Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X11:X10
Extra
PDB:
ATOM 1 O3' A A 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 2 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 3 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 4 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 5 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
ATOM 6 C5' U A 11 9.011 -4.174 26.250 1.00 50.30 C
ATOM 7 C4' U A 11 7.980 -3.254 25.627 1.00 50.58 C
ATOM 8 O4' U A 11 7.317 -3.921 24.516 1.00 50.31 O
ATOM 9 C3' U A 11 6.834 -2.905 26.558 1.00 50.64 C
ATOM 10 O3' U A 11 7.195 -1.869 27.447 1.00 51.70 O
ATOM 11 C2' U A 11 5.755 -2.493 25.561 1.00 50.45 C
ATOM 12 O2' U A 11 5.905 -1.180 25.045 1.00 50.38 O
ATOM 13 C1' U A 11 5.946 -3.559 24.480 1.00 49.87 C
ATOM 14 N1 U A 11 5.054 -4.768 24.683 1.00 49.74 N
ATOM 15 C2 U A 11 3.692 -4.647 24.454 1.00 49.48 C
ATOM 16 O2 U A 11 3.159 -3.619 24.086 1.00 49.71 O
ATOM 17 N3 U A 11 2.952 -5.787 24.667 1.00 49.48 N
ATOM 18 C4 U A 11 3.416 -7.024 25.076 1.00 49.62 C
ATOM 19 O4 U A 11 2.617 -7.946 25.225 1.00 49.21 O
ATOM 20 C5 U A 11 4.844 -7.088 25.295 1.00 49.77 C
ATOM 21 C6 U A 11 5.586 -5.984 25.096 1.00 50.11 C
ATOM 22 P C A 12 6.673 -1.905 28.963 1.00 52.73 P
ATOM 23 OP1 C A 12 7.216 -0.705 29.643 1.00 53.29 O
ATOM 24 OP2 C A 12 6.960 -3.243 29.519 1.00 52.84 O
ATOM 25 O5' C A 12 5.091 -1.713 28.817 1.00 53.93 O
TER
ATOM 1 O3' A B 9 11.203 -3.257 21.831 1.00 50.64 O
ATOM 2 P A B 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 3 OP1 A B 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 4 OP2 A B 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 5 O5' A B 10 10.212 -5.561 21.924 1.00 51.76 O
ATOM 6 C5' A B 10 9.544 -5.812 23.140 1.00 50.65 C
ATOM 7 C4' A B 10 9.088 -7.252 23.239 1.00 49.91 C
ATOM 8 O4' A B 10 9.605 -8.057 22.150 1.00 50.29 O
ATOM 9 C3' A B 10 9.591 -7.939 24.489 1.00 49.78 C
ATOM 10 O3' A B 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 11 C2' A B 10 9.532 -9.407 24.096 1.00 50.04 C
ATOM 12 O2' A B 10 8.229 -9.937 24.223 1.00 49.26 O
ATOM 13 C1' A B 10 9.945 -9.355 22.624 1.00 50.12 C
ATOM 14 N9 A B 10 11.367 -9.624 22.352 1.00 49.64 N
ATOM 15 C8 A B 10 12.271 -8.745 21.813 1.00 49.75 C
ATOM 16 N7 A B 10 13.478 -9.240 21.663 1.00 49.85 N
ATOM 17 C5 A B 10 13.365 -10.539 22.135 1.00 49.69 C
ATOM 18 C6 A B 10 14.298 -11.602 22.249 1.00 50.17 C
ATOM 19 N6 A B 10 15.577 -11.498 21.872 1.00 49.99 N
ATOM 20 N1 A B 10 13.870 -12.782 22.761 1.00 49.75 N
ATOM 21 C2 A B 10 12.587 -12.882 23.137 1.00 49.73 C
ATOM 22 N3 A B 10 11.621 -11.958 23.073 1.00 50.00 N
