Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01869:02075
Extra
PDB:
ATOM 1 O3' A A1868 101.848 93.270 46.122 1.00 55.43 O
ATOM 2 P C A1869 102.381 92.219 45.029 1.00 59.53 P
ATOM 3 OP1 C A1869 101.202 91.811 44.218 1.00 59.32 O
ATOM 4 OP2 C A1869 103.211 91.179 45.707 1.00 57.19 O
ATOM 5 O5' C A1869 103.341 93.086 44.101 1.00 60.39 O
ATOM 6 C5' C A1869 102.810 94.157 43.301 1.00 62.12 C
ATOM 7 C4' C A1869 103.922 94.851 42.561 1.00 62.47 C
ATOM 8 O4' C A1869 104.825 95.459 43.516 1.00 62.15 O
ATOM 9 C3' C A1869 104.816 93.949 41.732 1.00 62.95 C
ATOM 10 O3' C A1869 104.229 93.660 40.468 1.00 64.34 O
ATOM 11 C2' C A1869 106.089 94.777 41.621 1.00 62.55 C
ATOM 12 O2' C A1869 105.980 95.809 40.661 1.00 62.56 O
ATOM 13 C1' C A1869 106.150 95.409 43.012 1.00 61.74 C
ATOM 14 N1 C A1869 106.991 94.678 43.975 1.00 60.63 N
ATOM 15 C2 C A1869 108.357 94.983 44.038 1.00 60.83 C
ATOM 16 O2 C A1869 108.818 95.846 43.267 1.00 61.41 O
ATOM 17 N3 C A1869 109.139 94.332 44.935 1.00 60.07 N
ATOM 18 C4 C A1869 108.605 93.408 45.740 1.00 60.26 C
ATOM 19 N4 C A1869 109.414 92.788 46.607 1.00 60.55 N
ATOM 20 C5 C A1869 107.218 93.074 45.691 1.00 58.47 C
ATOM 21 C6 C A1869 106.457 93.725 44.803 1.00 59.60 C
ATOM 22 P A A1870 104.409 92.197 39.824 1.00 66.58 P
ATOM 23 OP1 A A1870 103.713 92.210 38.512 1.00 66.97 O
ATOM 24 OP2 A A1870 104.060 91.159 40.832 1.00 66.32 O
ATOM 25 O5' A A1870 105.970 92.099 39.547 1.00 65.63 O
TER
ATOM 1 O3' G B2074 112.960 99.843 48.151 1.00 50.22 O
ATOM 2 P U B2075 113.192 100.366 46.643 1.00 50.75 P
ATOM 3 OP1 U B2075 114.226 99.482 46.050 1.00 53.70 O
ATOM 4 OP2 U B2075 113.407 101.835 46.648 1.00 48.79 O
ATOM 5 O5' U B2075 111.816 100.053 45.906 1.00 49.75 O
ATOM 6 C5' U B2075 111.373 98.700 45.728 1.00 48.47 C
ATOM 7 C4' U B2075 110.004 98.678 45.100 1.00 49.20 C
ATOM 8 O4' U B2075 109.035 99.258 46.011 1.00 49.49 O
ATOM 9 C3' U B2075 109.848 99.504 43.838 1.00 49.15 C
ATOM 10 O3' U B2075 110.326 98.810 42.701 1.00 50.32 O
ATOM 11 C2' U B2075 108.343 99.725 43.787 1.00 48.88 C
ATOM 12 O2' U B2075 107.632 98.597 43.319 1.00 50.18 O
ATOM 13 C1' U B2075 108.027 99.930 45.268 1.00 48.09 C
ATOM 14 N1 U B2075 108.024 101.350 45.652 1.00 47.87 N
ATOM 15 C2 U B2075 106.888 102.091 45.369 1.00 47.22 C
ATOM 16 O2 U B2075 105.902 101.617 44.822 1.00 46.57 O
ATOM 17 N3 U B2075 106.949 103.408 45.748 1.00 46.30 N
ATOM 18 C4 U B2075 108.002 104.045 46.365 1.00 47.52 C
ATOM 19 O4 U B2075 107.894 105.232 46.672 1.00 48.36 O
ATOM 20 C5 U B2075 109.136 103.214 46.623 1.00 47.56 C
ATOM 21 C6 U B2075 109.110 101.930 46.268 1.00 47.09 C
