Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:H13:H19
Extra
PDB:
ATOM 1 O3' U A 12 -14.683 46.856 70.824 1.00 47.72 O
ATOM 2 P A A 13 -15.315 48.113 71.596 1.00 50.45 P
ATOM 3 OP1 A A 13 -15.874 49.029 70.570 1.00 50.94 O
ATOM 4 OP2 A A 13 -14.309 48.621 72.564 1.00 49.82 O
ATOM 5 O5' A A 13 -16.530 47.487 72.413 1.00 51.42 O
ATOM 6 C5' A A 13 -17.241 48.265 73.369 1.00 53.18 C
ATOM 7 C4' A A 13 -18.358 47.452 73.975 1.00 53.05 C
ATOM 8 O4' A A 13 -17.821 46.202 74.479 1.00 51.71 O
ATOM 9 C3' A A 13 -19.040 48.095 75.172 1.00 53.65 C
ATOM 10 O3' A A 13 -20.087 48.958 74.742 1.00 55.92 O
ATOM 11 C2' A A 13 -19.577 46.887 75.928 1.00 52.53 C
ATOM 12 O2' A A 13 -20.789 46.405 75.383 1.00 53.86 O
ATOM 13 C1' A A 13 -18.462 45.863 75.696 1.00 50.98 C
ATOM 14 N9 A A 13 -17.443 45.836 76.745 1.00 48.03 N
ATOM 15 C8 A A 13 -16.087 45.993 76.593 1.00 47.15 C
ATOM 16 N7 A A 13 -15.415 45.907 77.715 1.00 46.07 N
ATOM 17 C5 A A 13 -16.394 45.682 78.672 1.00 45.04 C
ATOM 18 C6 A A 13 -16.331 45.498 80.064 1.00 42.61 C
ATOM 19 N6 A A 13 -15.193 45.510 80.762 1.00 40.48 N
ATOM 20 N1 A A 13 -17.491 45.297 80.724 1.00 42.64 N
ATOM 21 C2 A A 13 -18.632 45.281 80.024 1.00 44.24 C
ATOM 22 N3 A A 13 -18.821 45.440 78.715 1.00 45.76 N
ATOM 23 C4 A A 13 -17.648 45.638 78.089 1.00 46.44 C
ATOM 24 P A A 14 -20.115 50.484 75.242 1.00 58.67 P
ATOM 25 OP1 A A 14 -21.303 51.147 74.649 1.00 58.69 O
ATOM 26 OP2 A A 14 -18.763 51.054 75.009 1.00 58.01 O
ATOM 27 O5' A A 14 -20.339 50.373 76.814 1.00 59.18 O
TER
ATOM 1 O3' U B 18 -20.310 45.402 89.952 1.00 78.48 O
ATOM 2 P A B 19 -18.711 45.259 89.920 1.00 76.08 P
ATOM 3 OP1 A B 19 -18.348 43.914 90.433 1.00 76.67 O
ATOM 4 OP2 A B 19 -18.147 46.470 90.569 1.00 76.52 O
ATOM 5 O5' A B 19 -18.359 45.318 88.368 1.00 71.97 O
ATOM 6 C5' A B 19 -18.058 44.131 87.643 1.00 66.64 C
ATOM 7 C4' A B 19 -17.807 44.459 86.192 1.00 63.43 C
ATOM 8 O4' A B 19 -16.836 45.534 86.105 1.00 62.79 O
ATOM 9 C3' A B 19 -17.206 43.330 85.371 1.00 61.19 C
ATOM 10 O3' A B 19 -18.227 42.476 84.868 1.00 57.79 O
ATOM 11 C2' A B 19 -16.499 44.086 84.253 1.00 60.07 C
ATOM 12 O2' A B 19 -17.381 44.499 83.230 1.00 58.26 O
ATOM 13 C1' A B 19 -15.972 45.310 85.004 1.00 60.03 C
ATOM 14 N9 A B 19 -14.619 45.131 85.527 1.00 58.35 N
ATOM 15 C8 A B 19 -14.249 44.918 86.832 1.00 57.28 C
ATOM 16 N7 A B 19 -12.955 44.798 87.002 1.00 56.25 N
ATOM 17 C5 A B 19 -12.438 44.941 85.723 1.00 55.46 C
ATOM 18 C6 A B 19 -11.126 44.917 85.229 1.00 54.89 C
ATOM 19 N6 A B 19 -10.051 44.732 85.998 1.00 54.31 N
ATOM 20 N1 A B 19 -10.951 45.094 83.901 1.00 55.19 N
ATOM 21 C2 A B 19 -12.031 45.281 83.133 1.00 55.25 C
ATOM 22 N3 A B 19 -13.314 45.324 83.480 1.00 55.73 N
ATOM 23 C4 A B 19 -13.451 45.145 84.804 1.00 56.30 C
