Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDK:R9:R8
Extra
PDB:
ATOM 1 O3' A A 8 26.360 101.477 22.247 0.50 95.42 O
ATOM 2 P U A 9 26.736 103.037 22.014 0.50 94.74 P
ATOM 3 OP1 U A 9 27.946 103.066 21.123 0.50 93.99 O
ATOM 4 OP2 U A 9 26.763 103.773 23.328 0.50 92.98 O
ATOM 5 O5' U A 9 25.490 103.597 21.191 0.50 96.15 O
ATOM 6 C5' U A 9 25.667 104.577 20.147 0.50 99.65 C
ATOM 7 C4' U A 9 24.706 104.298 19.015 0.50102.84 C
ATOM 8 O4' U A 9 25.107 103.085 18.300 0.50104.87 O
ATOM 9 C3' U A 9 23.257 104.079 19.465 0.50103.88 C
ATOM 10 O3' U A 9 22.364 104.665 18.522 0.50103.40 O
ATOM 11 C2' U A 9 23.108 102.562 19.417 0.50105.19 C
ATOM 12 O2' U A 9 21.781 102.132 19.197 0.50105.74 O
ATOM 13 C1' U A 9 24.003 102.207 18.231 0.50106.90 C
ATOM 14 N1 U A 9 24.470 100.813 18.222 0.50109.91 N
ATOM 15 C2 U A 9 24.514 100.164 16.992 0.50111.63 C
ATOM 16 O2 U A 9 24.273 100.730 15.932 0.50112.58 O
ATOM 17 N3 U A 9 24.855 98.831 17.048 0.50112.66 N
ATOM 18 C4 U A 9 25.154 98.093 18.180 0.50112.79 C
ATOM 19 O4 U A 9 25.286 96.864 18.083 0.50113.89 O
ATOM 20 C5 U A 9 25.144 98.850 19.407 0.50112.22 C
ATOM 21 C6 U A 9 24.814 100.153 19.382 0.50111.07 C
ATOM 22 P C A 10 21.147 105.594 19.040 0.50102.74 P
ATOM 23 OP1 C A 10 20.008 105.424 18.053 0.50101.94 O
ATOM 24 OP2 C A 10 21.698 106.988 19.318 0.50101.67 O
ATOM 25 O5' C A 10 20.697 104.911 20.417 0.50 97.78 O
TER
ATOM 1 O3' G B 7 27.689 98.579 27.352 0.50 89.65 O
ATOM 2 P A B 8 27.691 100.179 27.067 0.50 86.16 P
ATOM 3 OP1 A B 8 29.033 100.660 26.643 0.50 84.92 O
ATOM 4 OP2 A B 8 27.001 100.845 28.232 0.50 86.27 O
ATOM 5 O5' A B 8 26.748 100.340 25.800 0.50 88.10 O
ATOM 6 C5' A B 8 26.929 99.487 24.663 0.50 92.92 C
ATOM 7 C4' A B 8 25.774 99.645 23.708 0.50 95.83 C
ATOM 8 O4' A B 8 24.542 99.141 24.303 0.50 96.30 O
ATOM 9 C3' A B 8 25.481 101.090 23.322 0.50 96.42 C
ATOM 10 O3' A B 8 26.360 101.477 22.247 0.50 95.42 O
ATOM 11 C2' A B 8 23.993 101.042 22.953 0.50 96.91 C
ATOM 12 O2' A B 8 23.738 100.645 21.621 0.50 96.33 O
ATOM 13 C1' A B 8 23.452 99.949 23.888 0.50 96.80 C
ATOM 14 N9 A B 8 22.773 100.466 25.080 0.50 97.30 N
ATOM 15 C8 A B 8 23.251 100.499 26.376 0.50 97.67 C
ATOM 16 N7 A B 8 22.414 101.040 27.240 0.50 97.76 N
ATOM 17 C5 A B 8 21.309 101.379 26.462 0.50 97.51 C
ATOM 18 C6 A B 8 20.072 101.991 26.787 0.50 97.00 C
ATOM 19 N6 A B 8 19.757 102.402 28.025 0.50 96.48 N
ATOM 20 N1 A B 8 19.174 102.173 25.780 0.50 97.10 N
ATOM 21 C2 A B 8 19.515 101.775 24.534 0.50 96.89 C
ATOM 22 N3 A B 8 20.647 101.196 24.104 0.50 97.19 N
ATOM 23 C4 A B 8 21.511 101.025 25.129 0.50 97.55 C
ATOM 24 P U B 9 26.736 103.037 22.014 0.50 94.74 P
