Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZDK:S16:S15
Extra
PDB:
ATOM 1 O3' A A 15 -0.100 89.273 -4.206 0.50125.07 O
ATOM 2 P U A 16 1.029 88.410 -3.409 0.50124.51 P
ATOM 3 OP1 U A 16 0.919 86.967 -3.853 0.50124.12 O
ATOM 4 OP2 U A 16 0.925 88.746 -1.925 0.50123.85 O
ATOM 5 O5' U A 16 2.423 88.976 -3.972 0.50121.21 O
ATOM 6 C5' U A 16 2.745 88.896 -5.386 0.50115.86 C
ATOM 7 C4' U A 16 3.746 89.966 -5.747 0.50112.94 C
ATOM 8 O4' U A 16 3.146 91.273 -5.494 0.50111.47 O
ATOM 9 C3' U A 16 4.992 89.962 -4.873 0.50111.61 C
ATOM 10 O3' U A 16 6.018 89.047 -5.237 0.50110.23 O
ATOM 11 C2' U A 16 5.453 91.405 -4.941 0.50111.08 C
ATOM 12 O2' U A 16 6.214 91.682 -6.111 0.50111.74 O
ATOM 13 C1' U A 16 4.111 92.147 -4.925 0.50109.67 C
ATOM 14 N1 U A 16 3.706 92.438 -3.538 0.00107.05 N
ATOM 15 C2 U A 16 4.522 93.262 -2.773 0.00105.90 C
ATOM 16 O2 U A 16 5.540 93.779 -3.205 0.00105.11 O
ATOM 17 N3 U A 16 4.100 93.455 -1.479 0.00104.86 N
ATOM 18 C4 U A 16 2.971 92.934 -0.886 0.00104.56 C
ATOM 19 O4 U A 16 2.727 93.200 0.293 0.00104.01 O
ATOM 20 C5 U A 16 2.177 92.107 -1.741 0.00104.96 C
ATOM 21 C6 U A 16 2.561 91.894 -3.004 0.00105.96 C
ATOM 22 P G A 17 6.968 88.449 -4.072 0.50109.50 P
ATOM 23 OP1 G A 17 7.432 87.063 -4.419 0.50109.95 O
ATOM 24 OP2 G A 17 6.255 88.688 -2.759 0.50108.64 O
ATOM 25 O5' G A 17 8.235 89.402 -4.080 0.00105.43 O
TER
ATOM 1 O3' C B 14 -5.028 91.083 -0.568 0.50126.44 O
ATOM 2 P A B 15 -3.660 90.235 -0.461 0.50126.67 P
ATOM 3 OP1 A B 15 -4.074 88.802 -0.724 0.50127.31 O
ATOM 4 OP2 A B 15 -2.937 90.592 0.829 0.50126.01 O
ATOM 5 O5' A B 15 -2.766 90.747 -1.684 0.50126.32 O
ATOM 6 C5' A B 15 -3.006 90.245 -3.024 0.50125.73 C
ATOM 7 C4' A B 15 -2.000 90.824 -3.996 0.50125.16 C
ATOM 8 O4' A B 15 -2.119 92.277 -3.985 0.50124.22 O
ATOM 9 C3' A B 15 -0.524 90.548 -3.696 0.50124.90 C
ATOM 10 O3' A B 15 -0.100 89.273 -4.206 0.50125.07 O
ATOM 11 C2' A B 15 0.176 91.731 -4.370 0.50123.81 C
ATOM 12 O2' A B 15 0.394 91.594 -5.771 0.50123.32 O
ATOM 13 C1' A B 15 -0.831 92.860 -4.130 0.50122.64 C
ATOM 14 N9 A B 15 -0.518 93.555 -2.888 0.50120.33 N
ATOM 15 C8 A B 15 -1.022 93.326 -1.625 0.50119.74 C
ATOM 16 N7 A B 15 -0.523 94.119 -0.714 0.50119.62 N
ATOM 17 C5 A B 15 0.361 94.926 -1.421 0.50119.57 C
ATOM 18 C6 A B 15 1.195 95.971 -1.025 0.50119.71 C
ATOM 19 N6 A B 15 1.275 96.417 0.243 0.50119.87 N
ATOM 20 N1 A B 15 1.962 96.558 -1.985 0.50119.68 N
ATOM 21 C2 A B 15 1.875 96.114 -3.251 0.50118.95 C
ATOM 22 N3 A B 15 1.112 95.142 -3.741 0.50118.62 N
ATOM 23 C4 A B 15 0.376 94.583 -2.760 0.50119.30 C
