Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDH:R6:R5
Extra
PDB:
ATOM 1 O3' A A 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 2 P U A 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 3 OP1 U A 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 4 OP2 U A 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 5 O5' U A 6 25.502 103.446 21.189 0.60 48.92 O
ATOM 6 C5' U A 6 25.655 104.433 20.141 0.60 49.43 C
ATOM 7 C4' U A 6 24.657 104.175 19.030 0.60 50.47 C
ATOM 8 O4' U A 6 25.053 103.002 18.244 0.60 49.91 O
ATOM 9 C3' U A 6 23.216 103.923 19.484 0.60 50.96 C
ATOM 10 O3' U A 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 11 C2' U A 6 23.100 102.397 19.372 0.60 50.12 C
ATOM 12 O2' U A 6 21.786 101.896 19.226 0.60 50.23 O
ATOM 13 C1' U A 6 23.943 102.135 18.125 0.60 48.17 C
ATOM 14 N1 U A 6 24.404 100.762 17.864 0.00 44.45 N
ATOM 15 C2 U A 6 24.382 100.338 16.543 0.00 43.06 C
ATOM 16 O2 U A 6 24.017 101.050 15.623 0.00 42.42 O
ATOM 17 N3 U A 6 24.802 99.048 16.339 0.00 42.08 N
ATOM 18 C4 U A 6 25.235 98.155 17.293 0.00 41.43 C
ATOM 19 O4 U A 6 25.567 97.018 16.951 0.00 40.13 O
ATOM 20 C5 U A 6 25.237 98.666 18.634 0.00 41.68 C
ATOM 21 C6 U A 6 24.830 99.924 18.867 0.00 43.35 C
ATOM 22 P C A 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 23 OP1 C A 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 24 OP2 C A 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 25 O5' C A 7 20.719 105.080 20.438 0.60 54.41 O
TER
ATOM 1 O3' G B 4 27.619 98.582 27.465 0.60 49.92 O
ATOM 2 P A B 5 27.614 100.174 27.194 0.60 47.98 P
ATOM 3 OP1 A B 5 28.975 100.627 26.772 0.60 46.27 O
ATOM 4 OP2 A B 5 26.950 100.809 28.383 0.60 47.99 O
ATOM 5 O5' A B 5 26.665 100.314 25.924 0.60 48.87 O
ATOM 6 C5' A B 5 26.894 99.460 24.784 0.60 50.06 C
ATOM 7 C4' A B 5 25.791 99.612 23.778 0.60 50.52 C
ATOM 8 O4' A B 5 24.540 99.124 24.333 0.60 50.59 O
ATOM 9 C3' A B 5 25.516 101.048 23.386 0.60 50.12 C
ATOM 10 O3' A B 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 11 C2' A B 5 24.049 101.016 22.965 0.60 49.93 C
ATOM 12 O2' A B 5 23.857 100.595 21.632 0.60 50.48 O
ATOM 13 C1' A B 5 23.468 99.937 23.890 0.60 50.04 C
ATOM 14 N9 A B 5 22.815 100.485 25.079 0.60 48.40 N
ATOM 15 C8 A B 5 23.293 100.523 26.366 0.60 48.44 C
ATOM 16 N7 A B 5 22.465 101.070 27.226 0.60 49.57 N
ATOM 17 C5 A B 5 21.377 101.422 26.454 0.60 48.91 C
ATOM 18 C6 A B 5 20.158 102.058 26.765 0.60 49.12 C
ATOM 19 N6 A B 5 19.864 102.487 28.001 0.60 49.94 N
ATOM 20 N1 A B 5 19.258 102.240 25.762 0.60 49.59 N
ATOM 21 C2 A B 5 19.590 101.831 24.523 0.60 49.06 C
ATOM 22 N3 A B 5 20.714 101.246 24.105 0.60 48.55 N
ATOM 23 C4 A B 5 21.563 101.069 25.124 0.60 48.21 C