ATOM 22 P C B2076 110.847 99.638 41.427 1.00 52.27 P
ATOM 23 OP1 C B2076 111.509 98.644 40.542 1.00 50.70 O
ATOM 24 OP2 C B2076 111.614 100.820 41.912 1.00 51.76 O
ATOM 25 O5' C B2076 109.516 100.158 40.718 1.00 49.41 O
TER
ATOM 2 P C A1869 102.381 92.219 45.029 1.00 59.53 P
ATOM 3 OP1 C A1869 101.202 91.811 44.218 1.00 59.32 O
ATOM 4 OP2 C A1869 103.211 91.179 45.707 1.00 57.19 O
ATOM 5 O5' C A1869 103.341 93.086 44.101 1.00 60.39 O
ATOM 6 C5' C A1869 102.810 94.157 43.301 1.00 62.12 C
ATOM 7 C4' C A1869 103.922 94.851 42.561 1.00 62.47 C
ATOM 8 O4' C A1869 104.825 95.459 43.516 1.00 62.15 O
ATOM 9 C3' C A1869 104.816 93.949 41.732 1.00 62.95 C
ATOM 10 O3' C A1869 104.229 93.660 40.468 1.00 64.34 O
ATOM 11 C2' C A1869 106.089 94.777 41.621 1.00 62.55 C
ATOM 12 O2' C A1869 105.980 95.809 40.661 1.00 62.56 O
ATOM 13 C1' C A1869 106.150 95.409 43.012 1.00 61.74 C
ATOM 14 N1 C A1869 106.991 94.678 43.975 1.00 60.63 N
ATOM 15 C2 C A1869 108.357 94.983 44.038 1.00 60.83 C
ATOM 16 O2 C A1869 108.818 95.846 43.267 1.00 61.41 O
ATOM 17 N3 C A1869 109.139 94.332 44.935 1.00 60.07 N
ATOM 18 C4 C A1869 108.605 93.408 45.740 1.00 60.26 C
ATOM 19 N4 C A1869 109.414 92.788 46.607 1.00 60.55 N
ATOM 20 C5 C A1869 107.218 93.074 45.691 1.00 58.47 C
ATOM 21 C6 C A1869 106.457 93.725 44.803 1.00 59.60 C
ATOM 22 P A A1870 104.409 92.197 39.824 1.00 66.58 P
ATOM 23 OP1 A A1870 103.713 92.210 38.512 1.00 66.97 O
ATOM 24 OP2 A A1870 104.060 91.159 40.832 1.00 66.32 O
ATOM 25 O5' A A1870 105.970 92.099 39.547 1.00 65.63 O
TER
ATOM 1 O3' G B2074 112.960 99.843 48.151 1.00 50.22 O
ATOM 2 P U B2075 113.192 100.366 46.643 1.00 50.75 P
ATOM 3 OP1 U B2075 114.226 99.482 46.050 1.00 53.70 O
ATOM 4 OP2 U B2075 113.407 101.835 46.648 1.00 48.79 O
ATOM 5 O5' U B2075 111.816 100.053 45.906 1.00 49.75 O
ATOM 6 C5' U B2075 111.373 98.700 45.728 1.00 48.47 C
ATOM 7 C4' U B2075 110.004 98.678 45.100 1.00 49.20 C
ATOM 8 O4' U B2075 109.035 99.258 46.011 1.00 49.49 O
ATOM 9 C3' U B2075 109.848 99.504 43.838 1.00 49.15 C
ATOM 10 O3' U B2075 110.326 98.810 42.701 1.00 50.32 O
ATOM 11 C2' U B2075 108.343 99.725 43.787 1.00 48.88 C
ATOM 12 O2' U B2075 107.632 98.597 43.319 1.00 50.18 O
ATOM 13 C1' U B2075 108.027 99.930 45.268 1.00 48.09 C
ATOM 14 N1 U B2075 108.024 101.350 45.652 1.00 47.87 N
ATOM 15 C2 U B2075 106.888 102.091 45.369 1.00 47.22 C
ATOM 16 O2 U B2075 105.902 101.617 44.822 1.00 46.57 O
ATOM 17 N3 U B2075 106.949 103.408 45.748 1.00 46.30 N
ATOM 18 C4 U B2075 108.002 104.045 46.365 1.00 47.52 C
ATOM 19 O4 U B2075 107.894 105.232 46.672 1.00 48.36 O
