Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:G13:G19
Extra
PDB:
ATOM 1 O3' U A 12 22.538 35.461 -7.456 1.00 48.03 O
ATOM 2 P A A 13 22.960 34.097 -6.728 1.00 51.28 P
ATOM 3 OP1 A A 13 23.389 33.142 -7.782 1.00 51.97 O
ATOM 4 OP2 A A 13 21.874 33.715 -5.789 1.00 50.62 O
ATOM 5 O5' A A 13 24.238 34.515 -5.877 1.00 53.31 O
ATOM 6 C5' A A 13 24.788 33.637 -4.905 1.00 56.61 C
ATOM 7 C4' A A 13 25.995 34.271 -4.260 1.00 58.37 C
ATOM 8 O4' A A 13 25.625 35.560 -3.704 1.00 58.15 O
ATOM 9 C3' A A 13 26.563 33.497 -3.084 1.00 59.40 C
ATOM 10 O3' A A 13 27.463 32.491 -3.528 1.00 62.56 O
ATOM 11 C2' A A 13 27.260 34.590 -2.287 1.00 58.14 C
ATOM 12 O2' A A 13 28.522 34.935 -2.820 1.00 55.95 O
ATOM 13 C1' A A 13 26.283 35.754 -2.463 1.00 57.84 C
ATOM 14 N9 A A 13 25.261 35.806 -1.418 1.00 57.93 N
ATOM 15 C8 A A 13 23.908 35.621 -1.559 1.00 57.45 C
ATOM 16 N7 A A 13 23.241 35.721 -0.436 1.00 57.22 N
ATOM 17 C5 A A 13 24.219 35.992 0.510 1.00 57.30 C
ATOM 18 C6 A A 13 24.160 36.209 1.898 1.00 56.72 C
ATOM 19 N6 A A 13 23.027 36.187 2.604 1.00 56.86 N
ATOM 20 N1 A A 13 25.320 36.454 2.545 1.00 56.26 N
ATOM 21 C2 A A 13 26.456 36.478 1.836 1.00 56.40 C
ATOM 22 N3 A A 13 26.640 36.292 0.532 1.00 57.20 N
ATOM 23 C4 A A 13 25.469 36.050 -0.082 1.00 57.50 C
ATOM 24 P A A 14 27.467 31.059 -2.803 1.00 65.37 P
ATOM 25 OP1 A A 14 28.631 30.280 -3.296 1.00 66.10 O
ATOM 26 OP2 A A 14 26.099 30.494 -2.928 1.00 64.76 O
ATOM 27 O5' A A 14 27.715 31.418 -1.272 1.00 68.46 O
TER
ATOM 1 O3' U B 18 28.621 35.676 11.565 1.00 84.10 O
ATOM 2 P A B 19 27.064 35.737 11.955 1.00 78.95 P
ATOM 3 OP1 A B 19 26.822 36.985 12.722 1.00 79.62 O
ATOM 4 OP2 A B 19 26.699 34.426 12.552 1.00 77.51 O
ATOM 5 O5' A B 19 26.325 35.865 10.551 1.00 72.81 O
ATOM 6 C5' A B 19 26.187 37.129 9.912 1.00 62.62 C
ATOM 7 C4' A B 19 26.026 36.944 8.423 1.00 57.39 C
ATOM 8 O4' A B 19 24.946 36.008 8.170 1.00 53.52 O
ATOM 9 C3' A B 19 25.629 38.194 7.655 1.00 55.05 C
ATOM 10 O3' A B 19 26.765 38.986 7.326 1.00 54.49 O
ATOM 11 C2' A B 19 24.966 37.607 6.416 1.00 52.34 C
ATOM 12 O2' A B 19 25.901 37.162 5.454 1.00 49.55 O
ATOM 13 C1' A B 19 24.230 36.406 7.012 1.00 50.42 C
ATOM 14 N9 A B 19 22.858 36.714 7.412 1.00 46.65 N
ATOM 15 C8 A B 19 22.398 37.028 8.667 1.00 44.89 C
ATOM 16 N7 A B 19 21.108 37.257 8.715 1.00 42.66 N
ATOM 17 C5 A B 19 20.690 37.082 7.405 1.00 42.16 C
ATOM 18 C6 A B 19 19.430 37.178 6.796 1.00 41.50 C
ATOM 19 N6 A B 19 18.311 37.485 7.455 1.00 41.88 N
ATOM 20 N1 A B 19 19.354 36.943 5.468 1.00 41.44 N
ATOM 21 C2 A B 19 20.476 36.629 4.809 1.00 41.99 C
ATOM 22 N3 A B 19 21.717 36.506 5.270 1.00 42.98 N
ATOM 23 C4 A B 19 21.757 36.748 6.591 1.00 43.54 C
