Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.488 122.669 -9.104 1.00 48.30 O
ATOM 2 P G A 237 85.241 124.030 -8.286 1.00 53.60 P
ATOM 3 OP1 G A 237 83.793 124.363 -8.402 1.00 50.66 O
ATOM 4 OP2 G A 237 86.256 125.022 -8.713 1.00 52.93 O
ATOM 5 O5' G A 237 85.539 123.642 -6.769 1.00 54.27 O
ATOM 6 C5' G A 237 84.769 122.625 -6.100 1.00 53.19 C
ATOM 7 C4' G A 237 84.897 122.776 -4.605 1.00 52.34 C
ATOM 8 O4' G A 237 86.284 122.594 -4.219 1.00 52.90 O
ATOM 9 C3' G A 237 84.534 124.145 -4.052 1.00 51.18 C
ATOM 10 O3' G A 237 83.127 124.276 -3.873 1.00 50.18 O
ATOM 11 C2' G A 237 85.289 124.167 -2.732 1.00 51.42 C
ATOM 12 O2' G A 237 84.618 123.471 -1.705 1.00 51.56 O
ATOM 13 C1' G A 237 86.574 123.422 -3.105 1.00 52.30 C
ATOM 14 N9 G A 237 87.661 124.327 -3.461 1.00 53.42 N
ATOM 15 C8 G A 237 88.182 124.566 -4.710 1.00 54.82 C
ATOM 16 N7 G A 237 89.137 125.458 -4.704 1.00 55.26 N
ATOM 17 C5 G A 237 89.255 125.823 -3.369 1.00 55.28 C
ATOM 18 C6 G A 237 90.118 126.752 -2.744 1.00 55.22 C
ATOM 19 O6 G A 237 90.980 127.470 -3.259 1.00 57.08 O
ATOM 20 N1 G A 237 89.901 126.806 -1.372 1.00 55.17 N
ATOM 21 C2 G A 237 88.970 126.066 -0.692 1.00 54.25 C
ATOM 22 N2 G A 237 88.897 126.259 0.626 1.00 54.95 N
ATOM 23 N3 G A 237 88.164 125.199 -1.262 1.00 55.00 N
ATOM 24 C4 G A 237 88.357 125.128 -2.592 1.00 54.83 C
ATOM 25 P C A 238 82.477 125.732 -3.664 1.00 51.28 P
ATOM 26 OP1 C A 238 81.001 125.581 -3.709 1.00 50.11 O
ATOM 27 OP2 C A 238 83.142 126.684 -4.589 1.00 50.82 O
ATOM 28 O5' C A 238 82.894 126.125 -2.176 1.00 51.13 O
TER
ATOM 1 O3' U B 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 2 P G B 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 3 OP1 G B 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 4 OP2 G B 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 5 O5' G B 254 84.878 120.091 0.829 1.00 42.43 O
ATOM 6 C5' G B 254 84.237 120.949 -0.137 1.00 44.33 C
ATOM 7 C4' G B 254 84.438 120.421 -1.541 1.00 44.39 C
ATOM 8 O4' G B 254 85.857 120.373 -1.855 1.00 43.24 O
ATOM 9 C3' G B 254 83.970 119.001 -1.813 1.00 44.73 C
ATOM 10 O3' G B 254 82.571 118.919 -2.042 1.00 45.61 O
ATOM 11 C2' G B 254 84.758 118.659 -3.066 1.00 44.03 C
ATOM 12 O2' G B 254 84.215 119.279 -4.213 1.00 45.96 O
ATOM 13 C1' G B 254 86.110 119.291 -2.739 1.00 42.12 C
ATOM 14 N9 G B 254 86.982 118.333 -2.065 1.00 41.88 N
ATOM 15 C8 G B 254 87.411 118.366 -0.761 1.00 39.56 C
ATOM 16 N7 G B 254 88.168 117.353 -0.447 1.00 39.43 N
ATOM 17 C5 G B 254 88.245 116.605 -1.610 1.00 39.73 C
ATOM 18 C6 G B 254 88.924 115.391 -1.876 1.00 40.82 C
ATOM 19 O6 G B 254 89.597 114.700 -1.103 1.00 41.46 O
ATOM 20 N1 G B 254 88.754 114.989 -3.197 1.00 41.54 N
ATOM 21 C2 G B 254 88.008 115.660 -4.136 1.00 41.99 C
ATOM 22 N2 G B 254 87.957 115.116 -5.356 1.00 42.18 N
ATOM 23 N3 G B 254 87.358 116.784 -3.895 1.00 41.85 N
ATOM 24 C4 G B 254 87.524 117.198 -2.621 1.00 41.41 C