ATOM 20 C5 U B2075 109.136 103.214 46.623 1.00 47.56 C
ATOM 21 C6 U B2075 109.110 101.930 46.268 1.00 47.09 C
ATOM 22 P C B2076 110.847 99.638 41.427 1.00 52.27 P
ATOM 23 OP1 C B2076 111.509 98.644 40.542 1.00 50.70 O
ATOM 24 OP2 C B2076 111.614 100.820 41.912 1.00 51.76 O
ATOM 25 O5' C B2076 109.516 100.158 40.718 1.00 49.41 O
TER
Atoms:
C2: (108.357,94.983,44.038)
OP1: (101.202,91.811,44.218)
OP2: (103.211,91.179,45.707)
C4: (108.605,93.408,45.740)
O5': (103.341,93.086,44.101)
C3': (104.816,93.949,41.732)
C1': (106.150,95.409,43.012)
O4': (104.825,95.459,43.516)
C5': (102.810,94.157,43.301)
P: (102.381,92.219,45.029)
O2: (108.818,95.846,43.267)
C4': (103.922,94.851,42.561)
C2': (106.089,94.777,41.621)
O2': (105.980,95.809,40.661)
N1: (106.991,94.678,43.975)
N3: (109.139,94.332,44.935)
N4: (109.414,92.788,46.607)
C6: (106.457,93.725,44.803)
C5: (107.218,93.074,45.691)
O3': (104.229,93.660,40.468)
OP1: (101.202,91.811,44.218)
OP2: (103.211,91.179,45.707)
C4: (108.605,93.408,45.740)
O5': (103.341,93.086,44.101)
C3': (104.816,93.949,41.732)
C1': (106.150,95.409,43.012)
O4': (104.825,95.459,43.516)
C5': (102.810,94.157,43.301)
P: (102.381,92.219,45.029)
O2: (108.818,95.846,43.267)
C4': (103.922,94.851,42.561)
C2': (106.089,94.777,41.621)
O2': (105.980,95.809,40.661)
N1: (106.991,94.678,43.975)
N3: (109.139,94.332,44.935)
N4: (109.414,92.788,46.607)
C6: (106.457,93.725,44.803)
C5: (107.218,93.074,45.691)
O3': (104.229,93.660,40.468)
C4: (108.002,104.045,46.365)
N3: (106.949,103.408,45.748)
OP1: (114.226,99.482,46.050)
OP2: (113.407,101.835,46.648)
C2: (106.888,102.091,45.369)
C1': (108.027,99.930,45.268)
C3': (109.848,99.504,43.838)
O5': (111.816,100.053,45.906)
O4': (109.035,99.258,46.011)
C5': (111.373,98.700,45.728)
P: (113.192,100.366,46.643)
C4': (110.004,98.678,45.100)
C2': (108.343,99.725,43.787)
O2': (107.632,98.597,43.319)
N1: (108.024,101.350,45.652)
O4: (107.894,105.232,46.672)
O2: (105.902,101.617,44.822)
C6: (109.110,101.930,46.268)
C5: (109.136,103.214,46.623)
O3': (110.326,98.810,42.701)
N3: (106.949,103.408,45.748)
OP1: (114.226,99.482,46.050)
OP2: (113.407,101.835,46.648)
C2: (106.888,102.091,45.369)
C1': (108.027,99.930,45.268)
C3': (109.848,99.504,43.838)
O5': (111.816,100.053,45.906)
O4': (109.035,99.258,46.011)
C5': (111.373,98.700,45.728)
P: (113.192,100.366,46.643)
C4': (110.004,98.678,45.100)
C2': (108.343,99.725,43.787)
O2': (107.632,98.597,43.319)
N1: (108.024,101.350,45.652)
O4: (107.894,105.232,46.672)
O2: (105.902,101.617,44.822)
C6: (109.110,101.930,46.268)
C5: (109.136,103.214,46.623)
O3': (110.326,98.810,42.701)
Image (generated by PyMOL):