ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:01394:01393

Extra

PDB:
ATOM 1 O3' A A1393 46.529 173.465 77.249 1.00 44.03 O
ATOM 2 P U A1394 46.478 173.369 75.645 1.00 41.40 P
ATOM 3 OP1 U A1394 45.039 173.512 75.295 1.00 42.66 O
ATOM 4 OP2 U A1394 47.237 172.194 75.156 1.00 40.46 O
ATOM 5 O5' U A1394 47.259 174.684 75.201 1.00 44.09 O
ATOM 6 C5' U A1394 47.103 175.257 73.892 1.00 42.84 C
ATOM 7 C4' U A1394 47.613 176.676 73.893 1.00 43.22 C
ATOM 8 O4' U A1394 46.813 177.451 74.828 1.00 44.04 O
ATOM 9 C3' U A1394 49.063 176.854 74.338 1.00 44.44 C
ATOM 10 O3' U A1394 49.636 177.948 73.648 1.00 44.09 O
ATOM 11 C2' U A1394 48.929 177.172 75.822 1.00 43.74 C
ATOM 12 O2' U A1394 50.026 177.907 76.342 1.00 42.44 O
ATOM 13 C1' U A1394 47.638 177.990 75.839 1.00 43.09 C
ATOM 14 N1 U A1394 46.896 177.923 77.105 1.00 44.41 N
ATOM 15 C2 U A1394 46.390 179.102 77.618 1.00 44.94 C
ATOM 16 O2 U A1394 46.533 180.176 77.070 1.00 45.85 O
ATOM 17 N3 U A1394 45.702 178.974 78.798 1.00 45.46 N
ATOM 18 C4 U A1394 45.462 177.808 79.496 1.00 46.05 C
ATOM 19 O4 U A1394 44.809 177.851 80.537 1.00 46.68 O
ATOM 20 C5 U A1394 46.020 176.631 78.907 1.00 45.95 C
ATOM 21 C6 U A1394 46.705 176.725 77.763 1.00 45.23 C
ATOM 22 P C A1395 50.692 177.672 72.476 1.00 48.05 P
ATOM 23 OP1 C A1395 51.111 179.006 71.961 1.00 48.60 O
ATOM 24 OP2 C A1395 50.117 176.665 71.535 1.00 46.56 O
ATOM 25 O5' C A1395 51.915 176.988 73.231 1.00 46.64 O
TER

ATOM 1 O3' G B1392 45.545 169.385 81.661 1.00 44.89 O
ATOM 2 P A B1393 45.352 169.380 80.072 1.00 46.34 P
ATOM 3 OP1 A B1393 43.925 169.726 79.840 1.00 49.10 O
ATOM 4 OP2 A B1393 45.915 168.133 79.485 1.00 45.88 O
ATOM 5 O5' A B1393 46.261 170.581 79.564 1.00 45.56 O
ATOM 6 C5' A B1393 45.997 171.937 79.956 1.00 43.54 C
ATOM 7 C4' A B1393 47.111 172.822 79.472 1.00 45.09 C
ATOM 8 O4' A B1393 48.342 172.468 80.154 1.00 45.72 O
ATOM 9 C3' A B1393 47.421 172.649 77.997 1.00 44.33 C
ATOM 10 O3' A B1393 46.529 173.465 77.249 1.00 44.03 O
ATOM 11 C2' A B1393 48.884 173.065 77.916 1.00 45.37 C
ATOM 12 O2' A B1393 49.049 174.466 77.914 1.00 48.38 O
ATOM 13 C1' A B1393 49.427 172.522 79.242 1.00 46.08 C
ATOM 14 N9 A B1393 50.011 171.183 79.169 1.00 45.47 N
ATOM 15 C8 A B1393 49.332 169.992 79.219 1.00 45.60 C
ATOM 16 N7 A B1393 50.107 168.939 79.177 1.00 46.70 N
ATOM 17 C5 A B1393 51.385 169.468 79.085 1.00 46.31 C
ATOM 18 C6 A B1393 52.652 168.861 79.020 1.00 46.74 C
ATOM 19 N6 A B1393 52.834 167.536 79.047 1.00 46.96 N
ATOM 20 N1 A B1393 53.732 169.667 78.929 1.00 45.28 N
ATOM 21 C2 A B1393 53.537 170.998 78.912 1.00 46.20 C
ATOM 22 N3 A B1393 52.394 171.687 78.976 1.00 44.60 N
ATOM 23 C4 A B1393 51.342 170.852 79.064 1.00 45.34 C
ATOM 24 P U B1394 46.478 173.369 75.645 1.00 41.40 P
ATOM 25 OP1 U B1394 45.039 173.512 75.295 1.00 42.66 O
ATOM 26 OP2 U B1394 47.237 172.194 75.156 1.00 40.46 O
ATOM 27 O5' U B1394 47.259 174.684 75.201 1.00 44.09 O
TER

Atoms:
C4: (45.462,177.808,79.496)
N3: (45.702,178.974,78.798)
OP1: (45.039,173.512,75.295)
OP2: (47.237,172.194,75.156)
C2: (46.390,179.102,77.618)
C1': (47.638,177.990,75.839)
C3': (49.063,176.854,74.338)
O5': (47.259,174.684,75.201)
O4': (46.813,177.451,74.828)
C5': (47.103,175.257,73.892)
P: (46.478,173.369,75.645)
C4': (47.613,176.676,73.893)
C2': (48.929,177.172,75.822)
O2': (50.026,177.907,76.342)
N1: (46.896,177.923,77.105)
O4: (44.809,177.851,80.537)
O2: (46.533,180.176,77.070)
C6: (46.705,176.725,77.763)
C5: (46.020,176.631,78.907)
O3': (49.636,177.948,73.648)
OP1: (43.925,169.726,79.840)
OP2: (45.915,168.133,79.485)
C3': (47.421,172.649,77.997)
C1': (49.427,172.522,79.242)
C5': (45.997,171.937,79.956)
O4': (48.342,172.468,80.154)
C8: (49.332,169.992,79.219)
O2': (49.049,174.466,77.914)
C6: (52.652,168.861,79.020)
C5: (51.385,169.468,79.085)
C4: (51.342,170.852,79.064)
P: (45.352,169.380,80.072)
C4': (47.111,172.822,79.472)
C2': (48.884,173.065,77.916)
C2: (53.537,170.998,78.912)
N1: (53.732,169.667,78.929)
N3: (52.394,171.687,78.976)
N6: (52.834,167.536,79.047)
N7: (50.107,168.939,79.177)
N9: (50.011,171.183,79.169)
O5': (46.261,170.581,79.564)
O3': (46.529,173.465,77.249)
Image (generated by PyMOL):
PyMOL image
show in jmol