ATOM 25 P G B 255 81.801 117.536 -1.761 1.00 45.84 P
ATOM 26 OP1 G B 255 80.354 117.820 -1.934 1.00 44.69 O
ATOM 27 OP2 G B 255 82.292 116.965 -0.483 1.00 46.29 O
ATOM 28 O5' G B 255 82.286 116.559 -2.924 1.00 46.24 O
TER
ATOM 2 P G A 237 85.241 124.030 -8.286 1.00 53.60 P
ATOM 3 OP1 G A 237 83.793 124.363 -8.402 1.00 50.66 O
ATOM 4 OP2 G A 237 86.256 125.022 -8.713 1.00 52.93 O
ATOM 5 O5' G A 237 85.539 123.642 -6.769 1.00 54.27 O
ATOM 6 C5' G A 237 84.769 122.625 -6.100 1.00 53.19 C
ATOM 7 C4' G A 237 84.897 122.776 -4.605 1.00 52.34 C
ATOM 8 O4' G A 237 86.284 122.594 -4.219 1.00 52.90 O
ATOM 9 C3' G A 237 84.534 124.145 -4.052 1.00 51.18 C
ATOM 10 O3' G A 237 83.127 124.276 -3.873 1.00 50.18 O
ATOM 11 C2' G A 237 85.289 124.167 -2.732 1.00 51.42 C
ATOM 12 O2' G A 237 84.618 123.471 -1.705 1.00 51.56 O
ATOM 13 C1' G A 237 86.574 123.422 -3.105 1.00 52.30 C
ATOM 14 N9 G A 237 87.661 124.327 -3.461 1.00 53.42 N
ATOM 15 C8 G A 237 88.182 124.566 -4.710 1.00 54.82 C
ATOM 16 N7 G A 237 89.137 125.458 -4.704 1.00 55.26 N
ATOM 17 C5 G A 237 89.255 125.823 -3.369 1.00 55.28 C
ATOM 18 C6 G A 237 90.118 126.752 -2.744 1.00 55.22 C
ATOM 19 O6 G A 237 90.980 127.470 -3.259 1.00 57.08 O
ATOM 20 N1 G A 237 89.901 126.806 -1.372 1.00 55.17 N
ATOM 21 C2 G A 237 88.970 126.066 -0.692 1.00 54.25 C
ATOM 22 N2 G A 237 88.897 126.259 0.626 1.00 54.95 N
ATOM 23 N3 G A 237 88.164 125.199 -1.262 1.00 55.00 N
ATOM 24 C4 G A 237 88.357 125.128 -2.592 1.00 54.83 C
ATOM 25 P C A 238 82.477 125.732 -3.664 1.00 51.28 P
ATOM 26 OP1 C A 238 81.001 125.581 -3.709 1.00 50.11 O
ATOM 27 OP2 C A 238 83.142 126.684 -4.589 1.00 50.82 O
ATOM 28 O5' C A 238 82.894 126.125 -2.176 1.00 51.13 O
TER
ATOM 1 O3' U B 253 86.108 121.711 2.335 1.00 39.74 O
ATOM 2 P G B 254 85.018 120.537 2.355 1.00 41.23 P
ATOM 3 OP1 G B 254 83.727 121.151 2.789 1.00 39.69 O
ATOM 4 OP2 G B 254 85.590 119.392 3.109 1.00 37.36 O
ATOM 5 O5' G B 254 84.878 120.091 0.829 1.00 42.43 O
ATOM 6 C5' G B 254 84.237 120.949 -0.137 1.00 44.33 C
ATOM 7 C4' G B 254 84.438 120.421 -1.541 1.00 44.39 C
ATOM 8 O4' G B 254 85.857 120.373 -1.855 1.00 43.24 O
ATOM 9 C3' G B 254 83.970 119.001 -1.813 1.00 44.73 C
ATOM 10 O3' G B 254 82.571 118.919 -2.042 1.00 45.61 O
ATOM 11 C2' G B 254 84.758 118.659 -3.066 1.00 44.03 C
ATOM 12 O2' G B 254 84.215 119.279 -4.213 1.00 45.96 O
ATOM 13 C1' G B 254 86.110 119.291 -2.739 1.00 42.12 C
ATOM 14 N9 G B 254 86.982 118.333 -2.065 1.00 41.88 N
ATOM 15 C8 G B 254 87.411 118.366 -0.761 1.00 39.56 C
ATOM 16 N7 G B 254 88.168 117.353 -0.447 1.00 39.43 N
ATOM 17 C5 G B 254 88.245 116.605 -1.610 1.00 39.73 C
ATOM 18 C6 G B 254 88.924 115.391 -1.876 1.00 40.82 C
ATOM 19 O6 G B 254 89.597 114.700 -1.103 1.00 41.46 O
ATOM 20 N1 G B 254 88.754 114.989 -3.197 1.00 41.54 N
ATOM 21 C2 G B 254 88.008 115.660 -4.136 1.00 41.99 C
ATOM 22 N2 G B 254 87.957 115.116 -5.356 1.00 42.18 N