ATOM 23 C4 A B 10 12.071 -10.794 22.562 1.00 49.30 C
ATOM 24 P U B 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 25 OP1 U B 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 26 OP2 U B 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 27 O5' U B 11 8.383 -5.409 26.585 1.00 50.26 O
TER
ATOM 2 P U A 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 3 OP1 U A 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 4 OP2 U A 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 5 O5' U A 11 8.383 -5.409 26.585 1.00 50.26 O
ATOM 6 C5' U A 11 9.011 -4.174 26.250 1.00 50.30 C
ATOM 7 C4' U A 11 7.980 -3.254 25.627 1.00 50.58 C
ATOM 8 O4' U A 11 7.317 -3.921 24.516 1.00 50.31 O
ATOM 9 C3' U A 11 6.834 -2.905 26.558 1.00 50.64 C
ATOM 10 O3' U A 11 7.195 -1.869 27.447 1.00 51.70 O
ATOM 11 C2' U A 11 5.755 -2.493 25.561 1.00 50.45 C
ATOM 12 O2' U A 11 5.905 -1.180 25.045 1.00 50.38 O
ATOM 13 C1' U A 11 5.946 -3.559 24.480 1.00 49.87 C
ATOM 14 N1 U A 11 5.054 -4.768 24.683 1.00 49.74 N
ATOM 15 C2 U A 11 3.692 -4.647 24.454 1.00 49.48 C
ATOM 16 O2 U A 11 3.159 -3.619 24.086 1.00 49.71 O
ATOM 17 N3 U A 11 2.952 -5.787 24.667 1.00 49.48 N
ATOM 18 C4 U A 11 3.416 -7.024 25.076 1.00 49.62 C
ATOM 19 O4 U A 11 2.617 -7.946 25.225 1.00 49.21 O
ATOM 20 C5 U A 11 4.844 -7.088 25.295 1.00 49.77 C
ATOM 21 C6 U A 11 5.586 -5.984 25.096 1.00 50.11 C
ATOM 22 P C A 12 6.673 -1.905 28.963 1.00 52.73 P
ATOM 23 OP1 C A 12 7.216 -0.705 29.643 1.00 53.29 O
ATOM 24 OP2 C A 12 6.960 -3.243 29.519 1.00 52.84 O
ATOM 25 O5' C A 12 5.091 -1.713 28.817 1.00 53.93 O
TER
ATOM 1 O3' A B 9 11.203 -3.257 21.831 1.00 50.64 O
ATOM 2 P A B 10 11.622 -4.805 21.851 1.00 51.06 P
ATOM 3 OP1 A B 10 12.379 -5.059 23.091 1.00 52.18 O
ATOM 4 OP2 A B 10 12.229 -5.154 20.547 1.00 51.75 O
ATOM 5 O5' A B 10 10.212 -5.561 21.924 1.00 51.76 O
ATOM 6 C5' A B 10 9.544 -5.812 23.140 1.00 50.65 C
ATOM 7 C4' A B 10 9.088 -7.252 23.239 1.00 49.91 C
ATOM 8 O4' A B 10 9.605 -8.057 22.150 1.00 50.29 O
ATOM 9 C3' A B 10 9.591 -7.939 24.489 1.00 49.78 C
ATOM 10 O3' A B 10 8.703 -7.640 25.544 1.00 50.04 O
ATOM 11 C2' A B 10 9.532 -9.407 24.096 1.00 50.04 C
ATOM 12 O2' A B 10 8.229 -9.937 24.223 1.00 49.26 O
ATOM 13 C1' A B 10 9.945 -9.355 22.624 1.00 50.12 C
ATOM 14 N9 A B 10 11.367 -9.624 22.352 1.00 49.64 N
ATOM 15 C8 A B 10 12.271 -8.745 21.813 1.00 49.75 C
ATOM 16 N7 A B 10 13.478 -9.240 21.663 1.00 49.85 N
ATOM 17 C5 A B 10 13.365 -10.539 22.135 1.00 49.69 C
ATOM 18 C6 A B 10 14.298 -11.602 22.249 1.00 50.17 C
ATOM 19 N6 A B 10 15.577 -11.498 21.872 1.00 49.99 N
ATOM 20 N1 A B 10 13.870 -12.782 22.761 1.00 49.75 N
