ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1604:11376

Extra

PDB:
ATOM 1 O3' G A 603 63.593 -6.449 78.965 1.00 32.99 O
ATOM 2 P A A 604 64.526 -7.507 79.762 1.00 35.66 P
ATOM 3 OP1 A A 604 63.997 -7.656 81.141 1.00 35.75 O
ATOM 4 OP2 A A 604 65.888 -7.118 79.585 1.00 35.80 O
ATOM 5 O5' A A 604 64.243 -8.830 78.957 1.00 35.54 O
ATOM 6 C5' A A 604 63.445 -9.866 79.523 1.00 35.52 C
ATOM 7 C4' A A 604 62.436 -10.377 78.545 1.00 35.33 C
ATOM 8 O4' A A 604 61.532 -9.329 78.225 1.00 35.20 O
ATOM 9 C3' A A 604 62.963 -10.858 77.206 1.00 35.26 C
ATOM 10 O3' A A 604 63.370 -12.212 77.294 1.00 35.34 O
ATOM 11 C2' A A 604 61.763 -10.660 76.309 1.00 35.06 C
ATOM 12 O2' A A 604 60.857 -11.721 76.483 1.00 35.01 O
ATOM 13 C1' A A 604 61.124 -9.425 76.910 1.00 35.04 C
ATOM 14 N9 A A 604 61.521 -8.193 76.234 1.00 35.02 N
ATOM 15 C8 A A 604 62.738 -7.557 76.329 1.00 35.14 C
ATOM 16 N7 A A 604 62.769 -6.482 75.595 1.00 35.09 N
ATOM 17 C5 A A 604 61.488 -6.406 74.997 1.00 34.93 C
ATOM 18 C6 A A 604 60.856 -5.515 74.124 1.00 34.82 C
ATOM 19 N6 A A 604 61.391 -4.467 73.627 1.00 34.85 N
ATOM 20 N1 A A 604 59.611 -5.709 73.744 1.00 34.68 N
ATOM 21 C2 A A 604 58.982 -6.790 74.210 1.00 34.65 C
ATOM 22 N3 A A 604 59.432 -7.696 75.062 1.00 34.74 N
ATOM 23 C4 A A 604 60.703 -7.448 75.421 1.00 34.88 C
ATOM 24 P G A 605 64.289 -12.927 76.196 1.00 33.33 P
ATOM 25 OP1 G A 605 65.685 -12.793 76.668 1.00 33.53 O
ATOM 26 OP2 G A 605 63.931 -12.415 74.891 1.00 33.18 O
ATOM 27 O5' G A 605 63.829 -14.429 76.325 1.00 33.35 O
TER

ATOM 1 O3' G B1375 71.615 -3.460 71.918 1.00 30.24 O
ATOM 2 P C B1376 70.987 -2.022 72.135 1.00 34.53 P
ATOM 3 OP1 C B1376 71.910 -1.068 71.426 1.00 34.65 O
ATOM 4 OP2 C B1376 70.747 -1.854 73.592 1.00 34.61 O
ATOM 5 O5' C B1376 69.592 -2.115 71.369 1.00 34.30 O
ATOM 6 C5' C B1376 69.508 -1.981 69.959 1.00 34.22 C
ATOM 7 C4' C B1376 68.088 -1.748 69.500 1.00 34.03 C
ATOM 8 O4' C B1376 67.200 -2.689 70.173 1.00 33.93 O
ATOM 9 C3' C B1376 67.512 -0.364 69.795 1.00 34.04 C
ATOM 10 O3' C B1376 66.515 -0.040 68.816 1.00 33.90 O
ATOM 11 C2' C B1376 66.812 -0.611 71.127 1.00 34.02 C
ATOM 12 O2' C B1376 65.819 0.305 71.438 1.00 33.97 O
ATOM 13 C1' C B1376 66.218 -1.970 70.897 1.00 33.89 C
ATOM 14 N1 C B1376 65.913 -2.705 72.138 1.00 33.90 N
ATOM 15 C2 C B1376 64.648 -3.202 72.356 1.00 33.76 C
ATOM 16 O2 C B1376 63.819 -3.014 71.523 1.00 33.64 O
ATOM 17 N3 C B1376 64.317 -3.883 73.430 1.00 33.78 N
ATOM 18 C4 C B1376 65.235 -4.111 74.353 1.00 33.94 C
ATOM 19 N4 C B1376 64.911 -4.816 75.444 1.00 33.97 N
ATOM 20 C5 C B1376 66.549 -3.627 74.178 1.00 34.08 C
ATOM 21 C6 C B1376 66.848 -2.952 73.071 1.00 34.06 C
ATOM 22 P A B1377 66.895 0.466 67.330 1.00 30.58 P
ATOM 23 OP1 A B1377 66.327 -0.486 66.355 1.00 30.45 O
ATOM 24 OP2 A B1377 68.326 0.740 67.314 1.00 30.76 O
ATOM 25 O5' A B1377 66.083 1.813 67.217 1.00 30.57 O
TER

Atoms:
OP1: (63.997,-7.656,81.141)
OP2: (65.888,-7.118,79.585)
C3': (62.963,-10.858,77.206)
C1': (61.124,-9.425,76.910)
C5': (63.445,-9.866,79.523)
O4': (61.532,-9.329,78.225)
C8: (62.738,-7.557,76.329)
O2': (60.857,-11.721,76.483)
C6: (60.856,-5.515,74.124)
C5: (61.488,-6.406,74.997)
C4: (60.703,-7.448,75.421)
P: (64.526,-7.507,79.762)
C4': (62.436,-10.377,78.545)
C2': (61.763,-10.660,76.309)
C2: (58.982,-6.790,74.210)
N1: (59.611,-5.709,73.744)
N3: (59.432,-7.696,75.062)
N6: (61.391,-4.467,73.627)
N7: (62.769,-6.482,75.595)
N9: (61.521,-8.193,76.234)
O5': (64.243,-8.830,78.957)
O3': (63.370,-12.212,77.294)
C2: (64.648,-3.202,72.356)
OP1: (71.910,-1.068,71.426)
OP2: (70.747,-1.854,73.592)
C4: (65.235,-4.111,74.353)
O5': (69.592,-2.115,71.369)
C3': (67.512,-0.364,69.795)
C1': (66.218,-1.970,70.897)
O4': (67.200,-2.689,70.173)
C5': (69.508,-1.981,69.959)
P: (70.987,-2.022,72.135)
O2: (63.819,-3.014,71.523)
C4': (68.088,-1.748,69.500)
C2': (66.812,-0.611,71.127)
O2': (65.819,0.305,71.438)
N1: (65.913,-2.705,72.138)
N3: (64.317,-3.883,73.430)
N4: (64.911,-4.816,75.444)
C6: (66.848,-2.952,73.071)
C5: (66.549,-3.627,74.178)
O3': (66.515,-0.040,68.816)
Image (generated by PyMOL):
PyMOL image
show in jmol