ATOM 23 N3 G B 254 87.358 116.784 -3.895 1.00 41.85 N
ATOM 24 C4 G B 254 87.524 117.198 -2.621 1.00 41.41 C
ATOM 25 P G B 255 81.801 117.536 -1.761 1.00 45.84 P
ATOM 26 OP1 G B 255 80.354 117.820 -1.934 1.00 44.69 O
ATOM 27 OP2 G B 255 82.292 116.965 -0.483 1.00 46.29 O
ATOM 28 O5' G B 255 82.286 116.559 -2.924 1.00 46.24 O
TER
Atoms:
OP1: (83.793,124.363,-8.402)
OP2: (86.256,125.022,-8.713)
C3': (84.534,124.145,-4.052)
C1': (86.574,123.422,-3.105)
C5': (84.769,122.625,-6.100)
O6: (90.980,127.470,-3.259)
O4': (86.284,122.594,-4.219)
C8: (88.182,124.566,-4.710)
C2: (88.970,126.066,-0.692)
C6: (90.118,126.752,-2.744)
C5: (89.255,125.823,-3.369)
C4: (88.357,125.128,-2.592)
P: (85.241,124.030,-8.286)
C4': (84.897,122.776,-4.605)
C2': (85.289,124.167,-2.732)
O2': (84.618,123.471,-1.705)
N1: (89.901,126.806,-1.372)
N2: (88.897,126.259,0.626)
N3: (88.164,125.199,-1.262)
N7: (89.137,125.458,-4.704)
N9: (87.661,124.327,-3.461)
O5': (85.539,123.642,-6.769)
O3': (83.127,124.276,-3.873)
OP2: (86.256,125.022,-8.713)
C3': (84.534,124.145,-4.052)
C1': (86.574,123.422,-3.105)
C5': (84.769,122.625,-6.100)
O6: (90.980,127.470,-3.259)
O4': (86.284,122.594,-4.219)
C8: (88.182,124.566,-4.710)
C2: (88.970,126.066,-0.692)
C6: (90.118,126.752,-2.744)
C5: (89.255,125.823,-3.369)
C4: (88.357,125.128,-2.592)
P: (85.241,124.030,-8.286)
C4': (84.897,122.776,-4.605)
C2': (85.289,124.167,-2.732)
O2': (84.618,123.471,-1.705)
N1: (89.901,126.806,-1.372)
N2: (88.897,126.259,0.626)
N3: (88.164,125.199,-1.262)
N7: (89.137,125.458,-4.704)
N9: (87.661,124.327,-3.461)
O5': (85.539,123.642,-6.769)
O3': (83.127,124.276,-3.873)
OP1: (83.727,121.151,2.789)
OP2: (85.590,119.392,3.109)
C3': (83.970,119.001,-1.813)
C1': (86.110,119.291,-2.739)
C5': (84.237,120.949,-0.137)
O6: (89.597,114.700,-1.103)
O4': (85.857,120.373,-1.855)
C8: (87.411,118.366,-0.761)
C2: (88.008,115.660,-4.136)
C6: (88.924,115.391,-1.876)
C5: (88.245,116.605,-1.610)
C4: (87.524,117.198,-2.621)
P: (85.018,120.537,2.355)
C4': (84.438,120.421,-1.541)
C2': (84.758,118.659,-3.066)
O2': (84.215,119.279,-4.213)
N1: (88.754,114.989,-3.197)
N2: (87.957,115.116,-5.356)
N3: (87.358,116.784,-3.895)
N7: (88.168,117.353,-0.447)
N9: (86.982,118.333,-2.065)
O5': (84.878,120.091,0.829)
O3': (82.571,118.919,-2.042)
OP2: (85.590,119.392,3.109)
C3': (83.970,119.001,-1.813)
C1': (86.110,119.291,-2.739)
C5': (84.237,120.949,-0.137)
O6: (89.597,114.700,-1.103)
O4': (85.857,120.373,-1.855)
C8: (87.411,118.366,-0.761)
C2: (88.008,115.660,-4.136)
C6: (88.924,115.391,-1.876)
C5: (88.245,116.605,-1.610)
C4: (87.524,117.198,-2.621)
P: (85.018,120.537,2.355)
C4': (84.438,120.421,-1.541)
C2': (84.758,118.659,-3.066)
O2': (84.215,119.279,-4.213)
N1: (88.754,114.989,-3.197)
N2: (87.957,115.116,-5.356)
N3: (87.358,116.784,-3.895)
N7: (88.168,117.353,-0.447)
N9: (86.982,118.333,-2.065)
O5': (84.878,120.091,0.829)
O3': (82.571,118.919,-2.042)
Image (generated by PyMOL):