Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E13:E19
Extra
PDB:
ATOM 1 O3' U A 12 -18.621 45.918 3.014 1.00 38.06 O
ATOM 2 P A A 13 -19.155 45.276 4.380 1.00 41.40 P
ATOM 3 OP1 A A 13 -19.622 46.391 5.243 1.00 41.42 O
ATOM 4 OP2 A A 13 -18.118 44.338 4.885 1.00 40.31 O
ATOM 5 O5' A A 13 -20.419 44.432 3.906 1.00 40.99 O
ATOM 6 C5' A A 13 -20.965 43.403 4.719 1.00 40.42 C
ATOM 7 C4' A A 13 -22.088 42.712 3.985 1.00 39.78 C
ATOM 8 O4' A A 13 -21.577 42.128 2.758 1.00 37.36 O
ATOM 9 C3' A A 13 -22.712 41.540 4.718 1.00 39.79 C
ATOM 10 O3' A A 13 -23.703 41.996 5.630 1.00 41.32 O
ATOM 11 C2' A A 13 -23.320 40.732 3.579 1.00 37.60 C
ATOM 12 O2' A A 13 -24.570 41.235 3.151 1.00 37.35 O
ATOM 13 C1' A A 13 -22.277 40.927 2.477 1.00 34.96 C
ATOM 14 N9 A A 13 -21.305 39.837 2.386 1.00 30.31 N
ATOM 15 C8 A A 13 -19.935 39.927 2.383 1.00 28.89 C
ATOM 16 N7 A A 13 -19.330 38.769 2.279 1.00 28.76 N
ATOM 17 C5 A A 13 -20.372 37.853 2.212 1.00 29.16 C
ATOM 18 C6 A A 13 -20.395 36.450 2.092 1.00 27.74 C
ATOM 19 N6 A A 13 -19.298 35.693 2.021 1.00 24.58 N
ATOM 20 N1 A A 13 -21.602 35.844 2.048 1.00 25.77 N
ATOM 21 C2 A A 13 -22.702 36.602 2.123 1.00 26.17 C
ATOM 22 N3 A A 13 -22.809 37.924 2.239 1.00 28.94 N
ATOM 23 C4 A A 13 -21.593 38.498 2.277 1.00 29.53 C
ATOM 24 P A A 14 -23.844 41.289 7.061 1.00 43.33 P
ATOM 25 OP1 A A 14 -25.064 41.811 7.725 1.00 43.70 O
ATOM 26 OP2 A A 14 -22.529 41.400 7.744 1.00 42.37 O
ATOM 27 O5' A A 14 -24.082 39.759 6.695 1.00 44.84 O
TER
ATOM 1 O3' U B 18 -25.113 27.189 3.245 1.00 51.08 O
ATOM 2 P A B 19 -23.713 26.515 2.844 1.00 47.75 P
ATOM 3 OP1 A B 19 -23.838 25.955 1.475 1.00 49.42 O
ATOM 4 OP2 A B 19 -23.298 25.634 3.965 1.00 46.39 O
ATOM 5 O5' A B 19 -22.708 27.749 2.790 1.00 42.87 O
ATOM 6 C5' A B 19 -22.480 28.451 1.575 1.00 34.70 C
ATOM 7 C4' A B 19 -22.408 29.934 1.838 1.00 30.03 C
ATOM 8 O4' A B 19 -21.489 30.188 2.933 1.00 27.47 O
ATOM 9 C3' A B 19 -21.870 30.758 0.681 1.00 29.34 C
ATOM 10 O3' A B 19 -22.909 31.094 -0.232 1.00 32.39 O
ATOM 11 C2' A B 19 -21.315 31.985 1.395 1.00 26.67 C
ATOM 12 O2' A B 19 -22.321 32.914 1.747 1.00 25.97 O
ATOM 13 C1' A B 19 -20.732 31.355 2.661 1.00 24.56 C
ATOM 14 N9 A B 19 -19.331 30.959 2.522 1.00 21.35 N
ATOM 15 C8 A B 19 -18.814 29.689 2.592 1.00 19.01 C
ATOM 16 N7 A B 19 -17.515 29.637 2.434 1.00 18.24 N
ATOM 17 C5 A B 19 -17.149 30.962 2.245 1.00 18.21 C
ATOM 18 C6 A B 19 -15.904 31.577 2.025 1.00 17.42 C
ATOM 19 N6 A B 19 -14.750 30.910 1.957 1.00 18.37 N
ATOM 20 N1 A B 19 -15.884 32.918 1.877 1.00 17.72 N
ATOM 21 C2 A B 19 -17.041 33.587 1.949 1.00 19.24 C
ATOM 22 N3 A B 19 -18.272 33.124 2.152 1.00 20.61 N
ATOM 23 C4 A B 19 -18.258 31.788 2.296 1.00 19.48 C