ATOM 24 P U B 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 25 OP1 U B 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 26 OP2 U B 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 27 O5' U B 6 25.502 103.446 21.189 0.60 48.92 O
TER
ATOM 2 P U A 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 3 OP1 U A 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 4 OP2 U A 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 5 O5' U A 6 25.502 103.446 21.189 0.60 48.92 O
ATOM 6 C5' U A 6 25.655 104.433 20.141 0.60 49.43 C
ATOM 7 C4' U A 6 24.657 104.175 19.030 0.60 50.47 C
ATOM 8 O4' U A 6 25.053 103.002 18.244 0.60 49.91 O
ATOM 9 C3' U A 6 23.216 103.923 19.484 0.60 50.96 C
ATOM 10 O3' U A 6 22.324 104.560 18.552 0.60 53.94 O
ATOM 11 C2' U A 6 23.100 102.397 19.372 0.60 50.12 C
ATOM 12 O2' U A 6 21.786 101.896 19.226 0.60 50.23 O
ATOM 13 C1' U A 6 23.943 102.135 18.125 0.60 48.17 C
ATOM 14 N1 U A 6 24.404 100.762 17.864 0.00 44.45 N
ATOM 15 C2 U A 6 24.382 100.338 16.543 0.00 43.06 C
ATOM 16 O2 U A 6 24.017 101.050 15.623 0.00 42.42 O
ATOM 17 N3 U A 6 24.802 99.048 16.339 0.00 42.08 N
ATOM 18 C4 U A 6 25.235 98.155 17.293 0.00 41.43 C
ATOM 19 O4 U A 6 25.567 97.018 16.951 0.00 40.13 O
ATOM 20 C5 U A 6 25.237 98.666 18.634 0.00 41.68 C
ATOM 21 C6 U A 6 24.830 99.924 18.867 0.00 43.35 C
ATOM 22 P C A 7 21.271 105.687 19.065 0.60 56.70 P
ATOM 23 OP1 C A 7 20.119 105.711 18.083 0.60 58.17 O
ATOM 24 OP2 C A 7 22.002 106.970 19.366 0.60 54.61 O
ATOM 25 O5' C A 7 20.719 105.080 20.438 0.60 54.41 O
TER
ATOM 1 O3' G B 4 27.619 98.582 27.465 0.60 49.92 O
ATOM 2 P A B 5 27.614 100.174 27.194 0.60 47.98 P
ATOM 3 OP1 A B 5 28.975 100.627 26.772 0.60 46.27 O
ATOM 4 OP2 A B 5 26.950 100.809 28.383 0.60 47.99 O
ATOM 5 O5' A B 5 26.665 100.314 25.924 0.60 48.87 O
ATOM 6 C5' A B 5 26.894 99.460 24.784 0.60 50.06 C
ATOM 7 C4' A B 5 25.791 99.612 23.778 0.60 50.52 C
ATOM 8 O4' A B 5 24.540 99.124 24.333 0.60 50.59 O
ATOM 9 C3' A B 5 25.516 101.048 23.386 0.60 50.12 C
ATOM 10 O3' A B 5 26.409 101.393 22.331 0.60 48.40 O
ATOM 11 C2' A B 5 24.049 101.016 22.965 0.60 49.93 C
ATOM 12 O2' A B 5 23.857 100.595 21.632 0.60 50.48 O
ATOM 13 C1' A B 5 23.468 99.937 23.890 0.60 50.04 C
ATOM 14 N9 A B 5 22.815 100.485 25.079 0.60 48.40 N
ATOM 15 C8 A B 5 23.293 100.523 26.366 0.60 48.44 C
ATOM 16 N7 A B 5 22.465 101.070 27.226 0.60 49.57 N
ATOM 17 C5 A B 5 21.377 101.422 26.454 0.60 48.91 C
ATOM 18 C6 A B 5 20.158 102.058 26.765 0.60 49.12 C
ATOM 19 N6 A B 5 19.864 102.487 28.001 0.60 49.94 N
ATOM 20 N1 A B 5 19.258 102.240 25.762 0.60 49.59 N
ATOM 21 C2 A B 5 19.590 101.831 24.523 0.60 49.06 C
