Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDH:S6:S5
Extra
PDB:
ATOM 1 O3' A A 5 -14.558 104.533 -0.423 0.60 46.55 O
ATOM 2 P U A 6 -14.952 106.058 -0.109 0.60 47.50 P
ATOM 3 OP1 U A 6 -16.272 106.267 -0.768 0.60 47.38 O
ATOM 4 OP2 U A 6 -13.799 106.972 -0.463 0.60 47.17 O
ATOM 5 O5' U A 6 -15.140 106.064 1.476 0.60 47.24 O
ATOM 6 C5' U A 6 -15.973 107.048 2.112 0.60 47.21 C
ATOM 7 C4' U A 6 -16.441 106.512 3.435 0.60 47.58 C
ATOM 8 O4' U A 6 -17.310 105.367 3.196 0.60 46.91 O
ATOM 9 C3' U A 6 -15.300 106.005 4.304 0.60 48.04 C
ATOM 10 O3' U A 6 -15.675 106.220 5.675 0.60 50.68 O
ATOM 11 C2' U A 6 -15.272 104.508 3.956 0.60 48.11 C
ATOM 12 O2' U A 6 -14.671 103.709 4.958 0.60 50.48 O
ATOM 13 C1' U A 6 -16.765 104.205 3.787 0.60 45.33 C
ATOM 14 N1 U A 6 -17.142 103.055 2.945 0.00 42.48 N
ATOM 15 C2 U A 6 -18.046 102.145 3.476 0.00 41.36 C
ATOM 16 O2 U A 6 -18.506 102.243 4.603 0.00 41.15 O
ATOM 17 N3 U A 6 -18.393 101.112 2.640 0.00 39.60 N
ATOM 18 C4 U A 6 -17.935 100.894 1.357 0.00 39.33 C
ATOM 19 O4 U A 6 -18.342 99.917 0.727 0.00 38.13 O
ATOM 20 C5 U A 6 -16.997 101.870 0.884 0.00 39.97 C
ATOM 21 C6 U A 6 -16.640 102.891 1.676 0.00 41.06 C
ATOM 22 P C A 7 -14.909 107.341 6.566 0.60 53.40 P
ATOM 23 OP1 C A 7 -15.187 106.950 7.995 0.60 55.40 O
ATOM 24 OP2 C A 7 -15.287 108.728 6.106 0.60 50.82 O
ATOM 25 O5' C A 7 -13.349 107.049 6.325 0.60 52.51 O
TER
ATOM 1 O3' G B 4 -10.950 103.086 -4.980 0.60 41.98 O
ATOM 2 P A B 5 -11.249 104.565 -4.392 0.60 42.67 P
ATOM 3 OP1 A B 5 -12.300 105.254 -5.195 0.60 39.67 O
ATOM 4 OP2 A B 5 -9.905 105.236 -4.202 0.60 42.84 O
ATOM 5 O5' A B 5 -11.852 104.271 -2.946 0.60 43.01 O
ATOM 6 C5' A B 5 -12.845 103.231 -2.777 0.60 45.06 C
ATOM 7 C4' A B 5 -13.020 102.911 -1.316 0.60 46.44 C
ATOM 8 O4' A B 5 -11.833 102.251 -0.795 0.60 46.52 O
ATOM 9 C3' A B 5 -13.197 104.149 -0.447 0.60 47.20 C
ATOM 10 O3' A B 5 -14.558 104.533 -0.423 0.60 46.55 O
ATOM 11 C2' A B 5 -12.673 103.704 0.916 0.60 46.83 C
ATOM 12 O2' A B 5 -13.672 103.110 1.723 0.60 46.56 O
ATOM 13 C1' A B 5 -11.579 102.703 0.519 0.60 45.94 C
ATOM 14 N9 A B 5 -10.244 103.302 0.555 0.60 44.53 N
ATOM 15 C8 A B 5 -9.378 103.638 -0.458 0.60 43.66 C
ATOM 16 N7 A B 5 -8.272 104.213 -0.033 0.60 43.42 N
ATOM 17 C5 A B 5 -8.427 104.246 1.351 0.60 44.54 C
ATOM 18 C6 A B 5 -7.623 104.747 2.401 0.60 45.16 C
ATOM 19 N6 A B 5 -6.453 105.372 2.215 0.60 46.76 N
ATOM 20 N1 A B 5 -8.074 104.591 3.671 0.60 45.83 N
ATOM 21 C2 A B 5 -9.258 104.000 3.863 0.60 45.57 C
ATOM 22 N3 A B 5 -10.109 103.511 2.965 0.60 45.39 N
ATOM 23 C4 A B 5 -9.629 103.668 1.721 0.60 44.88 C
ATOM 24 P U B 6 -14.952 106.058 -0.109 0.60 47.50 P