ATOM 24 P G B 20 -18.099 40.886 85.056 1.00 54.64 P
ATOM 25 OP1 G B 20 -18.765 40.513 86.329 1.00 54.21 O
ATOM 26 OP2 G B 20 -16.676 40.520 84.836 1.00 53.61 O
ATOM 27 O5' G B 20 -18.962 40.296 83.855 1.00 52.46 O
TER
ATOM 2 P A A 13 -15.315 48.113 71.596 1.00 50.45 P
ATOM 3 OP1 A A 13 -15.874 49.029 70.570 1.00 50.94 O
ATOM 4 OP2 A A 13 -14.309 48.621 72.564 1.00 49.82 O
ATOM 5 O5' A A 13 -16.530 47.487 72.413 1.00 51.42 O
ATOM 6 C5' A A 13 -17.241 48.265 73.369 1.00 53.18 C
ATOM 7 C4' A A 13 -18.358 47.452 73.975 1.00 53.05 C
ATOM 8 O4' A A 13 -17.821 46.202 74.479 1.00 51.71 O
ATOM 9 C3' A A 13 -19.040 48.095 75.172 1.00 53.65 C
ATOM 10 O3' A A 13 -20.087 48.958 74.742 1.00 55.92 O
ATOM 11 C2' A A 13 -19.577 46.887 75.928 1.00 52.53 C
ATOM 12 O2' A A 13 -20.789 46.405 75.383 1.00 53.86 O
ATOM 13 C1' A A 13 -18.462 45.863 75.696 1.00 50.98 C
ATOM 14 N9 A A 13 -17.443 45.836 76.745 1.00 48.03 N
ATOM 15 C8 A A 13 -16.087 45.993 76.593 1.00 47.15 C
ATOM 16 N7 A A 13 -15.415 45.907 77.715 1.00 46.07 N
ATOM 17 C5 A A 13 -16.394 45.682 78.672 1.00 45.04 C
ATOM 18 C6 A A 13 -16.331 45.498 80.064 1.00 42.61 C
ATOM 19 N6 A A 13 -15.193 45.510 80.762 1.00 40.48 N
ATOM 20 N1 A A 13 -17.491 45.297 80.724 1.00 42.64 N
ATOM 21 C2 A A 13 -18.632 45.281 80.024 1.00 44.24 C
ATOM 22 N3 A A 13 -18.821 45.440 78.715 1.00 45.76 N
ATOM 23 C4 A A 13 -17.648 45.638 78.089 1.00 46.44 C
ATOM 24 P A A 14 -20.115 50.484 75.242 1.00 58.67 P
ATOM 25 OP1 A A 14 -21.303 51.147 74.649 1.00 58.69 O
ATOM 26 OP2 A A 14 -18.763 51.054 75.009 1.00 58.01 O
ATOM 27 O5' A A 14 -20.339 50.373 76.814 1.00 59.18 O
TER
ATOM 1 O3' U B 18 -20.310 45.402 89.952 1.00 78.48 O
ATOM 2 P A B 19 -18.711 45.259 89.920 1.00 76.08 P
ATOM 3 OP1 A B 19 -18.348 43.914 90.433 1.00 76.67 O
ATOM 4 OP2 A B 19 -18.147 46.470 90.569 1.00 76.52 O
ATOM 5 O5' A B 19 -18.359 45.318 88.368 1.00 71.97 O
ATOM 6 C5' A B 19 -18.058 44.131 87.643 1.00 66.64 C
ATOM 7 C4' A B 19 -17.807 44.459 86.192 1.00 63.43 C
ATOM 8 O4' A B 19 -16.836 45.534 86.105 1.00 62.79 O
ATOM 9 C3' A B 19 -17.206 43.330 85.371 1.00 61.19 C
ATOM 10 O3' A B 19 -18.227 42.476 84.868 1.00 57.79 O
ATOM 11 C2' A B 19 -16.499 44.086 84.253 1.00 60.07 C
ATOM 12 O2' A B 19 -17.381 44.499 83.230 1.00 58.26 O
ATOM 13 C1' A B 19 -15.972 45.310 85.004 1.00 60.03 C
ATOM 14 N9 A B 19 -14.619 45.131 85.527 1.00 58.35 N
ATOM 15 C8 A B 19 -14.249 44.918 86.832 1.00 57.28 C
ATOM 16 N7 A B 19 -12.955 44.798 87.002 1.00 56.25 N
ATOM 17 C5 A B 19 -12.438 44.941 85.723 1.00 55.46 C
ATOM 18 C6 A B 19 -11.126 44.917 85.229 1.00 54.89 C
ATOM 19 N6 A B 19 -10.051 44.732 85.998 1.00 54.31 N
ATOM 20 N1 A B 19 -10.951 45.094 83.901 1.00 55.19 N
ATOM 21 C2 A B 19 -12.031 45.281 83.133 1.00 55.25 C
ATOM 22 N3 A B 19 -13.314 45.324 83.480 1.00 55.73 N