ATOM 24 P G B 20 26.682 40.585 7.465 1.00 53.86 P
ATOM 25 OP1 G B 20 27.561 40.998 8.588 1.00 53.21 O
ATOM 26 OP2 G B 20 25.244 40.958 7.482 1.00 54.59 O
ATOM 27 O5' G B 20 27.321 41.123 6.108 1.00 54.10 O
TER
ATOM 2 P A A 13 22.960 34.097 -6.728 1.00 51.28 P
ATOM 3 OP1 A A 13 23.389 33.142 -7.782 1.00 51.97 O
ATOM 4 OP2 A A 13 21.874 33.715 -5.789 1.00 50.62 O
ATOM 5 O5' A A 13 24.238 34.515 -5.877 1.00 53.31 O
ATOM 6 C5' A A 13 24.788 33.637 -4.905 1.00 56.61 C
ATOM 7 C4' A A 13 25.995 34.271 -4.260 1.00 58.37 C
ATOM 8 O4' A A 13 25.625 35.560 -3.704 1.00 58.15 O
ATOM 9 C3' A A 13 26.563 33.497 -3.084 1.00 59.40 C
ATOM 10 O3' A A 13 27.463 32.491 -3.528 1.00 62.56 O
ATOM 11 C2' A A 13 27.260 34.590 -2.287 1.00 58.14 C
ATOM 12 O2' A A 13 28.522 34.935 -2.820 1.00 55.95 O
ATOM 13 C1' A A 13 26.283 35.754 -2.463 1.00 57.84 C
ATOM 14 N9 A A 13 25.261 35.806 -1.418 1.00 57.93 N
ATOM 15 C8 A A 13 23.908 35.621 -1.559 1.00 57.45 C
ATOM 16 N7 A A 13 23.241 35.721 -0.436 1.00 57.22 N
ATOM 17 C5 A A 13 24.219 35.992 0.510 1.00 57.30 C
ATOM 18 C6 A A 13 24.160 36.209 1.898 1.00 56.72 C
ATOM 19 N6 A A 13 23.027 36.187 2.604 1.00 56.86 N
ATOM 20 N1 A A 13 25.320 36.454 2.545 1.00 56.26 N
ATOM 21 C2 A A 13 26.456 36.478 1.836 1.00 56.40 C
ATOM 22 N3 A A 13 26.640 36.292 0.532 1.00 57.20 N
ATOM 23 C4 A A 13 25.469 36.050 -0.082 1.00 57.50 C
ATOM 24 P A A 14 27.467 31.059 -2.803 1.00 65.37 P
ATOM 25 OP1 A A 14 28.631 30.280 -3.296 1.00 66.10 O
ATOM 26 OP2 A A 14 26.099 30.494 -2.928 1.00 64.76 O
ATOM 27 O5' A A 14 27.715 31.418 -1.272 1.00 68.46 O
TER
ATOM 1 O3' U B 18 28.621 35.676 11.565 1.00 84.10 O
ATOM 2 P A B 19 27.064 35.737 11.955 1.00 78.95 P
ATOM 3 OP1 A B 19 26.822 36.985 12.722 1.00 79.62 O
ATOM 4 OP2 A B 19 26.699 34.426 12.552 1.00 77.51 O
ATOM 5 O5' A B 19 26.325 35.865 10.551 1.00 72.81 O
ATOM 6 C5' A B 19 26.187 37.129 9.912 1.00 62.62 C
ATOM 7 C4' A B 19 26.026 36.944 8.423 1.00 57.39 C
ATOM 8 O4' A B 19 24.946 36.008 8.170 1.00 53.52 O
ATOM 9 C3' A B 19 25.629 38.194 7.655 1.00 55.05 C
ATOM 10 O3' A B 19 26.765 38.986 7.326 1.00 54.49 O
ATOM 11 C2' A B 19 24.966 37.607 6.416 1.00 52.34 C
ATOM 12 O2' A B 19 25.901 37.162 5.454 1.00 49.55 O
ATOM 13 C1' A B 19 24.230 36.406 7.012 1.00 50.42 C
ATOM 14 N9 A B 19 22.858 36.714 7.412 1.00 46.65 N
ATOM 15 C8 A B 19 22.398 37.028 8.667 1.00 44.89 C
ATOM 16 N7 A B 19 21.108 37.257 8.715 1.00 42.66 N
ATOM 17 C5 A B 19 20.690 37.082 7.405 1.00 42.16 C
ATOM 18 C6 A B 19 19.430 37.178 6.796 1.00 41.50 C
ATOM 19 N6 A B 19 18.311 37.485 7.455 1.00 41.88 N
ATOM 20 N1 A B 19 19.354 36.943 5.468 1.00 41.44 N
ATOM 21 C2 A B 19 20.476 36.629 4.809 1.00 41.99 C
