Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 85.683 123.326 -8.981 1.00 62.91 O
ATOM 2 P G A 237 85.380 124.629 -8.089 1.00 67.25 P
ATOM 3 OP1 G A 237 83.918 124.889 -8.193 1.00 64.28 O
ATOM 4 OP2 G A 237 86.344 125.700 -8.451 1.00 66.95 O
ATOM 5 O5' G A 237 85.712 124.170 -6.600 1.00 67.82 O
ATOM 6 C5' G A 237 84.966 123.118 -5.966 1.00 66.66 C
ATOM 7 C4' G A 237 85.072 123.244 -4.471 1.00 66.01 C
ATOM 8 O4' G A 237 86.461 123.085 -4.079 1.00 65.91 O
ATOM 9 C3' G A 237 84.671 124.596 -3.903 1.00 64.69 C
ATOM 10 O3' G A 237 83.258 124.681 -3.726 1.00 64.01 O
ATOM 11 C2' G A 237 85.426 124.623 -2.584 1.00 65.25 C
ATOM 12 O2' G A 237 84.774 123.887 -1.573 1.00 66.48 O
ATOM 13 C1' G A 237 86.731 123.914 -2.965 1.00 66.30 C
ATOM 14 N9 G A 237 87.800 124.841 -3.321 1.00 67.60 N
ATOM 15 C8 G A 237 88.312 125.096 -4.572 1.00 68.64 C
ATOM 16 N7 G A 237 89.252 126.003 -4.564 1.00 68.94 N
ATOM 17 C5 G A 237 89.372 126.362 -3.228 1.00 68.81 C
ATOM 18 C6 G A 237 90.227 127.305 -2.598 1.00 68.73 C
ATOM 19 O6 G A 237 91.079 128.039 -3.113 1.00 68.89 O
ATOM 20 N1 G A 237 90.013 127.347 -1.224 1.00 68.46 N
ATOM 21 C2 G A 237 89.097 126.586 -0.543 1.00 67.10 C
ATOM 22 N2 G A 237 89.029 126.770 0.777 1.00 67.35 N
ATOM 23 N3 G A 237 88.301 125.708 -1.115 1.00 68.10 N
ATOM 24 C4 G A 237 88.488 125.649 -2.449 1.00 68.60 C
ATOM 25 P C A 238 82.560 126.115 -3.493 1.00 65.18 P
ATOM 26 OP1 C A 238 81.094 125.899 -3.437 1.00 64.99 O
ATOM 27 OP2 C A 238 83.117 127.086 -4.472 1.00 64.64 O
ATOM 28 O5' C A 238 83.044 126.542 -2.033 1.00 65.51 O
TER
ATOM 1 O3' U B 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 2 P G B 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 3 OP1 G B 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 4 OP2 G B 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 5 O5' G B 254 85.081 120.550 0.984 1.00 55.41 O
ATOM 6 C5' G B 254 84.433 121.401 0.022 1.00 56.66 C
ATOM 7 C4' G B 254 84.619 120.861 -1.378 1.00 57.20 C
ATOM 8 O4' G B 254 86.034 120.816 -1.712 1.00 56.07 O
ATOM 9 C3' G B 254 84.151 119.438 -1.627 1.00 57.93 C
ATOM 10 O3' G B 254 82.741 119.354 -1.823 1.00 59.98 O
ATOM 11 C2' G B 254 84.922 119.083 -2.889 1.00 57.30 C
ATOM 12 O2' G B 254 84.357 119.679 -4.042 1.00 57.29 O
ATOM 13 C1' G B 254 86.277 119.729 -2.592 1.00 55.60 C
ATOM 14 N9 G B 254 87.186 118.791 -1.938 1.00 54.74 N
ATOM 15 C8 G B 254 87.641 118.830 -0.645 1.00 53.97 C
ATOM 16 N7 G B 254 88.433 117.835 -0.352 1.00 54.90 N
ATOM 17 C5 G B 254 88.508 117.097 -1.523 1.00 54.75 C
ATOM 18 C6 G B 254 89.223 115.901 -1.817 1.00 56.83 C
ATOM 19 O6 G B 254 89.950 115.229 -1.072 1.00 58.50 O
ATOM 20 N1 G B 254 89.027 115.498 -3.131 1.00 57.26 N
ATOM 21 C2 G B 254 88.240 116.154 -4.047 1.00 57.79 C
ATOM 22 N2 G B 254 88.179 115.612 -5.273 1.00 58.28 N
ATOM 23 N3 G B 254 87.563 117.260 -3.783 1.00 56.52 N
ATOM 24 C4 G B 254 87.746 117.674 -2.512 1.00 55.04 C
