G A 237 88.515 125.795 -0.851 1.00 63.33 C
ATOM 22 N2 G A 237 88.473 125.933 0.476 1.00 63.59 N
ATOM 23 N3 G A 237 87.683 124.962 -1.444 1.00 64.39 N
ATOM 24 C4 G A 237 87.864 124.932 -2.777 1.00 63.91 C
ATOM 25 P C A 238 81.895 125.475 -3.916 1.00 59.18 P
ATOM 26 OP1 C A 238 80.424 125.259 -3.950 1.00 59.58 O
ATOM 27 OP2 C A 238 82.511 126.443 -4.855 1.00 59.06 O
ATOM 28 O5' C A 238 82.290 125.893 -2.430 1.00 60.19 O
TER
ATOM 1 O3' U B 253 85.646 121.463 2.181 1.00 47.60 O
ATOM 2 P G B 254 84.543 120.303 2.131 1.00 48.61 P
ATOM 3 OP1 G B 254 83.263 120.929 2.570 1.00 47.45 O
ATOM 4 OP2 G B 254 85.078 119.118 2.843 1.00 45.24 O
ATOM 5 O5' G B 254 84.447 119.904 0.588 1.00 50.86 O
ATOM 6 C5' G B 254 83.793 120.761 -0.367 1.00 53.05 C
ATOM 7 C4' G B 254 83.949 120.207 -1.768 1.00 54.44 C
ATOM 8 O4' G B 254 85.361 120.134 -2.111 1.00 53.75 O
ATOM 9 C3' G B 254 83.459 118.787 -2.001 1.00 54.29 C
ATOM 10 O3' G B 254 82.054 118.717 -2.202 1.00 55.87 O
ATOM 11 C2' G B 254 84.217 118.406 -3.261 1.00 54.48 C
ATOM 12 O2' G B 254 83.650 118.988 -4.419 1.00 55.23 O
ATOM 13 C1' G B 254 85.581 119.038 -2.983 1.00 53.28 C
ATOM 14 N9 G B 254 86.484 118.094 -2.331 1.00 53.43 N
ATOM 15 C8 G B 254 86.955 118.140 -1.042 1.00 53.02 C
ATOM 16 N7 G B 254 87.733 117.135 -0.746 1.00 52.18 N
ATOM 17 C5 G B 254 87.780 116.380 -1.908 1.00 53.21 C
ATOM 18 C6 G B 254 88.460 115.169 -2.190 1.00 54.09 C
ATOM 19 O6 G B 254 89.178 114.493 -1.441 1.00 54.72 O
ATOM 20 N1 G B 254 88.237 114.752 -3.499 1.00 54.93 N
ATOM 21 C2 G B 254 87.456 115.414 -4.418 1.00 54.84 C
ATOM 22 N2 G B 254 87.355 114.854 -5.630 1.00 54.67 N
ATOM 23 N3 G B 254 86.818 116.541 -4.165 1.00 54.29 N
ATOM 24 C4 G B 254 87.021 116.963 -2.899 1.00 53.80 C
ATOM 25 P G B 255 81.279 117.329 -1.940 1.00 56.34 P
ATOM 26 OP1 G B 255 79.832 117.608 -2.124 1.00 55.48 O
ATOM 27 OP2 G B 255 81.768 116.764 -0.655 1.00 57.98 O
ATOM 28 O5' G B 255 81.774 116.355 -3.103 1.00 56.71 O
TER
ATOM 2 P G A 237 84.812 123.662 -8.586 1.00 62.51 P
ATOM 3 OP1 G A 237 83.395 124.058 -8.791 1.00 59.54 O
ATOM 4 OP2 G A 237 85.898 124.565 -9.039 1.00 62.37 O
ATOM 5 O5' G A 237 85.038 123.379 -7.033 1.00 63.33 O
ATOM 6 C5' G A 237 84.256 122.393 -6.334 1.00 61.89 C
ATOM 7 C4' G A 237 84.394 122.578 -4.840 1.00 61.33 C
ATOM 8 O4' G A 237 85.787 122.429 -4.457 1.00 60.54 O
ATOM 9 C3' G A 237 84.005 123.944 -4.293 1.00 59.78 C
ATOM 10 O3' G A 237 82.592 124.037 -4.116 1.00 58.30 O
ATOM 11 C2' G A 237 84.760 123.983 -2.971 1.00 59.91 C