ATOM 24 P G B 20 -22.754 30.720 -1.788 1.00 34.55 P
ATOM 25 OP1 G B 20 -23.426 29.417 -2.021 1.00 31.72 O
ATOM 26 OP2 G B 20 -21.323 30.882 -2.151 1.00 37.02 O
ATOM 27 O5' G B 20 -23.591 31.849 -2.536 1.00 33.36 O
TER
ATOM 2 P A A 13 -19.155 45.276 4.380 1.00 41.40 P
ATOM 3 OP1 A A 13 -19.622 46.391 5.243 1.00 41.42 O
ATOM 4 OP2 A A 13 -18.118 44.338 4.885 1.00 40.31 O
ATOM 5 O5' A A 13 -20.419 44.432 3.906 1.00 40.99 O
ATOM 6 C5' A A 13 -20.965 43.403 4.719 1.00 40.42 C
ATOM 7 C4' A A 13 -22.088 42.712 3.985 1.00 39.78 C
ATOM 8 O4' A A 13 -21.577 42.128 2.758 1.00 37.36 O
ATOM 9 C3' A A 13 -22.712 41.540 4.718 1.00 39.79 C
ATOM 10 O3' A A 13 -23.703 41.996 5.630 1.00 41.32 O
ATOM 11 C2' A A 13 -23.320 40.732 3.579 1.00 37.60 C
ATOM 12 O2' A A 13 -24.570 41.235 3.151 1.00 37.35 O
ATOM 13 C1' A A 13 -22.277 40.927 2.477 1.00 34.96 C
ATOM 14 N9 A A 13 -21.305 39.837 2.386 1.00 30.31 N
ATOM 15 C8 A A 13 -19.935 39.927 2.383 1.00 28.89 C
ATOM 16 N7 A A 13 -19.330 38.769 2.279 1.00 28.76 N
ATOM 17 C5 A A 13 -20.372 37.853 2.212 1.00 29.16 C
ATOM 18 C6 A A 13 -20.395 36.450 2.092 1.00 27.74 C
ATOM 19 N6 A A 13 -19.298 35.693 2.021 1.00 24.58 N
ATOM 20 N1 A A 13 -21.602 35.844 2.048 1.00 25.77 N
ATOM 21 C2 A A 13 -22.702 36.602 2.123 1.00 26.17 C
ATOM 22 N3 A A 13 -22.809 37.924 2.239 1.00 28.94 N
ATOM 23 C4 A A 13 -21.593 38.498 2.277 1.00 29.53 C
ATOM 24 P A A 14 -23.844 41.289 7.061 1.00 43.33 P
ATOM 25 OP1 A A 14 -25.064 41.811 7.725 1.00 43.70 O
ATOM 26 OP2 A A 14 -22.529 41.400 7.744 1.00 42.37 O
ATOM 27 O5' A A 14 -24.082 39.759 6.695 1.00 44.84 O
TER
ATOM 1 O3' U B 18 -25.113 27.189 3.245 1.00 51.08 O
ATOM 2 P A B 19 -23.713 26.515 2.844 1.00 47.75 P
ATOM 3 OP1 A B 19 -23.838 25.955 1.475 1.00 49.42 O
ATOM 4 OP2 A B 19 -23.298 25.634 3.965 1.00 46.39 O
ATOM 5 O5' A B 19 -22.708 27.749 2.790 1.00 42.87 O
ATOM 6 C5' A B 19 -22.480 28.451 1.575 1.00 34.70 C
ATOM 7 C4' A B 19 -22.408 29.934 1.838 1.00 30.03 C
ATOM 8 O4' A B 19 -21.489 30.188 2.933 1.00 27.47 O
ATOM 9 C3' A B 19 -21.870 30.758 0.681 1.00 29.34 C
ATOM 10 O3' A B 19 -22.909 31.094 -0.232 1.00 32.39 O
ATOM 11 C2' A B 19 -21.315 31.985 1.395 1.00 26.67 C
ATOM 12 O2' A B 19 -22.321 32.914 1.747 1.00 25.97 O
ATOM 13 C1' A B 19 -20.732 31.355 2.661 1.00 24.56 C
ATOM 14 N9 A B 19 -19.331 30.959 2.522 1.00 21.35 N
ATOM 15 C8 A B 19 -18.814 29.689 2.592 1.00 19.01 C
ATOM 16 N7 A B 19 -17.515 29.637 2.434 1.00 18.24 N
ATOM 17 C5 A B 19 -17.149 30.962 2.245 1.00 18.21 C
ATOM 18 C6 A B 19 -15.904 31.577 2.025 1.00 17.42 C
ATOM 19 N6 A B 19 -14.750 30.910 1.957 1.00 18.37 N
ATOM 20 N1 A B 19 -15.884 32.918 1.877 1.00 17.72 N
ATOM 21 C2 A B 19 -17.041 33.587 1.949 1.00 19.24 C
ATOM 22 N3 A B 19 -18.272 33.124 2.152 1.00 20.61 N