ATOM 25 OP1 U B 6 -16.272 106.267 -0.768 0.60 47.38 O
ATOM 26 OP2 U B 6 -13.799 106.972 -0.463 0.60 47.17 O
ATOM 27 O5' U B 6 -15.140 106.064 1.476 0.60 47.24 O
TER
ATOM 2 P U A 6 -14.952 106.058 -0.109 0.60 47.50 P
ATOM 3 OP1 U A 6 -16.272 106.267 -0.768 0.60 47.38 O
ATOM 4 OP2 U A 6 -13.799 106.972 -0.463 0.60 47.17 O
ATOM 5 O5' U A 6 -15.140 106.064 1.476 0.60 47.24 O
ATOM 6 C5' U A 6 -15.973 107.048 2.112 0.60 47.21 C
ATOM 7 C4' U A 6 -16.441 106.512 3.435 0.60 47.58 C
ATOM 8 O4' U A 6 -17.310 105.367 3.196 0.60 46.91 O
ATOM 9 C3' U A 6 -15.300 106.005 4.304 0.60 48.04 C
ATOM 10 O3' U A 6 -15.675 106.220 5.675 0.60 50.68 O
ATOM 11 C2' U A 6 -15.272 104.508 3.956 0.60 48.11 C
ATOM 12 O2' U A 6 -14.671 103.709 4.958 0.60 50.48 O
ATOM 13 C1' U A 6 -16.765 104.205 3.787 0.60 45.33 C
ATOM 14 N1 U A 6 -17.142 103.055 2.945 0.00 42.48 N
ATOM 15 C2 U A 6 -18.046 102.145 3.476 0.00 41.36 C
ATOM 16 O2 U A 6 -18.506 102.243 4.603 0.00 41.15 O
ATOM 17 N3 U A 6 -18.393 101.112 2.640 0.00 39.60 N
ATOM 18 C4 U A 6 -17.935 100.894 1.357 0.00 39.33 C
ATOM 19 O4 U A 6 -18.342 99.917 0.727 0.00 38.13 O
ATOM 20 C5 U A 6 -16.997 101.870 0.884 0.00 39.97 C
ATOM 21 C6 U A 6 -16.640 102.891 1.676 0.00 41.06 C
ATOM 22 P C A 7 -14.909 107.341 6.566 0.60 53.40 P
ATOM 23 OP1 C A 7 -15.187 106.950 7.995 0.60 55.40 O
ATOM 24 OP2 C A 7 -15.287 108.728 6.106 0.60 50.82 O
ATOM 25 O5' C A 7 -13.349 107.049 6.325 0.60 52.51 O
TER
ATOM 1 O3' G B 4 -10.950 103.086 -4.980 0.60 41.98 O
ATOM 2 P A B 5 -11.249 104.565 -4.392 0.60 42.67 P
ATOM 3 OP1 A B 5 -12.300 105.254 -5.195 0.60 39.67 O
ATOM 4 OP2 A B 5 -9.905 105.236 -4.202 0.60 42.84 O
ATOM 5 O5' A B 5 -11.852 104.271 -2.946 0.60 43.01 O
ATOM 6 C5' A B 5 -12.845 103.231 -2.777 0.60 45.06 C
ATOM 7 C4' A B 5 -13.020 102.911 -1.316 0.60 46.44 C
ATOM 8 O4' A B 5 -11.833 102.251 -0.795 0.60 46.52 O
ATOM 9 C3' A B 5 -13.197 104.149 -0.447 0.60 47.20 C
ATOM 10 O3' A B 5 -14.558 104.533 -0.423 0.60 46.55 O
ATOM 11 C2' A B 5 -12.673 103.704 0.916 0.60 46.83 C
ATOM 12 O2' A B 5 -13.672 103.110 1.723 0.60 46.56 O
ATOM 13 C1' A B 5 -11.579 102.703 0.519 0.60 45.94 C
ATOM 14 N9 A B 5 -10.244 103.302 0.555 0.60 44.53 N
ATOM 15 C8 A B 5 -9.378 103.638 -0.458 0.60 43.66 C
ATOM 16 N7 A B 5 -8.272 104.213 -0.033 0.60 43.42 N
ATOM 17 C5 A B 5 -8.427 104.246 1.351 0.60 44.54 C
ATOM 18 C6 A B 5 -7.623 104.747 2.401 0.60 45.16 C
ATOM 19 N6 A B 5 -6.453 105.372 2.215 0.60 46.76 N
ATOM 20 N1 A B 5 -8.074 104.591 3.671 0.60 45.83 N
ATOM 21 C2 A B 5 -9.258 104.000 3.863 0.60 45.57 C
ATOM 22 N3 A B 5 -10.109 103.511 2.965 0.60 45.39 N
ATOM 23 C4 A B 5 -9.629 103.668 1.721 0.60 44.88 C
