ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QA4:0237:0254

Extra

PDB:
ATOM 1 O3' A A 236 86.026 123.785 -8.048 1.00 83.83 O
ATOM 2 P G A 237 85.738 125.155 -7.243 1.00 83.42 P
ATOM 3 OP1 G A 237 84.266 125.362 -7.187 1.00 83.21 O
ATOM 4 OP2 G A 237 86.595 126.225 -7.810 1.00 83.13 O
ATOM 5 O5' G A 237 86.258 124.843 -5.767 1.00 83.47 O
ATOM 6 C5' G A 237 85.809 123.673 -5.043 1.00 81.72 C
ATOM 7 C4' G A 237 85.942 123.901 -3.555 1.00 80.09 C
ATOM 8 O4' G A 237 87.341 123.895 -3.156 1.00 79.80 O
ATOM 9 C3' G A 237 85.456 125.258 -3.093 1.00 78.73 C
ATOM 10 O3' G A 237 84.055 125.329 -2.973 1.00 76.29 O
ATOM 11 C2' G A 237 86.172 125.426 -1.765 1.00 79.20 C
ATOM 12 O2' G A 237 85.573 124.710 -0.709 1.00 78.63 O
ATOM 13 C1' G A 237 87.532 124.816 -2.094 1.00 79.68 C
ATOM 14 N9 G A 237 88.482 125.835 -2.521 1.00 80.84 N
ATOM 15 C8 G A 237 88.885 126.128 -3.800 1.00 80.60 C
ATOM 16 N7 G A 237 89.775 127.084 -3.849 1.00 81.47 N
ATOM 17 C5 G A 237 89.969 127.443 -2.520 1.00 81.20 C
ATOM 18 C6 G A 237 90.836 128.413 -1.937 1.00 80.11 C
ATOM 19 O6 G A 237 91.649 129.158 -2.492 1.00 79.46 O
ATOM 20 N1 G A 237 90.693 128.458 -0.557 1.00 80.29 N
ATOM 21 C2 G A 237 89.838 127.670 0.175 1.00 81.39 C
ATOM 22 N2 G A 237 89.824 127.870 1.497 1.00 81.02 N
ATOM 23 N3 G A 237 89.047 126.755 -0.350 1.00 82.10 N
ATOM 24 C4 G A 237 89.163 126.695 -1.692 1.00 81.77 C
ATOM 25 P C A 238 83.361 126.763 -2.927 1.00 74.77 P
ATOM 26 OP1 C A 238 81.896 126.547 -3.026 1.00 74.13 O
ATOM 27 OP2 C A 238 84.050 127.626 -3.919 1.00 73.70 O
ATOM 28 O5' C A 238 83.716 127.287 -1.468 1.00 75.87 O
TER

ATOM 1 O3' U B 253 86.871 123.031 3.414 1.00 66.40 O
ATOM 2 P G B 254 85.793 121.845 3.282 1.00 69.45 P
ATOM 3 OP1 G B 254 84.475 122.451 3.625 1.00 67.70 O
ATOM 4 OP2 G B 254 86.284 120.650 4.035 1.00 67.16 O
ATOM 5 O5' G B 254 85.806 121.471 1.728 1.00 70.46 O
ATOM 6 C5' G B 254 85.190 122.337 0.747 1.00 72.22 C
ATOM 7 C4' G B 254 85.357 121.782 -0.660 1.00 72.68 C
ATOM 8 O4' G B 254 86.762 121.752 -1.034 1.00 72.91 O
ATOM 9 C3' G B 254 84.877 120.364 -0.931 1.00 72.88 C
ATOM 10 O3' G B 254 83.468 120.293 -1.132 1.00 73.16 O
ATOM 11 C2' G B 254 85.629 120.035 -2.211 1.00 73.15 C
ATOM 12 O2' G B 254 85.058 120.679 -3.334 1.00 73.47 O
ATOM 13 C1' G B 254 86.989 120.672 -1.926 1.00 73.14 C
ATOM 14 N9 G B 254 87.888 119.732 -1.274 1.00 73.97 N
ATOM 15 C8 G B 254 88.336 119.787 0.018 1.00 75.18 C
ATOM 16 N7 G B 254 89.143 118.810 0.321 1.00 76.08 N
ATOM 17 C5 G B 254 89.233 118.067 -0.844 1.00 76.44 C
ATOM 18 C6 G B 254 89.982 116.894 -1.132 1.00 77.88 C
ATOM 19 O6 G B 254 90.752 116.271 -0.394 1.00 80.13 O
ATOM 20 N1 G B 254 89.774 116.460 -2.431 1.00 77.50 N
ATOM 21 C2 G B 254 88.963 117.075 -3.341 1.00 77.94 C
ATOM 22 N2 G B 254 88.885 116.485 -4.540 1.00 79.21 N
ATOM 23 N3 G B 254 88.274 118.182 -3.094 1.00 77.33 N
ATOM 24 C4 G B 254 88.455 118.617 -1.834 1.00 75.52 C
ATOM 25 P G B 255 82.694 118.905 -0.878 1.00 73.43 P
ATOM 26 OP1 G B 255 81.262 119.148 -1.169 1.00 72.39 O
ATOM 27 OP2 G B 255 83.088 118.396 0.449 1.00 74.08 O
ATOM 28 O5' G B 255 83.285 117.897 -1.969 1.00 75.48 O
TER

Atoms:
OP1: (84.266,125.362,-7.187)
OP2: (86.595,126.225,-7.810)
C3': (85.456,125.258,-3.093)
C1': (87.532,124.816,-2.094)
C5': (85.809,123.673,-5.043)
O6: (91.649,129.158,-2.492)
O4': (87.341,123.895,-3.156)
C8: (88.885,126.128,-3.800)
C2: (89.838,127.670,0.175)
C6: (90.836,128.413,-1.937)
C5: (89.969,127.443,-2.520)
C4: (89.163,126.695,-1.692)
P: (85.738,125.155,-7.243)
C4': (85.942,123.901,-3.555)
C2': (86.172,125.426,-1.765)
O2': (85.573,124.710,-0.709)
N1: (90.693,128.458,-0.557)
N2: (89.824,127.870,1.497)
N3: (89.047,126.755,-0.350)
N7: (89.775,127.084,-3.849)
N9: (88.482,125.835,-2.521)
O5': (86.258,124.843,-5.767)
O3': (84.055,125.329,-2.973)
OP1: (84.475,122.451,3.625)
OP2: (86.284,120.650,4.035)
C3': (84.877,120.364,-0.931)
C1': (86.989,120.672,-1.926)
C5': (85.190,122.337,0.747)
O6: (90.752,116.271,-0.394)
O4': (86.762,121.752,-1.034)
C8: (88.336,119.787,0.018)
C2: (88.963,117.075,-3.341)
C6: (89.982,116.894,-1.132)
C5: (89.233,118.067,-0.844)
C4: (88.455,118.617,-1.834)
P: (85.793,121.845,3.282)
C4': (85.357,121.782,-0.660)
C2': (85.629,120.035,-2.211)
O2': (85.058,120.679,-3.334)
N1: (89.774,116.460,-2.431)
N2: (88.885,116.485,-4.540)
N3: (88.274,118.182,-3.094)
N7: (89.143,118.810,0.321)
N9: (87.888,119.732,-1.274)
O5': (85.806,121.471,1.728)
O3': (83.468,120.293,-1.132)
Image (generated by PyMOL):
PyMOL image
show in jmol