ATOM 25 OP1 U B 9 27.946 103.066 21.123 0.50 93.99 O
ATOM 26 OP2 U B 9 26.763 103.773 23.328 0.50 92.98 O
ATOM 27 O5' U B 9 25.490 103.597 21.191 0.50 96.15 O
TER
ATOM 2 P U A 9 26.736 103.037 22.014 0.50 94.74 P
ATOM 3 OP1 U A 9 27.946 103.066 21.123 0.50 93.99 O
ATOM 4 OP2 U A 9 26.763 103.773 23.328 0.50 92.98 O
ATOM 5 O5' U A 9 25.490 103.597 21.191 0.50 96.15 O
ATOM 6 C5' U A 9 25.667 104.577 20.147 0.50 99.65 C
ATOM 7 C4' U A 9 24.706 104.298 19.015 0.50102.84 C
ATOM 8 O4' U A 9 25.107 103.085 18.300 0.50104.87 O
ATOM 9 C3' U A 9 23.257 104.079 19.465 0.50103.88 C
ATOM 10 O3' U A 9 22.364 104.665 18.522 0.50103.40 O
ATOM 11 C2' U A 9 23.108 102.562 19.417 0.50105.19 C
ATOM 12 O2' U A 9 21.781 102.132 19.197 0.50105.74 O
ATOM 13 C1' U A 9 24.003 102.207 18.231 0.50106.90 C
ATOM 14 N1 U A 9 24.470 100.813 18.222 0.50109.91 N
ATOM 15 C2 U A 9 24.514 100.164 16.992 0.50111.63 C
ATOM 16 O2 U A 9 24.273 100.730 15.932 0.50112.58 O
ATOM 17 N3 U A 9 24.855 98.831 17.048 0.50112.66 N
ATOM 18 C4 U A 9 25.154 98.093 18.180 0.50112.79 C
ATOM 19 O4 U A 9 25.286 96.864 18.083 0.50113.89 O
ATOM 20 C5 U A 9 25.144 98.850 19.407 0.50112.22 C
ATOM 21 C6 U A 9 24.814 100.153 19.382 0.50111.07 C
ATOM 22 P C A 10 21.147 105.594 19.040 0.50102.74 P
ATOM 23 OP1 C A 10 20.008 105.424 18.053 0.50101.94 O
ATOM 24 OP2 C A 10 21.698 106.988 19.318 0.50101.67 O
ATOM 25 O5' C A 10 20.697 104.911 20.417 0.50 97.78 O
TER
ATOM 1 O3' G B 7 27.689 98.579 27.352 0.50 89.65 O
ATOM 2 P A B 8 27.691 100.179 27.067 0.50 86.16 P
ATOM 3 OP1 A B 8 29.033 100.660 26.643 0.50 84.92 O
ATOM 4 OP2 A B 8 27.001 100.845 28.232 0.50 86.27 O
ATOM 5 O5' A B 8 26.748 100.340 25.800 0.50 88.10 O
ATOM 6 C5' A B 8 26.929 99.487 24.663 0.50 92.92 C
ATOM 7 C4' A B 8 25.774 99.645 23.708 0.50 95.83 C
ATOM 8 O4' A B 8 24.542 99.141 24.303 0.50 96.30 O
ATOM 9 C3' A B 8 25.481 101.090 23.322 0.50 96.42 C
ATOM 10 O3' A B 8 26.360 101.477 22.247 0.50 95.42 O
ATOM 11 C2' A B 8 23.993 101.042 22.953 0.50 96.91 C
ATOM 12 O2' A B 8 23.738 100.645 21.621 0.50 96.33 O
ATOM 13 C1' A B 8 23.452 99.949 23.888 0.50 96.80 C
ATOM 14 N9 A B 8 22.773 100.466 25.080 0.50 97.30 N
ATOM 15 C8 A B 8 23.251 100.499 26.376 0.50 97.67 C
ATOM 16 N7 A B 8 22.414 101.040 27.240 0.50 97.76 N
ATOM 17 C5 A B 8 21.309 101.379 26.462 0.50 97.51 C
ATOM 18 C6 A B 8 20.072 101.991 26.787 0.50 97.00 C
ATOM 19 N6 A B 8 19.757 102.402 28.025 0.50 96.48 N
ATOM 20 N1 A B 8 19.174 102.173 25.780 0.50 97.10 N
ATOM 21 C2 A B 8 19.515 101.775 24.534 0.50 96.89 C
ATOM 22 N3 A B 8 20.647 101.196 24.104 0.50 97.19 N