ATOM 22 N3 A B 19 21.717 36.506 5.270 1.00 42.98 N
ATOM 23 C4 A B 19 21.757 36.748 6.591 1.00 43.54 C
ATOM 24 P G B 20 26.682 40.585 7.465 1.00 53.86 P
ATOM 25 OP1 G B 20 27.561 40.998 8.588 1.00 53.21 O
ATOM 26 OP2 G B 20 25.244 40.958 7.482 1.00 54.59 O
ATOM 27 O5' G B 20 27.321 41.123 6.108 1.00 54.10 O
TER
Atoms:
OP1: (23.389,33.142,-7.782)
OP2: (21.874,33.715,-5.789)
C3': (26.563,33.497,-3.084)
C1': (26.283,35.754,-2.463)
C5': (24.788,33.637,-4.905)
O4': (25.625,35.560,-3.704)
C8: (23.908,35.621,-1.559)
O2': (28.522,34.935,-2.820)
C6: (24.160,36.209,1.898)
C5: (24.219,35.992,0.510)
C4: (25.469,36.050,-0.082)
P: (22.960,34.097,-6.728)
C4': (25.995,34.271,-4.260)
C2': (27.260,34.590,-2.287)
C2: (26.456,36.478,1.836)
N1: (25.320,36.454,2.545)
N3: (26.640,36.292,0.532)
N6: (23.027,36.187,2.604)
N7: (23.241,35.721,-0.436)
N9: (25.261,35.806,-1.418)
O5': (24.238,34.515,-5.877)
O3': (27.463,32.491,-3.528)
OP2: (21.874,33.715,-5.789)
C3': (26.563,33.497,-3.084)
C1': (26.283,35.754,-2.463)
C5': (24.788,33.637,-4.905)
O4': (25.625,35.560,-3.704)
C8: (23.908,35.621,-1.559)
O2': (28.522,34.935,-2.820)
C6: (24.160,36.209,1.898)
C5: (24.219,35.992,0.510)
C4: (25.469,36.050,-0.082)
P: (22.960,34.097,-6.728)
C4': (25.995,34.271,-4.260)
C2': (27.260,34.590,-2.287)
C2: (26.456,36.478,1.836)
N1: (25.320,36.454,2.545)
N3: (26.640,36.292,0.532)
N6: (23.027,36.187,2.604)
N7: (23.241,35.721,-0.436)
N9: (25.261,35.806,-1.418)
O5': (24.238,34.515,-5.877)
O3': (27.463,32.491,-3.528)
OP1: (26.822,36.985,12.722)
OP2: (26.699,34.426,12.552)
C3': (25.629,38.194,7.655)
C1': (24.230,36.406,7.012)
C5': (26.187,37.129,9.912)
O4': (24.946,36.008,8.170)
C8: (22.398,37.028,8.667)
O2': (25.901,37.162,5.454)
C6: (19.430,37.178,6.796)
C5: (20.690,37.082,7.405)
C4: (21.757,36.748,6.591)
P: (27.064,35.737,11.955)
C4': (26.026,36.944,8.423)
C2': (24.966,37.607,6.416)
C2: (20.476,36.629,4.809)
N1: (19.354,36.943,5.468)
N3: (21.717,36.506,5.270)
N6: (18.311,37.485,7.455)
N7: (21.108,37.257,8.715)
N9: (22.858,36.714,7.412)
O5': (26.325,35.865,10.551)
O3': (26.765,38.986,7.326)
OP2: (26.699,34.426,12.552)
C3': (25.629,38.194,7.655)
C1': (24.230,36.406,7.012)
C5': (26.187,37.129,9.912)
O4': (24.946,36.008,8.170)
C8: (22.398,37.028,8.667)
O2': (25.901,37.162,5.454)
C6: (19.430,37.178,6.796)
C5: (20.690,37.082,7.405)
C4: (21.757,36.748,6.591)
P: (27.064,35.737,11.955)
C4': (26.026,36.944,8.423)
C2': (24.966,37.607,6.416)
C2: (20.476,36.629,4.809)
N1: (19.354,36.943,5.468)
N3: (21.717,36.506,5.270)
N6: (18.311,37.485,7.455)
N7: (21.108,37.257,8.715)
N9: (22.858,36.714,7.412)
O5': (26.325,35.865,10.551)
O3': (26.765,38.986,7.326)
Image (generated by PyMOL):