ATOM 21 C2 A B 10 12.587 -12.882 23.137 1.00 49.73 C
ATOM 22 N3 A B 10 11.621 -11.958 23.073 1.00 50.00 N
ATOM 23 C4 A B 10 12.071 -10.794 22.562 1.00 49.30 C
ATOM 24 P U B 11 9.205 -6.763 26.778 1.00 49.72 P
ATOM 25 OP1 U B 11 10.653 -6.493 26.608 1.00 49.51 O
ATOM 26 OP2 U B 11 8.724 -7.422 28.011 1.00 50.12 O
ATOM 27 O5' U B 11 8.383 -5.409 26.585 1.00 50.26 O
TER
Atoms:
C4: (3.416,-7.024,25.076)
N3: (2.952,-5.787,24.667)
OP1: (10.653,-6.493,26.608)
OP2: (8.724,-7.422,28.011)
C2: (3.692,-4.647,24.454)
C1': (5.946,-3.559,24.480)
C3': (6.834,-2.905,26.558)
O5': (8.383,-5.409,26.585)
O4': (7.317,-3.921,24.516)
C5': (9.011,-4.174,26.250)
P: (9.205,-6.763,26.778)
C4': (7.980,-3.254,25.627)
C2': (5.755,-2.493,25.561)
O2': (5.905,-1.180,25.045)
N1: (5.054,-4.768,24.683)
O4: (2.617,-7.946,25.225)
O2: (3.159,-3.619,24.086)
C6: (5.586,-5.984,25.096)
C5: (4.844,-7.088,25.295)
O3': (7.195,-1.869,27.447)
N3: (2.952,-5.787,24.667)
OP1: (10.653,-6.493,26.608)
OP2: (8.724,-7.422,28.011)
C2: (3.692,-4.647,24.454)
C1': (5.946,-3.559,24.480)
C3': (6.834,-2.905,26.558)
O5': (8.383,-5.409,26.585)
O4': (7.317,-3.921,24.516)
C5': (9.011,-4.174,26.250)
P: (9.205,-6.763,26.778)
C4': (7.980,-3.254,25.627)
C2': (5.755,-2.493,25.561)
O2': (5.905,-1.180,25.045)
N1: (5.054,-4.768,24.683)
O4: (2.617,-7.946,25.225)
O2: (3.159,-3.619,24.086)
C6: (5.586,-5.984,25.096)
C5: (4.844,-7.088,25.295)
O3': (7.195,-1.869,27.447)
OP1: (12.379,-5.059,23.091)
OP2: (12.229,-5.154,20.547)
C3': (9.591,-7.939,24.489)
C1': (9.945,-9.355,22.624)
C5': (9.544,-5.812,23.140)
O4': (9.605,-8.057,22.150)
C8: (12.271,-8.745,21.813)
O2': (8.229,-9.937,24.223)
C6: (14.298,-11.602,22.249)
C5: (13.365,-10.539,22.135)
C4: (12.071,-10.794,22.562)
P: (11.622,-4.805,21.851)
C4': (9.088,-7.252,23.239)
C2': (9.532,-9.407,24.096)
C2: (12.587,-12.882,23.137)
N1: (13.870,-12.782,22.761)
N3: (11.621,-11.958,23.073)
N6: (15.577,-11.498,21.872)
N7: (13.478,-9.240,21.663)
N9: (11.367,-9.624,22.352)
O5': (10.212,-5.561,21.924)
O3': (8.703,-7.640,25.544)
OP2: (12.229,-5.154,20.547)
C3': (9.591,-7.939,24.489)
C1': (9.945,-9.355,22.624)
C5': (9.544,-5.812,23.140)
O4': (9.605,-8.057,22.150)
C8: (12.271,-8.745,21.813)
O2': (8.229,-9.937,24.223)
C6: (14.298,-11.602,22.249)
C5: (13.365,-10.539,22.135)
C4: (12.071,-10.794,22.562)
P: (11.622,-4.805,21.851)
C4': (9.088,-7.252,23.239)
C2': (9.532,-9.407,24.096)
C2: (12.587,-12.882,23.137)
N1: (13.870,-12.782,22.761)
N3: (11.621,-11.958,23.073)
N6: (15.577,-11.498,21.872)
N7: (13.478,-9.240,21.663)
N9: (11.367,-9.624,22.352)
O5': (10.212,-5.561,21.924)
O3': (8.703,-7.640,25.544)
Image (generated by PyMOL):