ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CC4:0237:0254

Extra

PDB:
ATOM 1 O3' A A 236 85.319 122.805 -9.169 1.00 52.59 O
ATOM 2 P G A 237 85.039 124.141 -8.316 1.00 56.60 P
ATOM 3 OP1 G A 237 83.589 124.454 -8.415 1.00 54.34 O
ATOM 4 OP2 G A 237 86.035 125.168 -8.705 1.00 56.60 O
ATOM 5 O5' G A 237 85.348 123.713 -6.813 1.00 57.71 O
ATOM 6 C5' G A 237 84.551 122.722 -6.146 1.00 56.13 C
ATOM 7 C4' G A 237 84.690 122.870 -4.654 1.00 55.66 C
ATOM 8 O4' G A 237 86.083 122.694 -4.282 1.00 55.68 O
ATOM 9 C3' G A 237 84.339 124.241 -4.101 1.00 54.49 C
ATOM 10 O3' G A 237 82.934 124.392 -3.931 1.00 53.86 O
ATOM 11 C2' G A 237 85.097 124.259 -2.781 1.00 54.79 C
ATOM 12 O2' G A 237 84.444 123.561 -1.745 1.00 54.76 O
ATOM 13 C1' G A 237 86.377 123.512 -3.161 1.00 56.44 C
ATOM 14 N9 G A 237 87.456 124.428 -3.510 1.00 58.75 N
ATOM 15 C8 G A 237 88.006 124.654 -4.749 1.00 60.43 C
ATOM 16 N7 G A 237 88.950 125.557 -4.732 1.00 61.23 N
ATOM 17 C5 G A 237 89.026 125.946 -3.401 1.00 60.98 C
ATOM 18 C6 G A 237 89.859 126.899 -2.768 1.00 61.15 C
ATOM 19 O6 G A 237 90.724 127.622 -3.273 1.00 62.27 O
ATOM 20 N1 G A 237 89.604 126.972 -1.403 1.00 61.05 N
ATOM 21 C2 G A 237 88.666 126.229 -0.735 1.00 59.94 C
ATOM 22 N2 G A 237 88.565 126.435 0.583 1.00 58.93 N
ATOM 23 N3 G A 237 87.883 125.346 -1.313 1.00 60.62 N
ATOM 24 C4 G A 237 88.115 125.255 -2.637 1.00 60.17 C
ATOM 25 P C A 238 82.311 125.854 -3.679 1.00 54.25 P
ATOM 26 OP1 C A 238 80.832 125.717 -3.649 1.00 52.80 O
ATOM 27 OP2 C A 238 82.938 126.817 -4.623 1.00 52.94 O
ATOM 28 O5' C A 238 82.798 126.216 -2.205 1.00 54.73 O
TER

ATOM 1 O3' U B 253 85.871 121.842 2.321 1.00 45.53 O
ATOM 2 P G B 254 84.801 120.648 2.387 1.00 47.23 P
ATOM 3 OP1 G B 254 83.512 121.231 2.860 1.00 45.66 O
ATOM 4 OP2 G B 254 85.416 119.508 3.117 1.00 45.64 O
ATOM 5 O5' G B 254 84.627 120.193 0.870 1.00 47.70 O
ATOM 6 C5' G B 254 83.992 121.056 -0.087 1.00 47.35 C
ATOM 7 C4' G B 254 84.205 120.542 -1.490 1.00 46.63 C
ATOM 8 O4' G B 254 85.627 120.505 -1.791 1.00 45.75 O
ATOM 9 C3' G B 254 83.755 119.122 -1.780 1.00 46.63 C
ATOM 10 O3' G B 254 82.350 119.021 -1.987 1.00 48.17 O
ATOM 11 C2' G B 254 84.537 118.819 -3.047 1.00 45.85 C
ATOM 12 O2' G B 254 83.981 119.472 -4.172 1.00 44.32 O
ATOM 13 C1' G B 254 85.887 119.456 -2.712 1.00 45.83 C
ATOM 14 N9 G B 254 86.793 118.498 -2.083 1.00 45.81 N
ATOM 15 C8 G B 254 87.258 118.520 -0.793 1.00 46.79 C
ATOM 16 N7 G B 254 88.035 117.510 -0.511 1.00 47.10 N
ATOM 17 C5 G B 254 88.091 116.778 -1.687 1.00 46.72 C
ATOM 18 C6 G B 254 88.780 115.575 -1.988 1.00 47.47 C
ATOM 19 O6 G B 254 89.494 114.888 -1.248 1.00 48.62 O
ATOM 20 N1 G B 254 88.572 115.183 -3.305 1.00 47.50 N
ATOM 21 C2 G B 254 87.794 115.854 -4.214 1.00 47.55 C
ATOM 22 N2 G B 254 87.711 115.310 -5.435 1.00 47.64 N
ATOM 23 N3 G B 254 87.142 116.974 -3.945 1.00 47.96 N
ATOM 24 C4 G B 254 87.336 117.377 -2.671 1.00 46.90 C
ATOM 25 P G B 255 81.609 117.615 -1.731 1.00 48.35 P
ATOM 26 OP1 G B 255 80.163 117.819 -1.980 1.00 48.56 O
ATOM 27 OP2 G B 255 82.062 117.082 -0.422 1.00 49.35 O
ATOM 28 O5' G B 255 82.172 116.661 -2.876 1.00 49.87 O
TER

Atoms:
OP1: (83.589,124.454,-8.415)
OP2: (86.035,125.168,-8.705)
C3': (84.339,124.241,-4.101)
C1': (86.377,123.512,-3.161)
C5': (84.551,122.722,-6.146)
O6: (90.724,127.622,-3.273)
O4': (86.083,122.694,-4.282)
C8: (88.006,124.654,-4.749)
C2: (88.666,126.229,-0.735)
C6: (89.859,126.899,-2.768)
C5: (89.026,125.946,-3.401)
C4: (88.115,125.255,-2.637)
P: (85.039,124.141,-8.316)
C4': (84.690,122.870,-4.654)
C2': (85.097,124.259,-2.781)
O2': (84.444,123.561,-1.745)
N1: (89.604,126.972,-1.403)
N2: (88.565,126.435,0.583)
N3: (87.883,125.346,-1.313)
N7: (88.950,125.557,-4.732)
N9: (87.456,124.428,-3.510)
O5': (85.348,123.713,-6.813)
O3': (82.934,124.392,-3.931)
OP1: (83.512,121.231,2.860)
OP2: (85.416,119.508,3.117)
C3': (83.755,119.122,-1.780)
C1': (85.887,119.456,-2.712)
C5': (83.992,121.056,-0.087)
O6: (89.494,114.888,-1.248)
O4': (85.627,120.505,-1.791)
C8: (87.258,118.520,-0.793)
C2: (87.794,115.854,-4.214)
C6: (88.780,115.575,-1.988)
C5: (88.091,116.778,-1.687)
C4: (87.336,117.377,-2.671)
P: (84.801,120.648,2.387)
C4': (84.205,120.542,-1.490)
C2': (84.537,118.819,-3.047)
O2': (83.981,119.472,-4.172)
N1: (88.572,115.183,-3.305)
N2: (87.711,115.310,-5.435)
N3: (87.142,116.974,-3.945)
N7: (88.035,117.510,-0.511)
N9: (86.793,118.498,-2.083)
O5': (84.627,120.193,0.870)
O3': (82.350,119.021,-1.987)
Image (generated by PyMOL):
PyMOL image
show in jmol