ATOM 24 P U B 16 1.029 88.410 -3.409 0.50124.51 P
ATOM 25 OP1 U B 16 0.919 86.967 -3.853 0.50124.12 O
ATOM 26 OP2 U B 16 0.925 88.746 -1.925 0.50123.85 O
ATOM 27 O5' U B 16 2.423 88.976 -3.972 0.50121.21 O
TER
ATOM 2 P U A 16 1.029 88.410 -3.409 0.50124.51 P
ATOM 3 OP1 U A 16 0.919 86.967 -3.853 0.50124.12 O
ATOM 4 OP2 U A 16 0.925 88.746 -1.925 0.50123.85 O
ATOM 5 O5' U A 16 2.423 88.976 -3.972 0.50121.21 O
ATOM 6 C5' U A 16 2.745 88.896 -5.386 0.50115.86 C
ATOM 7 C4' U A 16 3.746 89.966 -5.747 0.50112.94 C
ATOM 8 O4' U A 16 3.146 91.273 -5.494 0.50111.47 O
ATOM 9 C3' U A 16 4.992 89.962 -4.873 0.50111.61 C
ATOM 10 O3' U A 16 6.018 89.047 -5.237 0.50110.23 O
ATOM 11 C2' U A 16 5.453 91.405 -4.941 0.50111.08 C
ATOM 12 O2' U A 16 6.214 91.682 -6.111 0.50111.74 O
ATOM 13 C1' U A 16 4.111 92.147 -4.925 0.50109.67 C
ATOM 14 N1 U A 16 3.706 92.438 -3.538 0.00107.05 N
ATOM 15 C2 U A 16 4.522 93.262 -2.773 0.00105.90 C
ATOM 16 O2 U A 16 5.540 93.779 -3.205 0.00105.11 O
ATOM 17 N3 U A 16 4.100 93.455 -1.479 0.00104.86 N
ATOM 18 C4 U A 16 2.971 92.934 -0.886 0.00104.56 C
ATOM 19 O4 U A 16 2.727 93.200 0.293 0.00104.01 O
ATOM 20 C5 U A 16 2.177 92.107 -1.741 0.00104.96 C
ATOM 21 C6 U A 16 2.561 91.894 -3.004 0.00105.96 C
ATOM 22 P G A 17 6.968 88.449 -4.072 0.50109.50 P
ATOM 23 OP1 G A 17 7.432 87.063 -4.419 0.50109.95 O
ATOM 24 OP2 G A 17 6.255 88.688 -2.759 0.50108.64 O
ATOM 25 O5' G A 17 8.235 89.402 -4.080 0.00105.43 O
TER
ATOM 1 O3' C B 14 -5.028 91.083 -0.568 0.50126.44 O
ATOM 2 P A B 15 -3.660 90.235 -0.461 0.50126.67 P
ATOM 3 OP1 A B 15 -4.074 88.802 -0.724 0.50127.31 O
ATOM 4 OP2 A B 15 -2.937 90.592 0.829 0.50126.01 O
ATOM 5 O5' A B 15 -2.766 90.747 -1.684 0.50126.32 O
ATOM 6 C5' A B 15 -3.006 90.245 -3.024 0.50125.73 C
ATOM 7 C4' A B 15 -2.000 90.824 -3.996 0.50125.16 C
ATOM 8 O4' A B 15 -2.119 92.277 -3.985 0.50124.22 O
ATOM 9 C3' A B 15 -0.524 90.548 -3.696 0.50124.90 C
ATOM 10 O3' A B 15 -0.100 89.273 -4.206 0.50125.07 O
ATOM 11 C2' A B 15 0.176 91.731 -4.370 0.50123.81 C
ATOM 12 O2' A B 15 0.394 91.594 -5.771 0.50123.32 O
ATOM 13 C1' A B 15 -0.831 92.860 -4.130 0.50122.64 C
ATOM 14 N9 A B 15 -0.518 93.555 -2.888 0.50120.33 N
ATOM 15 C8 A B 15 -1.022 93.326 -1.625 0.50119.74 C
ATOM 16 N7 A B 15 -0.523 94.119 -0.714 0.50119.62 N
ATOM 17 C5 A B 15 0.361 94.926 -1.421 0.50119.57 C
ATOM 18 C6 A B 15 1.195 95.971 -1.025 0.50119.71 C
ATOM 19 N6 A B 15 1.275 96.417 0.243 0.50119.87 N
ATOM 20 N1 A B 15 1.962 96.558 -1.985 0.50119.68 N
ATOM 21 C2 A B 15 1.875 96.114 -3.251 0.50118.95 C