ATOM 23 C4 A B 8 21.511 101.025 25.129 0.50 97.55 C
ATOM 24 P U B 9 26.736 103.037 22.014 0.50 94.74 P
ATOM 25 OP1 U B 9 27.946 103.066 21.123 0.50 93.99 O
ATOM 26 OP2 U B 9 26.763 103.773 23.328 0.50 92.98 O
ATOM 27 O5' U B 9 25.490 103.597 21.191 0.50 96.15 O
TER
Atoms:
C4: (25.154,98.093,18.180)
N3: (24.855,98.831,17.048)
OP1: (27.946,103.066,21.123)
OP2: (26.763,103.773,23.328)
C2: (24.514,100.164,16.992)
C1': (24.003,102.207,18.231)
C3': (23.257,104.079,19.465)
O5': (25.490,103.597,21.191)
O4': (25.107,103.085,18.300)
C5': (25.667,104.577,20.147)
P: (26.736,103.037,22.014)
C4': (24.706,104.298,19.015)
C2': (23.108,102.562,19.417)
O2': (21.781,102.132,19.197)
N1: (24.470,100.813,18.222)
O4: (25.286,96.864,18.083)
O2: (24.273,100.730,15.932)
C6: (24.814,100.153,19.382)
C5: (25.144,98.850,19.407)
O3': (22.364,104.665,18.522)
N3: (24.855,98.831,17.048)
OP1: (27.946,103.066,21.123)
OP2: (26.763,103.773,23.328)
C2: (24.514,100.164,16.992)
C1': (24.003,102.207,18.231)
C3': (23.257,104.079,19.465)
O5': (25.490,103.597,21.191)
O4': (25.107,103.085,18.300)
C5': (25.667,104.577,20.147)
P: (26.736,103.037,22.014)
C4': (24.706,104.298,19.015)
C2': (23.108,102.562,19.417)
O2': (21.781,102.132,19.197)
N1: (24.470,100.813,18.222)
O4: (25.286,96.864,18.083)
O2: (24.273,100.730,15.932)
C6: (24.814,100.153,19.382)
C5: (25.144,98.850,19.407)
O3': (22.364,104.665,18.522)
OP1: (29.033,100.660,26.643)
OP2: (27.001,100.845,28.232)
C3': (25.481,101.090,23.322)
C1': (23.452,99.949,23.888)
C5': (26.929,99.487,24.663)
O4': (24.542,99.141,24.303)
C8: (23.251,100.499,26.376)
O2': (23.738,100.645,21.621)
C6: (20.072,101.991,26.787)
C5: (21.309,101.379,26.462)
C4: (21.511,101.025,25.129)
P: (27.691,100.179,27.067)
C4': (25.774,99.645,23.708)
C2': (23.993,101.042,22.953)
C2: (19.515,101.775,24.534)
N1: (19.174,102.173,25.780)
N3: (20.647,101.196,24.104)
N6: (19.757,102.402,28.025)
N7: (22.414,101.040,27.240)
N9: (22.773,100.466,25.080)
O5': (26.748,100.340,25.800)
O3': (26.360,101.477,22.247)
OP2: (27.001,100.845,28.232)
C3': (25.481,101.090,23.322)
C1': (23.452,99.949,23.888)
C5': (26.929,99.487,24.663)
O4': (24.542,99.141,24.303)
C8: (23.251,100.499,26.376)
O2': (23.738,100.645,21.621)
C6: (20.072,101.991,26.787)
C5: (21.309,101.379,26.462)
C4: (21.511,101.025,25.129)
P: (27.691,100.179,27.067)
C4': (25.774,99.645,23.708)
C2': (23.993,101.042,22.953)
C2: (19.515,101.775,24.534)
N1: (19.174,102.173,25.780)
N3: (20.647,101.196,24.104)
N6: (19.757,102.402,28.025)
N7: (22.414,101.040,27.240)
N9: (22.773,100.466,25.080)
O5': (26.748,100.340,25.800)
O3': (26.360,101.477,22.247)
Image (generated by PyMOL):