ATOM 22 N3 A B 5 20.714 101.246 24.105 0.60 48.55 N
ATOM 23 C4 A B 5 21.563 101.069 25.124 0.60 48.21 C
ATOM 24 P U B 6 26.752 102.938 22.049 0.60 48.10 P
ATOM 25 OP1 U B 6 27.986 102.972 21.186 0.60 48.00 O
ATOM 26 OP2 U B 6 26.750 103.643 23.385 0.60 46.90 O
ATOM 27 O5' U B 6 25.502 103.446 21.189 0.60 48.92 O
TER
Atoms:
C4: (25.235,98.155,17.293)
N3: (24.802,99.048,16.339)
OP1: (27.986,102.972,21.186)
OP2: (26.750,103.643,23.385)
C2: (24.382,100.338,16.543)
C1': (23.943,102.135,18.125)
C3': (23.216,103.923,19.484)
O5': (25.502,103.446,21.189)
O4': (25.053,103.002,18.244)
C5': (25.655,104.433,20.141)
P: (26.752,102.938,22.049)
C4': (24.657,104.175,19.030)
C2': (23.100,102.397,19.372)
O2': (21.786,101.896,19.226)
N1: (24.404,100.762,17.864)
O4: (25.567,97.018,16.951)
O2: (24.017,101.050,15.623)
C6: (24.830,99.924,18.867)
C5: (25.237,98.666,18.634)
O3': (22.324,104.560,18.552)
N3: (24.802,99.048,16.339)
OP1: (27.986,102.972,21.186)
OP2: (26.750,103.643,23.385)
C2: (24.382,100.338,16.543)
C1': (23.943,102.135,18.125)
C3': (23.216,103.923,19.484)
O5': (25.502,103.446,21.189)
O4': (25.053,103.002,18.244)
C5': (25.655,104.433,20.141)
P: (26.752,102.938,22.049)
C4': (24.657,104.175,19.030)
C2': (23.100,102.397,19.372)
O2': (21.786,101.896,19.226)
N1: (24.404,100.762,17.864)
O4: (25.567,97.018,16.951)
O2: (24.017,101.050,15.623)
C6: (24.830,99.924,18.867)
C5: (25.237,98.666,18.634)
O3': (22.324,104.560,18.552)
OP1: (28.975,100.627,26.772)
OP2: (26.950,100.809,28.383)
C3': (25.516,101.048,23.386)
C1': (23.468,99.937,23.890)
C5': (26.894,99.460,24.784)
O4': (24.540,99.124,24.333)
C8: (23.293,100.523,26.366)
O2': (23.857,100.595,21.632)
C6: (20.158,102.058,26.765)
C5: (21.377,101.422,26.454)
C4: (21.563,101.069,25.124)
P: (27.614,100.174,27.194)
C4': (25.791,99.612,23.778)
C2': (24.049,101.016,22.965)
C2: (19.590,101.831,24.523)
N1: (19.258,102.240,25.762)
N3: (20.714,101.246,24.105)
N6: (19.864,102.487,28.001)
N7: (22.465,101.070,27.226)
N9: (22.815,100.485,25.079)
O5': (26.665,100.314,25.924)
O3': (26.409,101.393,22.331)
OP2: (26.950,100.809,28.383)
C3': (25.516,101.048,23.386)
C1': (23.468,99.937,23.890)
C5': (26.894,99.460,24.784)
O4': (24.540,99.124,24.333)
C8: (23.293,100.523,26.366)
O2': (23.857,100.595,21.632)
C6: (20.158,102.058,26.765)
C5: (21.377,101.422,26.454)
C4: (21.563,101.069,25.124)
P: (27.614,100.174,27.194)
C4': (25.791,99.612,23.778)
C2': (24.049,101.016,22.965)
C2: (19.590,101.831,24.523)
N1: (19.258,102.240,25.762)
N3: (20.714,101.246,24.105)
N6: (19.864,102.487,28.001)
N7: (22.465,101.070,27.226)
N9: (22.815,100.485,25.079)
O5': (26.665,100.314,25.924)
O3': (26.409,101.393,22.331)
Image (generated by PyMOL):