ATOM 23 C4 A B 19 -13.451 45.145 84.804 1.00 56.30 C
ATOM 24 P G B 20 -18.099 40.886 85.056 1.00 54.64 P
ATOM 25 OP1 G B 20 -18.765 40.513 86.329 1.00 54.21 O
ATOM 26 OP2 G B 20 -16.676 40.520 84.836 1.00 53.61 O
ATOM 27 O5' G B 20 -18.962 40.296 83.855 1.00 52.46 O
TER
Atoms:
OP1: (-15.874,49.029,70.570)
OP2: (-14.309,48.621,72.564)
C3': (-19.040,48.095,75.172)
C1': (-18.462,45.863,75.696)
C5': (-17.241,48.265,73.369)
O4': (-17.821,46.202,74.479)
C8: (-16.087,45.993,76.593)
O2': (-20.789,46.405,75.383)
C6: (-16.331,45.498,80.064)
C5: (-16.394,45.682,78.672)
C4: (-17.648,45.638,78.089)
P: (-15.315,48.113,71.596)
C4': (-18.358,47.452,73.975)
C2': (-19.577,46.887,75.928)
C2: (-18.632,45.281,80.024)
N1: (-17.491,45.297,80.724)
N3: (-18.821,45.440,78.715)
N6: (-15.193,45.510,80.762)
N7: (-15.415,45.907,77.715)
N9: (-17.443,45.836,76.745)
O5': (-16.530,47.487,72.413)
O3': (-20.087,48.958,74.742)
OP2: (-14.309,48.621,72.564)
C3': (-19.040,48.095,75.172)
C1': (-18.462,45.863,75.696)
C5': (-17.241,48.265,73.369)
O4': (-17.821,46.202,74.479)
C8: (-16.087,45.993,76.593)
O2': (-20.789,46.405,75.383)
C6: (-16.331,45.498,80.064)
C5: (-16.394,45.682,78.672)
C4: (-17.648,45.638,78.089)
P: (-15.315,48.113,71.596)
C4': (-18.358,47.452,73.975)
C2': (-19.577,46.887,75.928)
C2: (-18.632,45.281,80.024)
N1: (-17.491,45.297,80.724)
N3: (-18.821,45.440,78.715)
N6: (-15.193,45.510,80.762)
N7: (-15.415,45.907,77.715)
N9: (-17.443,45.836,76.745)
O5': (-16.530,47.487,72.413)
O3': (-20.087,48.958,74.742)
OP1: (-18.348,43.914,90.433)
OP2: (-18.147,46.470,90.569)
C3': (-17.206,43.330,85.371)
C1': (-15.972,45.310,85.004)
C5': (-18.058,44.131,87.643)
O4': (-16.836,45.534,86.105)
C8: (-14.249,44.918,86.832)
O2': (-17.381,44.499,83.230)
C6: (-11.126,44.917,85.229)
C5: (-12.438,44.941,85.723)
C4: (-13.451,45.145,84.804)
P: (-18.711,45.259,89.920)
C4': (-17.807,44.459,86.192)
C2': (-16.499,44.086,84.253)
C2: (-12.031,45.281,83.133)
N1: (-10.951,45.094,83.901)
N3: (-13.314,45.324,83.480)
N6: (-10.051,44.732,85.998)
N7: (-12.955,44.798,87.002)
N9: (-14.619,45.131,85.527)
O5': (-18.359,45.318,88.368)
O3': (-18.227,42.476,84.868)
OP2: (-18.147,46.470,90.569)
C3': (-17.206,43.330,85.371)
C1': (-15.972,45.310,85.004)
C5': (-18.058,44.131,87.643)
O4': (-16.836,45.534,86.105)
C8: (-14.249,44.918,86.832)
O2': (-17.381,44.499,83.230)
C6: (-11.126,44.917,85.229)
C5: (-12.438,44.941,85.723)
C4: (-13.451,45.145,84.804)
P: (-18.711,45.259,89.920)
C4': (-17.807,44.459,86.192)
C2': (-16.499,44.086,84.253)
C2: (-12.031,45.281,83.133)
N1: (-10.951,45.094,83.901)
N3: (-13.314,45.324,83.480)
N6: (-10.051,44.732,85.998)
N7: (-12.955,44.798,87.002)
N9: (-14.619,45.131,85.527)
O5': (-18.359,45.318,88.368)
O3': (-18.227,42.476,84.868)
Image (generated by PyMOL):