ATOM 24 P U B 6 -14.952 106.058 -0.109 0.60 47.50 P
ATOM 25 OP1 U B 6 -16.272 106.267 -0.768 0.60 47.38 O
ATOM 26 OP2 U B 6 -13.799 106.972 -0.463 0.60 47.17 O
ATOM 27 O5' U B 6 -15.140 106.064 1.476 0.60 47.24 O
TER
Atoms:
C4: (-17.935,100.894,1.357)
N3: (-18.393,101.112,2.640)
OP1: (-16.272,106.267,-0.768)
OP2: (-13.799,106.972,-0.463)
C2: (-18.046,102.145,3.476)
C1': (-16.765,104.205,3.787)
C3': (-15.300,106.005,4.304)
O5': (-15.140,106.064,1.476)
O4': (-17.310,105.367,3.196)
C5': (-15.973,107.048,2.112)
P: (-14.952,106.058,-0.109)
C4': (-16.441,106.512,3.435)
C2': (-15.272,104.508,3.956)
O2': (-14.671,103.709,4.958)
N1: (-17.142,103.055,2.945)
O4: (-18.342,99.917,0.727)
O2: (-18.506,102.243,4.603)
C6: (-16.640,102.891,1.676)
C5: (-16.997,101.870,0.884)
O3': (-15.675,106.220,5.675)
N3: (-18.393,101.112,2.640)
OP1: (-16.272,106.267,-0.768)
OP2: (-13.799,106.972,-0.463)
C2: (-18.046,102.145,3.476)
C1': (-16.765,104.205,3.787)
C3': (-15.300,106.005,4.304)
O5': (-15.140,106.064,1.476)
O4': (-17.310,105.367,3.196)
C5': (-15.973,107.048,2.112)
P: (-14.952,106.058,-0.109)
C4': (-16.441,106.512,3.435)
C2': (-15.272,104.508,3.956)
O2': (-14.671,103.709,4.958)
N1: (-17.142,103.055,2.945)
O4: (-18.342,99.917,0.727)
O2: (-18.506,102.243,4.603)
C6: (-16.640,102.891,1.676)
C5: (-16.997,101.870,0.884)
O3': (-15.675,106.220,5.675)
OP1: (-12.300,105.254,-5.195)
OP2: (-9.905,105.236,-4.202)
C3': (-13.197,104.149,-0.447)
C1': (-11.579,102.703,0.519)
C5': (-12.845,103.231,-2.777)
O4': (-11.833,102.251,-0.795)
C8: (-9.378,103.638,-0.458)
O2': (-13.672,103.110,1.723)
C6: (-7.623,104.747,2.401)
C5: (-8.427,104.246,1.351)
C4: (-9.629,103.668,1.721)
P: (-11.249,104.565,-4.392)
C4': (-13.020,102.911,-1.316)
C2': (-12.673,103.704,0.916)
C2: (-9.258,104.000,3.863)
N1: (-8.074,104.591,3.671)
N3: (-10.109,103.511,2.965)
N6: (-6.453,105.372,2.215)
N7: (-8.272,104.213,-0.033)
N9: (-10.244,103.302,0.555)
O5': (-11.852,104.271,-2.946)
O3': (-14.558,104.533,-0.423)
OP2: (-9.905,105.236,-4.202)
C3': (-13.197,104.149,-0.447)
C1': (-11.579,102.703,0.519)
C5': (-12.845,103.231,-2.777)
O4': (-11.833,102.251,-0.795)
C8: (-9.378,103.638,-0.458)
O2': (-13.672,103.110,1.723)
C6: (-7.623,104.747,2.401)
C5: (-8.427,104.246,1.351)
C4: (-9.629,103.668,1.721)
P: (-11.249,104.565,-4.392)
C4': (-13.020,102.911,-1.316)
C2': (-12.673,103.704,0.916)
C2: (-9.258,104.000,3.863)
N1: (-8.074,104.591,3.671)
N3: (-10.109,103.511,2.965)
N6: (-6.453,105.372,2.215)
N7: (-8.272,104.213,-0.033)
N9: (-10.244,103.302,0.555)
O5': (-11.852,104.271,-2.946)
O3': (-14.558,104.533,-0.423)
Image (generated by PyMOL):