ATOM 12 O2' G A 237 84.114 123.251 -1.952 1.00 60.26 O
ATOM 13 C1' G A 237 86.058 123.258 -3.339 1.00 61.00 C
ATOM 14 N9 G A 237 87.151 124.167 -3.671 1.00 62.66 N
ATOM 15 C8 G A 237 87.669 124.442 -4.914 1.00 64.12 C
ATOM 16 N7 G A 237 88.638 125.318 -4.883 1.00 63.91 N
ATOM 17 C5 G A 237 88.768 125.639 -3.539 1.00 63.68 C
ATOM 18 C6 G A 237 89.648 126.541 -2.889 1.00 63.27 C
ATOM 19 O6 G A 237 90.512 127.272 -3.388 1.00 63.67 O
ATOM 20 N1 G A 237 89.446 126.549 -1.514 1.00 63.10 N
ATOM 21 C2 G A 237 88.515 125.795 -0.851 1.00 63.33 C
ATOM 22 N2 G A 237 88.473 125.933 0.476 1.00 63.59 N
ATOM 23 N3 G A 237 87.683 124.962 -1.444 1.00 64.39 N
ATOM 24 C4 G A 237 87.864 124.932 -2.777 1.00 63.91 C
ATOM 25 P C A 238 81.895 125.475 -3.916 1.00 59.18 P
ATOM 26 OP1 C A 238 80.424 125.259 -3.950 1.00 59.58 O
ATOM 27 OP2 C A 238 82.511 126.443 -4.855 1.00 59.06 O
ATOM 28 O5' C A 238 82.290 125.893 -2.430 1.00 60.19 O
TER
ATOM 1 O3' U B 253 85.646 121.463 2.181 1.00 47.60 O
ATOM 2 P G B 254 84.543 120.303 2.131 1.00 48.61 P
ATOM 3 OP1 G B 254 83.263 120.929 2.570 1.00 47.45 O
ATOM 4 OP2 G B 254 85.078 119.118 2.843 1.00 45.24 O
ATOM 5 O5' G B 254 84.447 119.904 0.588 1.00 50.86 O
ATOM 6 C5' G B 254 83.793 120.761 -0.367 1.00 53.05 C
ATOM 7 C4' G B 254 83.949 120.207 -1.768 1.00 54.44 C
ATOM 8 O4' G B 254 85.361 120.134 -2.111 1.00 53.75 O
ATOM 9 C3' G B 254 83.459 118.787 -2.001 1.00 54.29 C
ATOM 10 O3' G B 254 82.054 118.717 -2.202 1.00 55.87 O
ATOM 11 C2' G B 254 84.217 118.406 -3.261 1.00 54.48 C
ATOM 12 O2' G B 254 83.650 118.988 -4.419 1.00 55.23 O
ATOM 13 C1' G B 254 85.581 119.038 -2.983 1.00 53.28 C
ATOM 14 N9 G B 254 86.484 118.094 -2.331 1.00 53.43 N
ATOM 15 C8 G B 254 86.955 118.140 -1.042 1.00 53.02 C
ATOM 16 N7 G B 254 87.733 117.135 -0.746 1.00 52.18 N
ATOM 17 C5 G B 254 87.780 116.380 -1.908 1.00 53.21 C
ATOM 18 C6 G B 254 88.460 115.169 -2.190 1.00 54.09 C
ATOM 19 O6 G B 254 89.178 114.493 -1.441 1.00 54.72 O
ATOM 20 N1 G B 254 88.237 114.752 -3.499 1.00 54.93 N
ATOM 21 C2 G B 254 87.456 115.414 -4.418 1.00 54.84 C
ATOM 22 N2 G B 254 87.355 114.854 -5.630 1.00 54.67 N
ATOM 23 N3 G B 254 86.818 116.541 -4.165 1.00 54.29 N
ATOM 24 C4 G B 254 87.021 116.963 -2.899 1.00 53.80 C
ATOM 25 P G B 255 81.279 117.329 -1.940 1.00 56.34 P
ATOM 26 OP1 G B 255 79.832 117.608 -2.124 1.00 55.48 O
ATOM 27 OP2 G B 255 81.768 116.764 -0.655 1.00 57.98 O
ATOM 28 O5' G B 255 81.774 116.355 -3.103 1.00 56.71 O
TER
Atoms:
OP1: (83.395,124.058,-8.791)
OP2: (85.898,124.565,-9.039)
C3': (84.005,123.944,-4.293)