ATOM 25 P G B 255 81.980 117.963 -1.552 1.00 59.15 P
ATOM 26 OP1 G B 255 80.527 118.215 -1.713 1.00 57.40 O
ATOM 27 OP2 G B 255 82.493 117.391 -0.280 1.00 60.77 O
ATOM 28 O5' G B 255 82.466 117.011 -2.735 1.00 59.85 O
TER
ATOM 2 P G A 237 85.380 124.629 -8.089 1.00 67.25 P
ATOM 3 OP1 G A 237 83.918 124.889 -8.193 1.00 64.28 O
ATOM 4 OP2 G A 237 86.344 125.700 -8.451 1.00 66.95 O
ATOM 5 O5' G A 237 85.712 124.170 -6.600 1.00 67.82 O
ATOM 6 C5' G A 237 84.966 123.118 -5.966 1.00 66.66 C
ATOM 7 C4' G A 237 85.072 123.244 -4.471 1.00 66.01 C
ATOM 8 O4' G A 237 86.461 123.085 -4.079 1.00 65.91 O
ATOM 9 C3' G A 237 84.671 124.596 -3.903 1.00 64.69 C
ATOM 10 O3' G A 237 83.258 124.681 -3.726 1.00 64.01 O
ATOM 11 C2' G A 237 85.426 124.623 -2.584 1.00 65.25 C
ATOM 12 O2' G A 237 84.774 123.887 -1.573 1.00 66.48 O
ATOM 13 C1' G A 237 86.731 123.914 -2.965 1.00 66.30 C
ATOM 14 N9 G A 237 87.800 124.841 -3.321 1.00 67.60 N
ATOM 15 C8 G A 237 88.312 125.096 -4.572 1.00 68.64 C
ATOM 16 N7 G A 237 89.252 126.003 -4.564 1.00 68.94 N
ATOM 17 C5 G A 237 89.372 126.362 -3.228 1.00 68.81 C
ATOM 18 C6 G A 237 90.227 127.305 -2.598 1.00 68.73 C
ATOM 19 O6 G A 237 91.079 128.039 -3.113 1.00 68.89 O
ATOM 20 N1 G A 237 90.013 127.347 -1.224 1.00 68.46 N
ATOM 21 C2 G A 237 89.097 126.586 -0.543 1.00 67.10 C
ATOM 22 N2 G A 237 89.029 126.770 0.777 1.00 67.35 N
ATOM 23 N3 G A 237 88.301 125.708 -1.115 1.00 68.10 N
ATOM 24 C4 G A 237 88.488 125.649 -2.449 1.00 68.60 C
ATOM 25 P C A 238 82.560 126.115 -3.493 1.00 65.18 P
ATOM 26 OP1 C A 238 81.094 125.899 -3.437 1.00 64.99 O
ATOM 27 OP2 C A 238 83.117 127.086 -4.472 1.00 64.64 O
ATOM 28 O5' C A 238 83.044 126.542 -2.033 1.00 65.51 O
TER
ATOM 1 O3' U B 253 86.217 122.155 2.570 1.00 53.14 O
ATOM 2 P G B 254 85.149 120.962 2.523 1.00 54.13 P
ATOM 3 OP1 G B 254 83.828 121.535 2.913 1.00 53.15 O
ATOM 4 OP2 G B 254 85.708 119.806 3.275 1.00 53.58 O
ATOM 5 O5' G B 254 85.081 120.550 0.984 1.00 55.41 O
ATOM 6 C5' G B 254 84.433 121.401 0.022 1.00 56.66 C
ATOM 7 C4' G B 254 84.619 120.861 -1.378 1.00 57.20 C
ATOM 8 O4' G B 254 86.034 120.816 -1.712 1.00 56.07 O
ATOM 9 C3' G B 254 84.151 119.438 -1.627 1.00 57.93 C
ATOM 10 O3' G B 254 82.741 119.354 -1.823 1.00 59.98 O
ATOM 11 C2' G B 254 84.922 119.083 -2.889 1.00 57.30 C
ATOM 12 O2' G B 254 84.357 119.679 -4.042 1.00 57.29 O
ATOM 13 C1' G B 254 86.277 119.729 -2.592 1.00 55.60 C
ATOM 14 N9 G B 254 87.186 118.791 -1.938 1.00 54.74 N
ATOM 15 C8 G B 254 87.641 118.830 -0.645 1.00 53.97 C
ATOM 16 N7 G B 254 88.433 117.835 -0.352 1.00 54.90 N
ATOM 17 C5 G B 254 88.508 117.097 -1.523 1.00 54.75 C
ATOM 18 C6 G B 254 89.223 115.901 -1.817 1.00 56.83 C
ATOM 19 O6 G B 254 89.950 115.229 -1.072 1.00 58.50 O
ATOM 20 N1 G B 254 89.027 115.498 -3.131 1.00 57.26 N
ATOM 21 C2 G B 254 88.240 116.154 -4.047 1.00 57.79 C
ATOM 22 N2 G B 254 88.179 115.612 -5.273 1.00 58.28 N