ATOM 23 C4 A B 19 -18.258 31.788 2.296 1.00 19.48 C
ATOM 24 P G B 20 -22.754 30.720 -1.788 1.00 34.55 P
ATOM 25 OP1 G B 20 -23.426 29.417 -2.021 1.00 31.72 O
ATOM 26 OP2 G B 20 -21.323 30.882 -2.151 1.00 37.02 O
ATOM 27 O5' G B 20 -23.591 31.849 -2.536 1.00 33.36 O
TER
Atoms:
OP1: (-19.622,46.391,5.243)
OP2: (-18.118,44.338,4.885)
C3': (-22.712,41.540,4.718)
C1': (-22.277,40.927,2.477)
C5': (-20.965,43.403,4.719)
O4': (-21.577,42.128,2.758)
C8: (-19.935,39.927,2.383)
O2': (-24.570,41.235,3.151)
C6: (-20.395,36.450,2.092)
C5: (-20.372,37.853,2.212)
C4: (-21.593,38.498,2.277)
P: (-19.155,45.276,4.380)
C4': (-22.088,42.712,3.985)
C2': (-23.320,40.732,3.579)
C2: (-22.702,36.602,2.123)
N1: (-21.602,35.844,2.048)
N3: (-22.809,37.924,2.239)
N6: (-19.298,35.693,2.021)
N7: (-19.330,38.769,2.279)
N9: (-21.305,39.837,2.386)
O5': (-20.419,44.432,3.906)
O3': (-23.703,41.996,5.630)
OP2: (-18.118,44.338,4.885)
C3': (-22.712,41.540,4.718)
C1': (-22.277,40.927,2.477)
C5': (-20.965,43.403,4.719)
O4': (-21.577,42.128,2.758)
C8: (-19.935,39.927,2.383)
O2': (-24.570,41.235,3.151)
C6: (-20.395,36.450,2.092)
C5: (-20.372,37.853,2.212)
C4: (-21.593,38.498,2.277)
P: (-19.155,45.276,4.380)
C4': (-22.088,42.712,3.985)
C2': (-23.320,40.732,3.579)
C2: (-22.702,36.602,2.123)
N1: (-21.602,35.844,2.048)
N3: (-22.809,37.924,2.239)
N6: (-19.298,35.693,2.021)
N7: (-19.330,38.769,2.279)
N9: (-21.305,39.837,2.386)
O5': (-20.419,44.432,3.906)
O3': (-23.703,41.996,5.630)
OP1: (-23.838,25.955,1.475)
OP2: (-23.298,25.634,3.965)
C3': (-21.870,30.758,0.681)
C1': (-20.732,31.355,2.661)
C5': (-22.480,28.451,1.575)
O4': (-21.489,30.188,2.933)
C8: (-18.814,29.689,2.592)
O2': (-22.321,32.914,1.747)
C6: (-15.904,31.577,2.025)
C5: (-17.149,30.962,2.245)
C4: (-18.258,31.788,2.296)
P: (-23.713,26.515,2.844)
C4': (-22.408,29.934,1.838)
C2': (-21.315,31.985,1.395)
C2: (-17.041,33.587,1.949)
N1: (-15.884,32.918,1.877)
N3: (-18.272,33.124,2.152)
N6: (-14.750,30.910,1.957)
N7: (-17.515,29.637,2.434)
N9: (-19.331,30.959,2.522)
O5': (-22.708,27.749,2.790)
O3': (-22.909,31.094,-0.232)
OP2: (-23.298,25.634,3.965)
C3': (-21.870,30.758,0.681)
C1': (-20.732,31.355,2.661)
C5': (-22.480,28.451,1.575)
O4': (-21.489,30.188,2.933)
C8: (-18.814,29.689,2.592)
O2': (-22.321,32.914,1.747)
C6: (-15.904,31.577,2.025)
C5: (-17.149,30.962,2.245)
C4: (-18.258,31.788,2.296)
P: (-23.713,26.515,2.844)
C4': (-22.408,29.934,1.838)
C2': (-21.315,31.985,1.395)
C2: (-17.041,33.587,1.949)
N1: (-15.884,32.918,1.877)
N3: (-18.272,33.124,2.152)
N6: (-14.750,30.910,1.957)
N7: (-17.515,29.637,2.434)
N9: (-19.331,30.959,2.522)
O5': (-22.708,27.749,2.790)
O3': (-22.909,31.094,-0.232)
Image (generated by PyMOL):