Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0237:0254
Extra
PDB:
ATOM 1 O3' A A 236 86.023 123.424 -8.771 1.00 73.58 O
ATOM 2 P G A 237 85.686 124.701 -7.852 1.00 76.54 P
ATOM 3 OP1 G A 237 84.204 124.864 -7.886 1.00 73.91 O
ATOM 4 OP2 G A 237 86.559 125.832 -8.265 1.00 75.92 O
ATOM 5 O5' G A 237 86.142 124.275 -6.386 1.00 76.04 O
ATOM 6 C5' G A 237 85.486 123.211 -5.680 1.00 75.48 C
ATOM 7 C4' G A 237 85.611 123.427 -4.193 1.00 74.79 C
ATOM 8 O4' G A 237 87.009 123.370 -3.807 1.00 75.00 O
ATOM 9 C3' G A 237 85.153 124.786 -3.695 1.00 73.79 C
ATOM 10 O3' G A 237 83.745 124.839 -3.524 1.00 72.98 O
ATOM 11 C2' G A 237 85.895 124.912 -2.374 1.00 74.69 C
ATOM 12 O2' G A 237 85.268 124.221 -1.314 1.00 75.13 O
ATOM 13 C1' G A 237 87.231 124.248 -2.718 1.00 75.68 C
ATOM 14 N9 G A 237 88.261 125.220 -3.082 1.00 76.71 N
ATOM 15 C8 G A 237 88.704 125.555 -4.339 1.00 77.13 C
ATOM 16 N7 G A 237 89.613 126.494 -4.327 1.00 77.18 N
ATOM 17 C5 G A 237 89.785 126.791 -2.982 1.00 77.25 C
ATOM 18 C6 G A 237 90.632 127.734 -2.343 1.00 77.30 C
ATOM 19 O6 G A 237 91.426 128.531 -2.852 1.00 78.20 O
ATOM 20 N1 G A 237 90.488 127.695 -0.963 1.00 77.28 N
ATOM 21 C2 G A 237 89.643 126.860 -0.281 1.00 76.82 C
ATOM 22 N2 G A 237 89.656 126.953 1.050 1.00 77.26 N
ATOM 23 N3 G A 237 88.845 125.990 -0.860 1.00 77.58 N
ATOM 24 C4 G A 237 88.966 126.006 -2.202 1.00 77.34 C
ATOM 25 P C A 238 83.027 126.255 -3.297 1.00 72.71 P
ATOM 26 OP1 C A 238 81.566 126.025 -3.309 1.00 73.29 O
ATOM 27 OP2 C A 238 83.619 127.228 -4.243 1.00 72.99 O
ATOM 28 O5' C A 238 83.446 126.665 -1.815 1.00 73.51 O
TER
ATOM 1 O3' U B 253 86.468 122.461 2.704 1.00 64.24 O
ATOM 2 P G B 254 85.430 121.240 2.727 1.00 65.45 P
ATOM 3 OP1 G B 254 84.121 121.773 3.193 1.00 63.07 O
ATOM 4 OP2 G B 254 86.071 120.114 3.452 1.00 63.95 O
ATOM 5 O5' G B 254 85.296 120.817 1.194 1.00 66.66 O
ATOM 6 C5' G B 254 84.698 121.706 0.226 1.00 66.59 C
ATOM 7 C4' G B 254 84.861 121.160 -1.182 1.00 67.00 C
ATOM 8 O4' G B 254 86.265 121.150 -1.576 1.00 65.24 O
ATOM 9 C3' G B 254 84.402 119.731 -1.423 1.00 66.53 C
ATOM 10 O3' G B 254 82.984 119.644 -1.575 1.00 68.85 O
ATOM 11 C2' G B 254 85.148 119.392 -2.707 1.00 65.66 C
ATOM 12 O2' G B 254 84.564 119.998 -3.841 1.00 65.11 O
ATOM 13 C1' G B 254 86.503 120.056 -2.448 1.00 64.32 C
ATOM 14 N9 G B 254 87.434 119.139 -1.799 1.00 63.10 N
ATOM 15 C8 G B 254 87.904 119.213 -0.514 1.00 63.19 C
ATOM 16 N7 G B 254 88.704 118.231 -0.204 1.00 64.08 N
ATOM 17 C5 G B 254 88.772 117.464 -1.354 1.00 63.31 C
ATOM 18 C6 G B 254 89.488 116.265 -1.618 1.00 63.99 C
ATOM 19 O6 G B 254 90.217 115.620 -0.859 1.00 64.50 O
ATOM 20 N1 G B 254 89.289 115.827 -2.920 1.00 64.97 N
ATOM 21 C2 G B 254 88.500 116.457 -3.851 1.00 65.63 C
ATOM 22 N2 G B 254 88.455 115.889 -5.063 1.00 66.41 N
ATOM 23 N3 G B 254 87.811 117.565 -3.612 1.00 64.82 N
ATOM 24 C4 G B 254 87.999 118.013 -2.352 1.00 63.65 C