ATOM 22 N3 A B 15 1.112 95.142 -3.741 0.50118.62 N
ATOM 23 C4 A B 15 0.376 94.583 -2.760 0.50119.30 C
ATOM 24 P U B 16 1.029 88.410 -3.409 0.50124.51 P
ATOM 25 OP1 U B 16 0.919 86.967 -3.853 0.50124.12 O
ATOM 26 OP2 U B 16 0.925 88.746 -1.925 0.50123.85 O
ATOM 27 O5' U B 16 2.423 88.976 -3.972 0.50121.21 O
TER
Atoms:
C4: (2.971,92.934,-0.886)
N3: (4.100,93.455,-1.479)
OP1: (0.919,86.967,-3.853)
OP2: (0.925,88.746,-1.925)
C2: (4.522,93.262,-2.773)
C1': (4.111,92.147,-4.925)
C3': (4.992,89.962,-4.873)
O5': (2.423,88.976,-3.972)
O4': (3.146,91.273,-5.494)
C5': (2.745,88.896,-5.386)
P: (1.029,88.410,-3.409)
C4': (3.746,89.966,-5.747)
C2': (5.453,91.405,-4.941)
O2': (6.214,91.682,-6.111)
N1: (3.706,92.438,-3.538)
O4: (2.727,93.200,0.293)
O2: (5.540,93.779,-3.205)
C6: (2.561,91.894,-3.004)
C5: (2.177,92.107,-1.741)
O3': (6.018,89.047,-5.237)
N3: (4.100,93.455,-1.479)
OP1: (0.919,86.967,-3.853)
OP2: (0.925,88.746,-1.925)
C2: (4.522,93.262,-2.773)
C1': (4.111,92.147,-4.925)
C3': (4.992,89.962,-4.873)
O5': (2.423,88.976,-3.972)
O4': (3.146,91.273,-5.494)
C5': (2.745,88.896,-5.386)
P: (1.029,88.410,-3.409)
C4': (3.746,89.966,-5.747)
C2': (5.453,91.405,-4.941)
O2': (6.214,91.682,-6.111)
N1: (3.706,92.438,-3.538)
O4: (2.727,93.200,0.293)
O2: (5.540,93.779,-3.205)
C6: (2.561,91.894,-3.004)
C5: (2.177,92.107,-1.741)
O3': (6.018,89.047,-5.237)
OP1: (-4.074,88.802,-0.724)
OP2: (-2.937,90.592,0.829)
C3': (-0.524,90.548,-3.696)
C1': (-0.831,92.860,-4.130)
C5': (-3.006,90.245,-3.024)
O4': (-2.119,92.277,-3.985)
C8: (-1.022,93.326,-1.625)
O2': (0.394,91.594,-5.771)
C6: (1.195,95.971,-1.025)
C5: (0.361,94.926,-1.421)
C4: (0.376,94.583,-2.760)
P: (-3.660,90.235,-0.461)
C4': (-2.000,90.824,-3.996)
C2': (0.176,91.731,-4.370)
C2: (1.875,96.114,-3.251)
N1: (1.962,96.558,-1.985)
N3: (1.112,95.142,-3.741)
N6: (1.275,96.417,0.243)
N7: (-0.523,94.119,-0.714)
N9: (-0.518,93.555,-2.888)
O5': (-2.766,90.747,-1.684)
O3': (-0.100,89.273,-4.206)
OP2: (-2.937,90.592,0.829)
C3': (-0.524,90.548,-3.696)
C1': (-0.831,92.860,-4.130)
C5': (-3.006,90.245,-3.024)
O4': (-2.119,92.277,-3.985)
C8: (-1.022,93.326,-1.625)
O2': (0.394,91.594,-5.771)
C6: (1.195,95.971,-1.025)
C5: (0.361,94.926,-1.421)
C4: (0.376,94.583,-2.760)
P: (-3.660,90.235,-0.461)
C4': (-2.000,90.824,-3.996)
C2': (0.176,91.731,-4.370)
C2: (1.875,96.114,-3.251)
N1: (1.962,96.558,-1.985)
N3: (1.112,95.142,-3.741)
N6: (1.275,96.417,0.243)
N7: (-0.523,94.119,-0.714)
N9: (-0.518,93.555,-2.888)
O5': (-2.766,90.747,-1.684)
O3': (-0.100,89.273,-4.206)
Image (generated by PyMOL):