ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G6E:0237:0254

Extra

PDB:
ATOM 1 O3' A A 236 85.329 123.075 -9.160 1.00 66.70 O
ATOM 2 P G A 237 84.974 124.383 -8.289 1.00 71.08 P
ATOM 3 OP1 G A 237 83.503 124.597 -8.375 1.00 69.12 O
ATOM 4 OP2 G A 237 85.896 125.482 -8.674 1.00 70.93 O
ATOM 5 O5' G A 237 85.327 123.961 -6.794 1.00 72.13 O
ATOM 6 C5' G A 237 84.594 122.922 -6.125 1.00 70.17 C
ATOM 7 C4' G A 237 84.726 123.078 -4.635 1.00 69.46 C
ATOM 8 O4' G A 237 86.118 122.927 -4.252 1.00 70.61 O
ATOM 9 C3' G A 237 84.339 124.438 -4.078 1.00 67.88 C
ATOM 10 O3' G A 237 82.926 124.535 -3.918 1.00 67.06 O
ATOM 11 C2' G A 237 85.082 124.458 -2.750 1.00 68.96 C
ATOM 12 O2' G A 237 84.431 123.714 -1.744 1.00 68.53 O
ATOM 13 C1' G A 237 86.382 123.738 -3.119 1.00 71.12 C
ATOM 14 N9 G A 237 87.474 124.655 -3.428 1.00 73.32 N
ATOM 15 C8 G A 237 88.065 124.881 -4.649 1.00 74.76 C
ATOM 16 N7 G A 237 89.015 125.777 -4.599 1.00 75.42 N
ATOM 17 C5 G A 237 89.054 126.163 -3.266 1.00 75.05 C
ATOM 18 C6 G A 237 89.877 127.108 -2.605 1.00 75.16 C
ATOM 19 O6 G A 237 90.768 127.820 -3.079 1.00 75.80 O
ATOM 20 N1 G A 237 89.579 127.184 -1.251 1.00 74.99 N
ATOM 21 C2 G A 237 88.615 126.450 -0.613 1.00 73.93 C
ATOM 22 N2 G A 237 88.477 126.662 0.697 1.00 73.95 N
ATOM 23 N3 G A 237 87.841 125.571 -1.215 1.00 74.45 N
ATOM 24 C4 G A 237 88.112 125.478 -2.531 1.00 74.55 C
ATOM 25 P C A 238 82.238 125.966 -3.640 1.00 67.13 P
ATOM 26 OP1 C A 238 80.769 125.738 -3.565 1.00 65.50 O
ATOM 27 OP2 C A 238 82.775 126.965 -4.605 1.00 66.19 O
ATOM 28 O5' C A 238 82.743 126.352 -2.176 1.00 66.79 O
TER

ATOM 1 O3' U B 253 85.868 122.004 2.397 1.00 56.16 O
ATOM 2 P G B 254 84.813 120.802 2.402 1.00 58.76 P
ATOM 3 OP1 G B 254 83.496 121.344 2.855 1.00 55.34 O
ATOM 4 OP2 G B 254 85.447 119.666 3.130 1.00 57.38 O
ATOM 5 O5' G B 254 84.694 120.381 0.870 1.00 58.90 O
ATOM 6 C5' G B 254 84.084 121.264 -0.088 1.00 60.16 C
ATOM 7 C4' G B 254 84.251 120.724 -1.490 1.00 60.34 C
ATOM 8 O4' G B 254 85.662 120.661 -1.835 1.00 58.73 O
ATOM 9 C3' G B 254 83.760 119.307 -1.733 1.00 60.56 C
ATOM 10 O3' G B 254 82.350 119.241 -1.920 1.00 62.31 O
ATOM 11 C2' G B 254 84.518 118.937 -2.997 1.00 59.39 C
ATOM 12 O2' G B 254 83.945 119.531 -4.145 1.00 59.17 O
ATOM 13 C1' G B 254 85.882 119.571 -2.715 1.00 58.61 C
ATOM 14 N9 G B 254 86.796 118.631 -2.072 1.00 57.53 N
ATOM 15 C8 G B 254 87.276 118.681 -0.788 1.00 57.44 C
ATOM 16 N7 G B 254 88.073 117.688 -0.502 1.00 57.39 N
ATOM 17 C5 G B 254 88.123 116.938 -1.668 1.00 56.87 C
ATOM 18 C6 G B 254 88.833 115.745 -1.965 1.00 57.25 C
ATOM 19 O6 G B 254 89.579 115.087 -1.230 1.00 57.98 O
ATOM 20 N1 G B 254 88.607 115.328 -3.271 1.00 57.33 N
ATOM 21 C2 G B 254 87.796 115.969 -4.177 1.00 57.88 C
ATOM 22 N2 G B 254 87.694 115.404 -5.391 1.00 57.11 N
ATOM 23 N3 G B 254 87.129 117.081 -3.911 1.00 57.97 N
ATOM 24 C4 G B 254 87.340 117.506 -2.647 1.00 57.58 C
ATOM 25 P G B 255 81.578 117.854 -1.654 1.00 62.52 P
ATOM 26 OP1 G B 255 80.136 118.089 -1.921 1.00 62.26 O
ATOM 27 OP2 G B 255 82.007 117.330 -0.330 1.00 61.75 O
ATOM 28 O5' G B 255 82.132 116.879 -2.788 1.00 62.47 O
TER

Atoms:
OP1: (83.503,124.597,-8.375)
OP2: (85.896,125.482,-8.674)
C3': (84.339,124.438,-4.078)
C1': (86.382,123.738,-3.119)
C5': (84.594,122.922,-6.125)
O6: (90.768,127.820,-3.079)
O4': (86.118,122.927,-4.252)
C8: (88.065,124.881,-4.649)
C2: (88.615,126.450,-0.613)
C6: (89.877,127.108,-2.605)
C5: (89.054,126.163,-3.266)
C4: (88.112,125.478,-2.531)
P: (84.974,124.383,-8.289)
C4': (84.726,123.078,-4.635)
C2': (85.082,124.458,-2.750)
O2': (84.431,123.714,-1.744)
N1: (89.579,127.184,-1.251)
N2: (88.477,126.662,0.697)
N3: (87.841,125.571,-1.215)
N7: (89.015,125.777,-4.599)
N9: (87.474,124.655,-3.428)
O5': (85.327,123.961,-6.794)
O3': (82.926,124.535,-3.918)
OP1: (83.496,121.344,2.855)
OP2: (85.447,119.666,3.130)
C3': (83.760,119.307,-1.733)
C1': (85.882,119.571,-2.715)
C5': (84.084,121.264,-0.088)
O6: (89.579,115.087,-1.230)
O4': (85.662,120.661,-1.835)
C8: (87.276,118.681,-0.788)
C2: (87.796,115.969,-4.177)
C6: (88.833,115.745,-1.965)
C5: (88.123,116.938,-1.668)
C4: (87.340,117.506,-2.647)
P: (84.813,120.802,2.402)
C4': (84.251,120.724,-1.490)
C2': (84.518,118.937,-2.997)
O2': (83.945,119.531,-4.145)
N1: (88.607,115.328,-3.271)
N2: (87.694,115.404,-5.391)
N3: (87.129,117.081,-3.911)
N7: (88.073,117.688,-0.502)
N9: (86.796,118.631,-2.072)
O5': (84.694,120.381,0.870)
O3': (82.350,119.241,-1.920)
Image (generated by PyMOL):
PyMOL image
show in jmol