ATOM 25 P G B 255 82.228 118.245 -1.302 1.00 69.82 P
ATOM 26 OP1 G B 255 80.777 118.469 -1.517 1.00 69.66 O
ATOM 27 OP2 G B 255 82.698 117.691 -0.010 1.00 71.14 O
ATOM 28 O5' G B 255 82.742 117.285 -2.468 1.00 71.11 O
TER
ATOM 2 P G A 237 85.686 124.701 -7.852 1.00 76.54 P
ATOM 3 OP1 G A 237 84.204 124.864 -7.886 1.00 73.91 O
ATOM 4 OP2 G A 237 86.559 125.832 -8.265 1.00 75.92 O
ATOM 5 O5' G A 237 86.142 124.275 -6.386 1.00 76.04 O
ATOM 6 C5' G A 237 85.486 123.211 -5.680 1.00 75.48 C
ATOM 7 C4' G A 237 85.611 123.427 -4.193 1.00 74.79 C
ATOM 8 O4' G A 237 87.009 123.370 -3.807 1.00 75.00 O
ATOM 9 C3' G A 237 85.153 124.786 -3.695 1.00 73.79 C
ATOM 10 O3' G A 237 83.745 124.839 -3.524 1.00 72.98 O
ATOM 11 C2' G A 237 85.895 124.912 -2.374 1.00 74.69 C
ATOM 12 O2' G A 237 85.268 124.221 -1.314 1.00 75.13 O
ATOM 13 C1' G A 237 87.231 124.248 -2.718 1.00 75.68 C
ATOM 14 N9 G A 237 88.261 125.220 -3.082 1.00 76.71 N
ATOM 15 C8 G A 237 88.704 125.555 -4.339 1.00 77.13 C
ATOM 16 N7 G A 237 89.613 126.494 -4.327 1.00 77.18 N
ATOM 17 C5 G A 237 89.785 126.791 -2.982 1.00 77.25 C
ATOM 18 C6 G A 237 90.632 127.734 -2.343 1.00 77.30 C
ATOM 19 O6 G A 237 91.426 128.531 -2.852 1.00 78.20 O
ATOM 20 N1 G A 237 90.488 127.695 -0.963 1.00 77.28 N
ATOM 21 C2 G A 237 89.643 126.860 -0.281 1.00 76.82 C
ATOM 22 N2 G A 237 89.656 126.953 1.050 1.00 77.26 N
ATOM 23 N3 G A 237 88.845 125.990 -0.860 1.00 77.58 N
ATOM 24 C4 G A 237 88.966 126.006 -2.202 1.00 77.34 C
ATOM 25 P C A 238 83.027 126.255 -3.297 1.00 72.71 P
ATOM 26 OP1 C A 238 81.566 126.025 -3.309 1.00 73.29 O
ATOM 27 OP2 C A 238 83.619 127.228 -4.243 1.00 72.99 O
ATOM 28 O5' C A 238 83.446 126.665 -1.815 1.00 73.51 O
TER
ATOM 1 O3' U B 253 86.468 122.461 2.704 1.00 64.24 O
ATOM 2 P G B 254 85.430 121.240 2.727 1.00 65.45 P
ATOM 3 OP1 G B 254 84.121 121.773 3.193 1.00 63.07 O
ATOM 4 OP2 G B 254 86.071 120.114 3.452 1.00 63.95 O
ATOM 5 O5' G B 254 85.296 120.817 1.194 1.00 66.66 O
ATOM 6 C5' G B 254 84.698 121.706 0.226 1.00 66.59 C
ATOM 7 C4' G B 254 84.861 121.160 -1.182 1.00 67.00 C
ATOM 8 O4' G B 254 86.265 121.150 -1.576 1.00 65.24 O
ATOM 9 C3' G B 254 84.402 119.731 -1.423 1.00 66.53 C
ATOM 10 O3' G B 254 82.984 119.644 -1.575 1.00 68.85 O
ATOM 11 C2' G B 254 85.148 119.392 -2.707 1.00 65.66 C
ATOM 12 O2' G B 254 84.564 119.998 -3.841 1.00 65.11 O
ATOM 13 C1' G B 254 86.503 120.056 -2.448 1.00 64.32 C
ATOM 14 N9 G B 254 87.434 119.139 -1.799 1.00 63.10 N
ATOM 15 C8 G B 254 87.904 119.213 -0.514 1.00 63.19 C
ATOM 16 N7 G B 254 88.704 118.231 -0.204 1.00 64.08 N
ATOM 17 C5 G B 254 88.772 117.464 -1.354 1.00 63.31 C
ATOM 18 C6 G B 254 89.488 116.265 -1.618 1.00 63.99 C
ATOM 19 O6 G B 254 90.217 115.620 -0.859 1.00 64.50 O
ATOM 20 N1 G B 254 89.289 115.827 -2.920 1.00 64.97 N
ATOM 21 C2 G B 254 88.500 116.457 -3.851 1.00 65.63 C
ATOM 22 N2 G B 254 88.455 115.889 -5.063 1.00 66.41 N