C1': (86.058,123.258,-3.339)
C5': (84.256,122.393,-6.334)
O6: (90.512,127.272,-3.388)
O4': (85.787,122.429,-4.457)
C8: (87.669,124.442,-4.914)
C2: (88.515,125.795,-0.851)
C6: (89.648,126.541,-2.889)
C5: (88.768,125.639,-3.539)
C4: (87.864,124.932,-2.777)
P: (84.812,123.662,-8.586)
C4': (84.394,122.578,-4.840)
C2': (84.760,123.983,-2.971)
O2': (84.114,123.251,-1.952)
N1: (89.446,126.549,-1.514)
N2: (88.473,125.933,0.476)
N3: (87.683,124.962,-1.444)
N7: (88.638,125.318,-4.883)
N9: (87.151,124.167,-3.671)
O5': (85.038,123.379,-7.033)
O3': (82.592,124.037,-4.116)
OP2: (85.898,124.565,-9.039)
C3': (84.005,123.944,-4.293)
C1': (86.058,123.258,-3.339)
C5': (84.256,122.393,-6.334)
O6: (90.512,127.272,-3.388)
O4': (85.787,122.429,-4.457)
C8: (87.669,124.442,-4.914)
C2: (88.515,125.795,-0.851)
C6: (89.648,126.541,-2.889)
C5: (88.768,125.639,-3.539)
C4: (87.864,124.932,-2.777)
P: (84.812,123.662,-8.586)
C4': (84.394,122.578,-4.840)
C2': (84.760,123.983,-2.971)
O2': (84.114,123.251,-1.952)
N1: (89.446,126.549,-1.514)
N2: (88.473,125.933,0.476)
N3: (87.683,124.962,-1.444)
N7: (88.638,125.318,-4.883)
N9: (87.151,124.167,-3.671)
O5': (85.038,123.379,-7.033)
O3': (82.592,124.037,-4.116)
OP1: (83.263,120.929,2.570)
OP2: (85.078,119.118,2.843)
C3': (83.459,118.787,-2.001)
C1': (85.581,119.038,-2.983)
C5': (83.793,120.761,-0.367)
O6: (89.178,114.493,-1.441)
O4': (85.361,120.134,-2.111)
C8: (86.955,118.140,-1.042)
C2: (87.456,115.414,-4.418)
C6: (88.460,115.169,-2.190)
C5: (87.780,116.380,-1.908)
C4: (87.021,116.963,-2.899)
P: (84.543,120.303,2.131)
C4': (83.949,120.207,-1.768)
C2': (84.217,118.406,-3.261)
O2': (83.650,118.988,-4.419)
N1: (88.237,114.752,-3.499)
N2: (87.355,114.854,-5.630)
N3: (86.818,116.541,-4.165)
N7: (87.733,117.135,-0.746)
N9: (86.484,118.094,-2.331)
O5': (84.447,119.904,0.588)
O3': (82.054,118.717,-2.202)
OP2: (85.078,119.118,2.843)
C3': (83.459,118.787,-2.001)
C1': (85.581,119.038,-2.983)
C5': (83.793,120.761,-0.367)
O6: (89.178,114.493,-1.441)
O4': (85.361,120.134,-2.111)
C8: (86.955,118.140,-1.042)
C2: (87.456,115.414,-4.418)
C6: (88.460,115.169,-2.190)
C5: (87.780,116.380,-1.908)
C4: (87.021,116.963,-2.899)
P: (84.543,120.303,2.131)
C4': (83.949,120.207,-1.768)
C2': (84.217,118.406,-3.261)
O2': (83.650,118.988,-4.419)
N1: (88.237,114.752,-3.499)
N2: (87.355,114.854,-5.630)
N3: (86.818,116.541,-4.165)
N7: (87.733,117.135,-0.746)
N9: (86.484,118.094,-2.331)
O5': (84.447,119.904,0.588)
O3': (82.054,118.717,-2.202)
Image (generated by PyMOL):