ATOM 23 N3 G B 254 87.563 117.260 -3.783 1.00 56.52 N
ATOM 24 C4 G B 254 87.746 117.674 -2.512 1.00 55.04 C
ATOM 25 P G B 255 81.980 117.963 -1.552 1.00 59.15 P
ATOM 26 OP1 G B 255 80.527 118.215 -1.713 1.00 57.40 O
ATOM 27 OP2 G B 255 82.493 117.391 -0.280 1.00 60.77 O
ATOM 28 O5' G B 255 82.466 117.011 -2.735 1.00 59.85 O
TER
Atoms:
OP1: (83.918,124.889,-8.193)
OP2: (86.344,125.700,-8.451)
C3': (84.671,124.596,-3.903)
C1': (86.731,123.914,-2.965)
C5': (84.966,123.118,-5.966)
O6: (91.079,128.039,-3.113)
O4': (86.461,123.085,-4.079)
C8: (88.312,125.096,-4.572)
C2: (89.097,126.586,-0.543)
C6: (90.227,127.305,-2.598)
C5: (89.372,126.362,-3.228)
C4: (88.488,125.649,-2.449)
P: (85.380,124.629,-8.089)
C4': (85.072,123.244,-4.471)
C2': (85.426,124.623,-2.584)
O2': (84.774,123.887,-1.573)
N1: (90.013,127.347,-1.224)
N2: (89.029,126.770,0.777)
N3: (88.301,125.708,-1.115)
N7: (89.252,126.003,-4.564)
N9: (87.800,124.841,-3.321)
O5': (85.712,124.170,-6.600)
O3': (83.258,124.681,-3.726)
OP2: (86.344,125.700,-8.451)
C3': (84.671,124.596,-3.903)
C1': (86.731,123.914,-2.965)
C5': (84.966,123.118,-5.966)
O6: (91.079,128.039,-3.113)
O4': (86.461,123.085,-4.079)
C8: (88.312,125.096,-4.572)
C2: (89.097,126.586,-0.543)
C6: (90.227,127.305,-2.598)
C5: (89.372,126.362,-3.228)
C4: (88.488,125.649,-2.449)
P: (85.380,124.629,-8.089)
C4': (85.072,123.244,-4.471)
C2': (85.426,124.623,-2.584)
O2': (84.774,123.887,-1.573)
N1: (90.013,127.347,-1.224)
N2: (89.029,126.770,0.777)
N3: (88.301,125.708,-1.115)
N7: (89.252,126.003,-4.564)
N9: (87.800,124.841,-3.321)
O5': (85.712,124.170,-6.600)
O3': (83.258,124.681,-3.726)
OP1: (83.828,121.535,2.913)
OP2: (85.708,119.806,3.275)
C3': (84.151,119.438,-1.627)
C1': (86.277,119.729,-2.592)
C5': (84.433,121.401,0.022)
O6: (89.950,115.229,-1.072)
O4': (86.034,120.816,-1.712)
C8: (87.641,118.830,-0.645)
C2: (88.240,116.154,-4.047)
C6: (89.223,115.901,-1.817)
C5: (88.508,117.097,-1.523)
C4: (87.746,117.674,-2.512)
P: (85.149,120.962,2.523)
C4': (84.619,120.861,-1.378)
C2': (84.922,119.083,-2.889)
O2': (84.357,119.679,-4.042)
N1: (89.027,115.498,-3.131)
N2: (88.179,115.612,-5.273)
N3: (87.563,117.260,-3.783)
N7: (88.433,117.835,-0.352)
N9: (87.186,118.791,-1.938)
O5': (85.081,120.550,0.984)
O3': (82.741,119.354,-1.823)
OP2: (85.708,119.806,3.275)
C3': (84.151,119.438,-1.627)
C1': (86.277,119.729,-2.592)
C5': (84.433,121.401,0.022)
O6: (89.950,115.229,-1.072)
O4': (86.034,120.816,-1.712)
C8: (87.641,118.830,-0.645)
C2: (88.240,116.154,-4.047)
C6: (89.223,115.901,-1.817)
C5: (88.508,117.097,-1.523)
C4: (87.746,117.674,-2.512)
P: (85.149,120.962,2.523)
C4': (84.619,120.861,-1.378)
C2': (84.922,119.083,-2.889)
O2': (84.357,119.679,-4.042)
N1: (89.027,115.498,-3.131)
N2: (88.179,115.612,-5.273)
N3: (87.563,117.260,-3.783)
N7: (88.433,117.835,-0.352)
N9: (87.186,118.791,-1.938)
O5': (85.081,120.550,0.984)
O3': (82.741,119.354,-1.823)
Image (generated by PyMOL):