ATOM 23 N3 G B 254 87.811 117.565 -3.612 1.00 64.82 N
ATOM 24 C4 G B 254 87.999 118.013 -2.352 1.00 63.65 C
ATOM 25 P G B 255 82.228 118.245 -1.302 1.00 69.82 P
ATOM 26 OP1 G B 255 80.777 118.469 -1.517 1.00 69.66 O
ATOM 27 OP2 G B 255 82.698 117.691 -0.010 1.00 71.14 O
ATOM 28 O5' G B 255 82.742 117.285 -2.468 1.00 71.11 O
TER
Atoms:
OP1: (84.204,124.864,-7.886)
OP2: (86.559,125.832,-8.265)
C3': (85.153,124.786,-3.695)
C1': (87.231,124.248,-2.718)
C5': (85.486,123.211,-5.680)
O6: (91.426,128.531,-2.852)
O4': (87.009,123.370,-3.807)
C8: (88.704,125.555,-4.339)
C2: (89.643,126.860,-0.281)
C6: (90.632,127.734,-2.343)
C5: (89.785,126.791,-2.982)
C4: (88.966,126.006,-2.202)
P: (85.686,124.701,-7.852)
C4': (85.611,123.427,-4.193)
C2': (85.895,124.912,-2.374)
O2': (85.268,124.221,-1.314)
N1: (90.488,127.695,-0.963)
N2: (89.656,126.953,1.050)
N3: (88.845,125.990,-0.860)
N7: (89.613,126.494,-4.327)
N9: (88.261,125.220,-3.082)
O5': (86.142,124.275,-6.386)
O3': (83.745,124.839,-3.524)
OP2: (86.559,125.832,-8.265)
C3': (85.153,124.786,-3.695)
C1': (87.231,124.248,-2.718)
C5': (85.486,123.211,-5.680)
O6: (91.426,128.531,-2.852)
O4': (87.009,123.370,-3.807)
C8: (88.704,125.555,-4.339)
C2: (89.643,126.860,-0.281)
C6: (90.632,127.734,-2.343)
C5: (89.785,126.791,-2.982)
C4: (88.966,126.006,-2.202)
P: (85.686,124.701,-7.852)
C4': (85.611,123.427,-4.193)
C2': (85.895,124.912,-2.374)
O2': (85.268,124.221,-1.314)
N1: (90.488,127.695,-0.963)
N2: (89.656,126.953,1.050)
N3: (88.845,125.990,-0.860)
N7: (89.613,126.494,-4.327)
N9: (88.261,125.220,-3.082)
O5': (86.142,124.275,-6.386)
O3': (83.745,124.839,-3.524)
OP1: (84.121,121.773,3.193)
OP2: (86.071,120.114,3.452)
C3': (84.402,119.731,-1.423)
C1': (86.503,120.056,-2.448)
C5': (84.698,121.706,0.226)
O6: (90.217,115.620,-0.859)
O4': (86.265,121.150,-1.576)
C8: (87.904,119.213,-0.514)
C2: (88.500,116.457,-3.851)
C6: (89.488,116.265,-1.618)
C5: (88.772,117.464,-1.354)
C4: (87.999,118.013,-2.352)
P: (85.430,121.240,2.727)
C4': (84.861,121.160,-1.182)
C2': (85.148,119.392,-2.707)
O2': (84.564,119.998,-3.841)
N1: (89.289,115.827,-2.920)
N2: (88.455,115.889,-5.063)
N3: (87.811,117.565,-3.612)
N7: (88.704,118.231,-0.204)
N9: (87.434,119.139,-1.799)
O5': (85.296,120.817,1.194)
O3': (82.984,119.644,-1.575)
OP2: (86.071,120.114,3.452)
C3': (84.402,119.731,-1.423)
C1': (86.503,120.056,-2.448)
C5': (84.698,121.706,0.226)
O6: (90.217,115.620,-0.859)
O4': (86.265,121.150,-1.576)
C8: (87.904,119.213,-0.514)
C2: (88.500,116.457,-3.851)
C6: (89.488,116.265,-1.618)
C5: (88.772,117.464,-1.354)
C4: (87.999,118.013,-2.352)
P: (85.430,121.240,2.727)
C4': (84.861,121.160,-1.182)
C2': (85.148,119.392,-2.707)
O2': (84.564,119.998,-3.841)
N1: (89.289,115.827,-2.920)
N2: (88.455,115.889,-5.063)
N3: (87.811,117.565,-3.612)
N7: (88.704,118.231,-0.204)
N9: (87.434,119.139,-1.799)
O5': (85.296,120.817,1.194)
O3': (82.984,119.644,-1.575)
Image (generated by PyMOL):